RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 HSPA5P11021 654 aaKnown RBP23.05■■□□□ 1.28
PCDHA1-201ENST00000378133 MPHOSPH9Q99550 1183 aa23.05■■□□□ 1.28
PCDHA1-201ENST00000378133 KDM6BO15054 1643 aa23.05■■□□□ 1.28
PCDHA1-201ENST00000378133 FOXD1Q16676 465 aa23.03■■□□□ 1.28
PCDHA1-201ENST00000378133 GCC2Q8IWJ2 1684 aa23.03■■□□□ 1.28
PCDHA1-201ENST00000378133 NUP160Q12769 1436 aa23.03■■□□□ 1.28
PCDHA1-201ENST00000378133 WASHC2AQ641Q2 1341 aa23.02■■□□□ 1.28
PCDHA1-201ENST00000378133 MIA2Q96PC5 1412 aa23.02■■□□□ 1.28
PCDHA1-201ENST00000378133 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
PCDHA1-201ENST00000378133 AKNAQ7Z591 1439 aa23■■□□□ 1.27
PCDHA1-201ENST00000378133 CDK11AQ9UQ88 783 aaPredicted RBP22.99■■□□□ 1.27
PCDHA1-201ENST00000378133 CHD1O14646 1710 aa22.99■■□□□ 1.27
PCDHA1-201ENST00000378133 L3MBTL2Q969R5 705 aa22.99■■□□□ 1.27
PCDHA1-201ENST00000378133 EIF4G2P78344 907 aaKnown RBP eCLIP22.98■■□□□ 1.27
PCDHA1-201ENST00000378133 DISP1Q96F81 1524 aa22.95■■□□□ 1.27
PCDHA1-201ENST00000378133 HNRNPUQ00839 825 aaKnown RBP eCLIP22.95■■□□□ 1.27
PCDHA1-201ENST00000378133 KIAA0556O60303 1618 aa22.94■■□□□ 1.26
PCDHA1-201ENST00000378133 IRX6P78412 446 aaPredicted RBP22.92■■□□□ 1.26
PCDHA1-201ENST00000378133 ZNF644Q9H582 1327 aaPredicted RBP22.92■■□□□ 1.26
PCDHA1-201ENST00000378133 DAPK1P53355 1430 aa22.89■■□□□ 1.26
PCDHA1-201ENST00000378133 C11orf95C9JLR9 678 aaPredicted RBP22.89■■□□□ 1.25
PCDHA1-201ENST00000378133 ABCC5O15440 1437 aa22.87■■□□□ 1.25
PCDHA1-201ENST00000378133 ANKRD30BQ9BXX2 1392 aa22.86■■□□□ 1.25
PCDHA1-201ENST00000378133 NBPF8Q3BBV2 869 aa22.86■■□□□ 1.25
PCDHA1-201ENST00000378133 ROCK1Q13464 1354 aa22.85■■□□□ 1.25
PCDHA1-201ENST00000378133 CCDC184Q52MB2 194 aa22.85■■□□□ 1.25
PCDHA1-201ENST00000378133 JPH4Q96JJ6 628 aa22.85■■□□□ 1.25
PCDHA1-201ENST00000378133 SLC4A1APQ9BWU0 796 aaKnown RBP22.85■■□□□ 1.25
PCDHA1-201ENST00000378133 CNTLNQ9NXG0 1405 aa22.83■■□□□ 1.24
PCDHA1-201ENST00000378133 NUP153P49790 1475 aaKnown RBP22.82■■□□□ 1.24
PCDHA1-201ENST00000378133 RPRD2Q5VT52 1461 aaKnown RBP22.81■■□□□ 1.24
PCDHA1-201ENST00000378133 CCDC7Q96M83 1385 aa22.81■■□□□ 1.24
PCDHA1-201ENST00000378133 DNMT1P26358 1616 aaKnown RBP22.8■■□□□ 1.24
PCDHA1-201ENST00000378133 NCOA1Q15788 1441 aa22.79■■□□□ 1.24
PCDHA1-201ENST00000378133 ERICH6BQ5W0A0 696 aa22.79■■□□□ 1.24
PCDHA1-201ENST00000378133 PRKRIP1Q9H875 184 aaPredicted RBP22.78■■□□□ 1.24
PCDHA1-201ENST00000378133 PPP4R2Q9NY27 417 aa22.77■■□□□ 1.24
PCDHA1-201ENST00000378133 RAPGEF6Q8TEU7 1601 aa22.76■■□□□ 1.23
PCDHA1-201ENST00000378133 TEX14Q8IWB6 1497 aa22.75■■□□□ 1.23
PCDHA1-201ENST00000378133 CARMIL2Q6F5E8 1435 aa22.75■■□□□ 1.23
PCDHA1-201ENST00000378133 PRG4Q92954 1404 aaPredicted RBP22.74■■□□□ 1.23
PCDHA1-201ENST00000378133 FAM9BQ8IZU0 186 aa22.74■■□□□ 1.23
PCDHA1-201ENST00000378133 CFDP1Q9UEE9 299 aaPredicted RBP22.74■■□□□ 1.23
PCDHA1-201ENST00000378133 MYT1LQ9UL68 1186 aa22.73■■□□□ 1.23
PCDHA1-201ENST00000378133 ZNF777Q9ULD5 760 aaPredicted RBP22.72■■□□□ 1.23
PCDHA1-201ENST00000378133 SHROOM2Q13796 1616 aa22.72■■□□□ 1.23
PCDHA1-201ENST00000378133 MRS2Q9HD23 443 aa22.72■■□□□ 1.23
PCDHA1-201ENST00000378133 KIF7Q2M1P5 1343 aa22.71■■□□□ 1.23
PCDHA1-201ENST00000378133 SPATA31E1Q6ZUB1 1445 aa22.7■■□□□ 1.22
PCDHA1-201ENST00000378133 CLASP1Q7Z460 1538 aa22.69■■□□□ 1.22
PCDHA1-201ENST00000378133 TROQ12816 1431 aaPredicted RBP22.69■■□□□ 1.22
PCDHA1-201ENST00000378133 PLB1Q6P1J6 1458 aa22.68■■□□□ 1.22
PCDHA1-201ENST00000378133 PZPP20742 1482 aa22.67■■□□□ 1.22
PCDHA1-201ENST00000378133 CAMSAP2Q08AD1 1489 aa22.67■■□□□ 1.22
PCDHA1-201ENST00000378133 ANO8Q9HCE9 1232 aaPredicted RBP22.67■■□□□ 1.22
PCDHA1-201ENST00000378133 GPATCH8Q9UKJ3 1502 aaKnown RBP22.65■■□□□ 1.22
PCDHA1-201ENST00000378133 ERCC6L2Q5T890 1561 aa22.64■■□□□ 1.22
PCDHA1-201ENST00000378133 ZNF326Q5BKZ1 582 aaKnown RBP22.63■■□□□ 1.21
PCDHA1-201ENST00000378133 B4GALNT3Q6L9W6 998 aa22.63■■□□□ 1.21
PCDHA1-201ENST00000378133 DEKP35659 375 aaKnown RBP22.63■■□□□ 1.21
PCDHA1-201ENST00000378133 PKD2Q13563 968 aa22.62■■□□□ 1.21
PCDHA1-201ENST00000378133 CNGB1Q14028 1251 aaPredicted RBP22.6■■□□□ 1.21
PCDHA1-201ENST00000378133 ABCA8O94911 1581 aa22.6■■□□□ 1.21
PCDHA1-201ENST00000378133 KIF14Q15058 1648 aa22.59■■□□□ 1.21
PCDHA1-201ENST00000378133 POLR3GLQ9BT43 218 aa22.59■■□□□ 1.21
PCDHA1-201ENST00000378133 ZBED9Q6R2W3 1325 aa22.59■■□□□ 1.21
PCDHA1-201ENST00000378133 KIAA1107Q9UPP5 1409 aa22.59■■□□□ 1.21
PCDHA1-201ENST00000378133 ITSN2Q9NZM3 1697 aa22.57■■□□□ 1.2
PCDHA1-201ENST00000378133 ANKRD30AQ9BXX3 1397 aa22.56■■□□□ 1.2
PCDHA1-201ENST00000378133 PTPRGP23470 1445 aa22.56■■□□□ 1.2
PCDHA1-201ENST00000378133 POLR1AO95602 1720 aaPredicted RBP22.56■■□□□ 1.2
PCDHA1-201ENST00000378133 ADGBQ8N7X0 1667 aa22.55■■□□□ 1.2
PCDHA1-201ENST00000378133 ADGRL2O95490 1459 aa22.54■■□□□ 1.2
PCDHA1-201ENST00000378133 USP47Q96K76 1375 aa22.54■■□□□ 1.2
PCDHA1-201ENST00000378133 NOP58Q9Y2X3 529 aaKnown RBP22.53■■□□□ 1.2
PCDHA1-201ENST00000378133 MBD5Q9P267 1494 aa22.53■■□□□ 1.2
PCDHA1-201ENST00000378133 ANKRD50Q9ULJ7 1429 aa22.53■■□□□ 1.2
PCDHA1-201ENST00000378133 PLEKHD1A6NEE1 506 aa22.52■■□□□ 1.2
PCDHA1-201ENST00000378133 ADCY10Q96PN6 1610 aa22.5■■□□□ 1.19
PCDHA1-201ENST00000378133 DHX29Q7Z478 1369 aaKnown RBP22.5■■□□□ 1.19
PCDHA1-201ENST00000378133 CROCC2H7BZ55 1655 aa22.49■■□□□ 1.19
PCDHA1-201ENST00000378133 NUP155O75694 1391 aa22.49■■□□□ 1.19
PCDHA1-201ENST00000378133 BCORL1Q5H9F3 1711 aa22.49■■□□□ 1.19
PCDHA1-201ENST00000378133 NBR1Q14596 966 aa22.48■■□□□ 1.19
PCDHA1-201ENST00000378133 ATP10BO94823 1461 aa22.45■■□□□ 1.19
PCDHA1-201ENST00000378133 PAK3O75914 559 aaPredicted RBP22.45■■□□□ 1.18
PCDHA1-201ENST00000378133 TSPY4P0CV99 314 aa22.44■■□□□ 1.18
PCDHA1-201ENST00000378133 TSPY10P0CW01 314 aa22.44■■□□□ 1.18
PCDHA1-201ENST00000378133 KDM2AQ9Y2K7 1162 aa22.44■■□□□ 1.18
PCDHA1-201ENST00000378133 CARD11Q9BXL7 1154 aa22.43■■□□□ 1.18
PCDHA1-201ENST00000378133 C9orf84Q5VXU9 1444 aa22.43■■□□□ 1.18
PCDHA1-201ENST00000378133 CDC42BPAQ5VT25 1732 aa22.42■■□□□ 1.18
PCDHA1-201ENST00000378133 KDM5CP41229 1560 aa22.42■■□□□ 1.18
PCDHA1-201ENST00000378133 HNRNPMP52272 730 aaKnown RBP eCLIP22.41■■□□□ 1.18
PCDHA1-201ENST00000378133 OSCARQ8IYS5 282 aa22.41■■□□□ 1.18
PCDHA1-201ENST00000378133 ARID4BQ4LE39 1312 aaPredicted RBP22.4■■□□□ 1.18
PCDHA1-201ENST00000378133 ABCC10Q5T3U5 1492 aa22.4■■□□□ 1.18
PCDHA1-201ENST00000378133 SENP3-EIF4A1A0A087X0R7 540 aa22.4■■□□□ 1.18
PCDHA1-201ENST00000378133 UHRF1BP1Q6BDS2 1440 aa22.39■■□□□ 1.17
PCDHA1-201ENST00000378133 ABCC2Q92887 1545 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms