RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 CCNB3Q8WWL7 1395 aa42.65■■■■■ 4.42
COMMD3-201ENST00000376836 ADGRL1O94910 1474 aa42.65■■■■■ 4.42
COMMD3-201ENST00000376836 MAP3K1Q13233 1512 aa42.63■■■■■ 4.42
COMMD3-201ENST00000376836 PREX2Q70Z35 1606 aa42.61■■■■■ 4.41
COMMD3-201ENST00000376836 SCAPERQ9BY12 1400 aa42.6■■■■■ 4.41
COMMD3-201ENST00000376836 LRRC9Q6ZRR7 1453 aa42.56■■■■■ 4.4
COMMD3-201ENST00000376836 CDC42BPBQ9Y5S2 1711 aa42.56■■■■■ 4.4
COMMD3-201ENST00000376836 GPATCH8Q9UKJ3 1502 aaKnown RBP42.56■■■■■ 4.4
COMMD3-201ENST00000376836 CFDP1Q9UEE9 299 aaPredicted RBP42.55■■■■■ 4.4
COMMD3-201ENST00000376836 CDC42BPAQ5VT25 1732 aa42.54■■■■■ 4.4
COMMD3-201ENST00000376836 ZNF777Q9ULD5 760 aaPredicted RBP42.53■■■■■ 4.4
COMMD3-201ENST00000376836 SUPT6HQ7KZ85 1726 aaKnown RBP42.51■■■■■ 4.4
COMMD3-201ENST00000376836 FRMPD1Q5SYB0 1578 aa42.48■■■■■ 4.39
COMMD3-201ENST00000376836 KANK4Q5T7N3 995 aaPredicted RBP42.47■■■■■ 4.39
COMMD3-201ENST00000376836 NCOA2Q15596 1464 aa42.47■■■■■ 4.39
COMMD3-201ENST00000376836 POGZQ7Z3K3 1410 aa42.46■■■■■ 4.39
COMMD3-201ENST00000376836 RICTORQ6R327 1708 aa42.45■■■■■ 4.39
COMMD3-201ENST00000376836 ITSN2Q9NZM3 1697 aa42.4■■■■■ 4.38
COMMD3-201ENST00000376836 ZNF518AQ6AHZ1 1483 aa42.39■■■■■ 4.38
COMMD3-201ENST00000376836 ABCC1P33527 1531 aa42.37■■■■■ 4.37
COMMD3-201ENST00000376836 MYT1LQ9UL68 1186 aa42.36■■■■■ 4.37
COMMD3-201ENST00000376836 MAGI2Q86UL8 1455 aa42.35■■■■■ 4.37
COMMD3-201ENST00000376836 PLEKHH2Q8IVE3 1493 aa42.35■■■■■ 4.37
COMMD3-201ENST00000376836 ZMYM4Q5VZL5 1548 aa42.35■■■■■ 4.37
COMMD3-201ENST00000376836 AFAP1Q8N556 730 aa42.35■■■■■ 4.37
COMMD3-201ENST00000376836 SAMD9LQ8IVG5 1584 aa42.31■■■■■ 4.36
COMMD3-201ENST00000376836 KIAA1107Q9UPP5 1409 aa42.28■■■■■ 4.36
COMMD3-201ENST00000376836 HNRNPMP52272 730 aaKnown RBP eCLIP42.28■■■■■ 4.36
COMMD3-201ENST00000376836 ZFYVE16Q7Z3T8 1539 aa42.28■■■■■ 4.36
COMMD3-201ENST00000376836 ARHGEF12Q9NZN5 1544 aa42.28■■■■■ 4.36
COMMD3-201ENST00000376836 TRAPPC8Q9Y2L5 1435 aa42.26■■■■■ 4.36
COMMD3-201ENST00000376836 ARHGEF40Q8TER5 1519 aa42.24■■■■■ 4.35
COMMD3-201ENST00000376836 KDM4FA0A1W2PPD8 638 aa42.23■■■■■ 4.35
COMMD3-201ENST00000376836 SYCP2Q9BX26 1530 aa42.23■■■■■ 4.35
COMMD3-201ENST00000376836 KDM5CP41229 1560 aa42.22■■■■■ 4.35
COMMD3-201ENST00000376836 ARID4BQ4LE39 1312 aaPredicted RBP42.21■■■■■ 4.35
COMMD3-201ENST00000376836 ZNF644Q9H582 1327 aaPredicted RBP42.21■■■■■ 4.35
COMMD3-201ENST00000376836 YEATS2Q9ULM3 1422 aa42.2■■■■■ 4.35
COMMD3-201ENST00000376836 MYOM3Q5VTT5 1437 aa42.15■■■■■ 4.34
COMMD3-201ENST00000376836 MLH3Q9UHC1 1453 aa42.15■■■■■ 4.34
COMMD3-201ENST00000376836 HECW2Q9P2P5 1572 aa42.14■■■■■ 4.34
COMMD3-201ENST00000376836 SPAG9O60271 1321 aaKnown RBP42.13■■■■■ 4.33
COMMD3-201ENST00000376836 ATP10AO60312 1499 aa42.11■■■■■ 4.33
COMMD3-201ENST00000376836 CAMSAP2Q08AD1 1489 aa42.11■■■■■ 4.33
COMMD3-201ENST00000376836 MIA2Q96PC5 1412 aa42.11■■■■■ 4.33
COMMD3-201ENST00000376836 RSPH4AQ5TD94 716 aa42.1■■■■■ 4.33
COMMD3-201ENST00000376836 C9orf84Q5VXU9 1444 aa42.06■■■■■ 4.32
COMMD3-201ENST00000376836 MBD5Q9P267 1494 aa42.04■■■■■ 4.32
COMMD3-201ENST00000376836 CCDC141Q6ZP82 1450 aa41.97■■■■■ 4.31
COMMD3-201ENST00000376836 DIP2CQ9Y2E4 1556 aa41.96■■■■■ 4.31
COMMD3-201ENST00000376836 TSPY4P0CV99 314 aa41.95■■■■■ 4.31
COMMD3-201ENST00000376836 TSPY10P0CW01 314 aa41.95■■■■■ 4.31
COMMD3-201ENST00000376836 KIDINS220Q9ULH0 1771 aa41.94■■■■■ 4.3
COMMD3-201ENST00000376836 ATP7AQ04656 1500 aa41.94■■■■■ 4.3
COMMD3-201ENST00000376836 ABCA6Q8N139 1617 aa41.93■■■■■ 4.3
COMMD3-201ENST00000376836 FGD6Q6ZV73 1430 aa41.9■■■■■ 4.3
COMMD3-201ENST00000376836 ARHGEF5Q12774 1597 aa41.9■■■■■ 4.3
COMMD3-201ENST00000376836 RTEL1-TNFRSF6BF6WH68 1400 aa41.9■■■■■ 4.3
COMMD3-201ENST00000376836 MLECQ14165 292 aa41.89■■■■■ 4.3
COMMD3-201ENST00000376836 BCORL1Q5H9F3 1711 aa41.88■■■■■ 4.29
COMMD3-201ENST00000376836 INO80Q9ULG1 1556 aaPredicted RBP41.88■■■■■ 4.29
COMMD3-201ENST00000376836 REREQ9P2R6 1566 aa41.87■■■■■ 4.29
COMMD3-201ENST00000376836 PPARGC1BQ86YN6 1023 aaKnown RBP41.86■■■■■ 4.29
COMMD3-201ENST00000376836 PTPN23Q9H3S7 1636 aa41.86■■■■■ 4.29
COMMD3-201ENST00000376836 SIGLEC1Q9BZZ2 1709 aa41.81■■■■■ 4.28
COMMD3-201ENST00000376836 ADAMTSL3P82987 1691 aa41.8■■■■■ 4.28
COMMD3-201ENST00000376836 TCOF1Q13428 1488 aaKnown RBP41.77■■■■■ 4.28
COMMD3-201ENST00000376836 A2MP01023 1474 aa41.76■■■■■ 4.28
COMMD3-201ENST00000376836 AGLP35573 1532 aa41.75■■■■■ 4.27
COMMD3-201ENST00000376836 FAM50AQ14320 339 aaKnown RBP41.75■■■■■ 4.27
COMMD3-201ENST00000376836 ADGBQ8N7X0 1667 aa41.71■■■■■ 4.27
COMMD3-201ENST00000376836 MADDQ8WXG6 1647 aa41.7■■■■■ 4.27
COMMD3-201ENST00000376836 ESF1Q9H501 851 aaKnown RBP41.68■■■■■ 4.26
COMMD3-201ENST00000376836 DHX29Q7Z478 1369 aaKnown RBP41.66■■■■■ 4.26
COMMD3-201ENST00000376836 MAST1Q9Y2H9 1570 aa41.66■■■■■ 4.26
COMMD3-201ENST00000376836 ABCC5O15440 1437 aa41.65■■■■■ 4.26
COMMD3-201ENST00000376836 PTPRMP28827 1452 aa41.65■■■■■ 4.26
COMMD3-201ENST00000376836 DAPK1P53355 1430 aa41.64■■■■■ 4.26
COMMD3-201ENST00000376836 PLXNC1O60486 1568 aa41.62■■■■■ 4.25
COMMD3-201ENST00000376836 DNMT1P26358 1616 aaKnown RBP41.6■■■■■ 4.25
COMMD3-201ENST00000376836 SHANK2Q9UPX8 1470 aa41.6■■■■■ 4.25
COMMD3-201ENST00000376836 RIMS1Q86UR5 1692 aaKnown RBP41.6■■■■■ 4.25
COMMD3-201ENST00000376836 FER1L4A9Z1Z3 1794 aa41.58■■■■■ 4.25
COMMD3-201ENST00000376836 GGT6Q6P531 493 aa41.55■■■■■ 4.24
COMMD3-201ENST00000376836 PLPPR3Q6T4P5 718 aa41.53■■■■■ 4.24
COMMD3-201ENST00000376836 CROCC2H7BZ55 1655 aa41.53■■■■■ 4.24
COMMD3-201ENST00000376836 KIF3BO15066 747 aa41.52■■■■■ 4.24
COMMD3-201ENST00000376836 CHIC2Q9UKJ5 165 aa41.52■■■■■ 4.24
COMMD3-201ENST00000376836 RRP7BPQ9NSQ0 103 aa41.48■■■■■ 4.23
COMMD3-201ENST00000376836 PPP6R1Q9UPN7 881 aa41.48■■■■■ 4.23
COMMD3-201ENST00000376836 ANKRD30AQ9BXX3 1397 aa41.48■■■■■ 4.23
COMMD3-201ENST00000376836 CNTLNQ9NXG0 1405 aa41.46■■■■■ 4.23
COMMD3-201ENST00000376836 KIF15Q9NS87 1388 aa41.46■■■■■ 4.23
COMMD3-201ENST00000376836 DUOX2Q9NRD8 1548 aa41.43■■■■■ 4.22
COMMD3-201ENST00000376836 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP41.43■■■■■ 4.22
COMMD3-201ENST00000376836 ITGAEP38570 1179 aa41.36■■■■■ 4.21
COMMD3-201ENST00000376836 CEBPAP49715 358 aaPredicted RBP41.36■■■■■ 4.21
COMMD3-201ENST00000376836 NCOA1Q15788 1441 aa41.35■■■■■ 4.21
COMMD3-201ENST00000376836 RRBP1Q9P2E9 1410 aaKnown RBP41.34■■■■■ 4.21
COMMD3-201ENST00000376836 ADGRL2O95490 1459 aa41.32■■■■■ 4.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms