RNA–Protein interactions for RNA: ENST00000377016.8

GABBR1-204, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5 BASIC

Gene GABBR1, Length 4,299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-204ENST00000377016 KTN1Q86UP2 1357 aaKnown RBP23.89■■□□□ 1.41
GABBR1-204ENST00000377016 TCERG1O14776 1098 aaKnown RBP23.88■■□□□ 1.41
GABBR1-204ENST00000377016 TMF1P82094 1093 aa23.87■■□□□ 1.41
GABBR1-204ENST00000377016 HSP90AA1P07900 732 aaKnown RBP23.87■■□□□ 1.41
GABBR1-204ENST00000377016 PDS5BQ9NTI5 1447 aa23.86■■□□□ 1.41
GABBR1-204ENST00000377016 KIF7Q2M1P5 1343 aa23.85■■□□□ 1.41
GABBR1-204ENST00000377016 CNTLNQ9NXG0 1405 aa23.85■■□□□ 1.41
GABBR1-204ENST00000377016 ROCK2O75116 1388 aaKnown RBP23.84■■□□□ 1.41
GABBR1-204ENST00000377016 ANKRD30AQ9BXX3 1397 aa23.84■■□□□ 1.41
GABBR1-204ENST00000377016 BECN1Q14457 450 aa23.84■■□□□ 1.41
GABBR1-204ENST00000377016 ST20-MTHFSA0A0A6YYL1 179 aa23.83■■□□□ 1.41
GABBR1-204ENST00000377016 NEUROD2Q15784 382 aa23.83■■□□□ 1.4
GABBR1-204ENST00000377016 NCOA2Q15596 1464 aa23.83■■□□□ 1.4
GABBR1-204ENST00000377016 FYCO1Q9BQS8 1478 aa23.82■■□□□ 1.4
GABBR1-204ENST00000377016 NLRP13Q86W25 1043 aa23.82■■□□□ 1.4
GABBR1-204ENST00000377016 USP47Q96K76 1375 aa23.81■■□□□ 1.4
GABBR1-204ENST00000377016 CCDC184Q52MB2 194 aa23.79■■□□□ 1.4
GABBR1-204ENST00000377016 HFM1A2PYH4 1435 aa23.77■■□□□ 1.4
GABBR1-204ENST00000377016 BICRAQ9NZM4 1560 aa23.77■■□□□ 1.4
GABBR1-204ENST00000377016 ZNF644Q9H582 1327 aaPredicted RBP23.76■■□□□ 1.39
GABBR1-204ENST00000377016 FRAT1Q92837 279 aaPredicted RBP23.76■■□□□ 1.39
GABBR1-204ENST00000377016 KIF15Q9NS87 1388 aa23.75■■□□□ 1.39
GABBR1-204ENST00000377016 MYBBP1AQ9BQG0 1328 aaKnown RBP23.75■■□□□ 1.39
GABBR1-204ENST00000377016 EXOC6Q8TAG9 804 aa23.75■■□□□ 1.39
GABBR1-204ENST00000377016 PDE3BQ13370 1112 aa23.73■■□□□ 1.39
GABBR1-204ENST00000377016 RRP1P56182 461 aaKnown RBP23.71■■□□□ 1.39
GABBR1-204ENST00000377016 GAPVD1Q14C86 1478 aa23.71■■□□□ 1.39
GABBR1-204ENST00000377016 PEG3Q9GZU2 1588 aa23.7■■□□□ 1.39
GABBR1-204ENST00000377016 TNNT2P45379 298 aaPredicted RBP23.7■■□□□ 1.38
GABBR1-204ENST00000377016 HNRNPMP52272 730 aaKnown RBP eCLIP23.69■■□□□ 1.38
GABBR1-204ENST00000377016 PDE4AP27815 886 aa23.69■■□□□ 1.38
GABBR1-204ENST00000377016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.68■■□□□ 1.382e-7■■■■■ 29.2
GABBR1-204ENST00000377016 NBPF8Q3BBV2 869 aa23.68■■□□□ 1.38
GABBR1-204ENST00000377016 PLIN1O60240 522 aa23.67■■□□□ 1.38
GABBR1-204ENST00000377016 ANP32BQ92688 251 aaKnown RBP23.67■■□□□ 1.38
GABBR1-204ENST00000377016 SENP3Q9H4L4 574 aaPredicted RBP23.67■■□□□ 1.38
GABBR1-204ENST00000377016 HMGXB3Q12766 1538 aa23.65■■□□□ 1.38
GABBR1-204ENST00000377016 NAIPQ13075 1403 aa23.65■■□□□ 1.38
GABBR1-204ENST00000377016 MAPKBP1O60336 1514 aa23.65■■□□□ 1.38
GABBR1-204ENST00000377016 CARMIL2Q6F5E8 1435 aa23.64■■□□□ 1.37
GABBR1-204ENST00000377016 CFAP53Q96M91 514 aa23.64■■□□□ 1.37
GABBR1-204ENST00000377016 MSH5O43196 834 aa23.64■■□□□ 1.37
GABBR1-204ENST00000377016 EFCAB5A4FU69 1503 aa23.63■■□□□ 1.37
GABBR1-204ENST00000377016 MAP3K1Q13233 1512 aa23.63■■□□□ 1.37
GABBR1-204ENST00000377016 FTSJ3Q8IY81 847 aaKnown RBP23.62■■□□□ 1.37
GABBR1-204ENST00000377016 PCF11O94913 1555 aaKnown RBP23.6■■□□□ 1.37
GABBR1-204ENST00000377016 SLC24A1O60721 1099 aa23.59■■□□□ 1.37
GABBR1-204ENST00000377016 PANK3Q9H999 370 aa23.59■■□□□ 1.37
GABBR1-204ENST00000377016 AKNAQ7Z591 1439 aa23.58■■□□□ 1.37
GABBR1-204ENST00000377016 GOLGA2Q08379 1002 aa23.58■■□□□ 1.36
GABBR1-204ENST00000377016 STAG3Q9UJ98 1225 aa23.58■■□□□ 1.36
GABBR1-204ENST00000377016 C11orf95C9JLR9 678 aaPredicted RBP23.56■■□□□ 1.36
GABBR1-204ENST00000377016 ERCC6Q03468 1493 aa23.56■■□□□ 1.36
GABBR1-204ENST00000377016 BIVM-ERCC5R4GMW8 1640 aa23.55■■□□□ 1.36
GABBR1-204ENST00000377016 PAK3O75914 559 aaPredicted RBP23.55■■□□□ 1.36
GABBR1-204ENST00000377016 CRBNQ96SW2 442 aa23.55■■□□□ 1.36
GABBR1-204ENST00000377016 NPM1P06748 294 aaKnown RBP eCLIP23.54■■□□□ 1.36
GABBR1-204ENST00000377016 JPH4Q96JJ6 628 aa23.53■■□□□ 1.36
GABBR1-204ENST00000377016 ARID4BQ4LE39 1312 aaPredicted RBP23.53■■□□□ 1.36
GABBR1-204ENST00000377016 USP35Q9P2H5 1018 aa23.53■■□□□ 1.36
GABBR1-204ENST00000377016 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
GABBR1-204ENST00000377016 SLC4A3P48751 1232 aa23.52■■□□□ 1.36
GABBR1-204ENST00000377016 CCDC146Q8IYE0 955 aa23.52■■□□□ 1.36
GABBR1-204ENST00000377016 UNC13AQ9UPW8 1703 aa23.52■■□□□ 1.36
GABBR1-204ENST00000377016 CCDC144AA2RUR9 1427 aa23.51■■□□□ 1.35
GABBR1-204ENST00000377016 MS4A1P11836 297 aa23.49■■□□□ 1.35
GABBR1-204ENST00000377016 EHBP1L1Q8N3D4 1523 aa23.49■■□□□ 1.35
GABBR1-204ENST00000377016 SLKQ9H2G2 1235 aaPredicted RBP23.48■■□□□ 1.35
GABBR1-204ENST00000377016 PNISRQ8TF01 805 aaKnown RBP23.47■■□□□ 1.35
GABBR1-204ENST00000377016 MORC1Q86VD1 984 aa23.47■■□□□ 1.35
GABBR1-204ENST00000377016 TOPBP1Q92547 1522 aa23.47■■□□□ 1.35
GABBR1-204ENST00000377016 MYH16Q9H6N6 1097 aa23.46■■□□□ 1.35
GABBR1-204ENST00000377016 GLIPR1L2Q4G1C9 344 aa23.46■■□□□ 1.35
GABBR1-204ENST00000377016 SPRYD3Q8NCJ5 442 aa23.45■■□□□ 1.34
GABBR1-204ENST00000377016 NESP48681 1621 aa23.45■■□□□ 1.34
GABBR1-204ENST00000377016 RSPH4AQ5TD94 716 aa23.45■■□□□ 1.34
GABBR1-204ENST00000377016 CENPQQ7L2Z9 268 aaPredicted RBP23.45■■□□□ 1.34
GABBR1-204ENST00000377016 TRIM44Q96DX7 344 aaPredicted RBP23.45■■□□□ 1.34
GABBR1-204ENST00000377016 MAPK8IP3Q9UPT6 1336 aa23.44■■□□□ 1.34
GABBR1-204ENST00000377016 U2SURPO15042 1029 aaKnown RBP23.44■■□□□ 1.34
GABBR1-204ENST00000377016 ANKRD50Q9ULJ7 1429 aa23.44■■□□□ 1.34
GABBR1-204ENST00000377016 MIA2Q96PC5 1412 aa23.44■■□□□ 1.34
GABBR1-204ENST00000377016 CDCA7LQ96GN5 454 aa23.43■■□□□ 1.34
GABBR1-204ENST00000377016 BRD4O60885 1362 aaPredicted RBP23.43■■□□□ 1.34
GABBR1-204ENST00000377016 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.349e-7■■■■■ 29.9
GABBR1-204ENST00000377016 SMG6Q86US8 1419 aaKnown RBP23.42■■□□□ 1.34
GABBR1-204ENST00000377016 FAM161AQ3B820 660 aa23.41■■□□□ 1.34
GABBR1-204ENST00000377016 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.4■■□□□ 1.34
GABBR1-204ENST00000377016 SUPT6HQ7KZ85 1726 aaKnown RBP23.38■■□□□ 1.33
GABBR1-204ENST00000377016 KANK1Q14678 1352 aa23.37■■□□□ 1.33
GABBR1-204ENST00000377016 GOLGA6L22H0YM25 854 aa23.36■■□□□ 1.33
GABBR1-204ENST00000377016 GSE1Q14687 1217 aa23.36■■□□□ 1.33
GABBR1-204ENST00000377016 EFCAB2Q5VUJ9 269 aa23.36■■□□□ 1.33
GABBR1-204ENST00000377016 ABCA10Q8WWZ4 1543 aa23.36■■□□□ 1.33
GABBR1-204ENST00000377016 PTPRKQ15262 1439 aa23.36■■□□□ 1.33
GABBR1-204ENST00000377016 CLUAP1Q96AJ1 413 aa23.36■■□□□ 1.33
GABBR1-204ENST00000377016 CENPJQ9HC77 1338 aaPredicted RBP23.34■■□□□ 1.33
GABBR1-204ENST00000377016 ANKRD30BQ9BXX2 1392 aa23.34■■□□□ 1.33
GABBR1-204ENST00000377016 KIAA1107Q9UPP5 1409 aa23.33■■□□□ 1.33
GABBR1-204ENST00000377016 APAF1O14727 1248 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms