RNA–Protein interactions for RNA: ENST00000376809.9

HLA-A-203, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,611 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-203ENST00000376809 ARHGAP5Q13017 1502 aa27.35■■□□□ 1.97
HLA-A-203ENST00000376809 CFDP1Q9UEE9 299 aaPredicted RBP27.35■■□□□ 1.97
HLA-A-203ENST00000376809 MIA2Q96PC5 1412 aa27.32■■□□□ 1.96
HLA-A-203ENST00000376809 PTPN23Q9H3S7 1636 aa27.32■■□□□ 1.96
HLA-A-203ENST00000376809 ARAP3Q8WWN8 1544 aa27.31■■□□□ 1.96
HLA-A-203ENST00000376809 ZNF777Q9ULD5 760 aaPredicted RBP27.3■■□□□ 1.96
HLA-A-203ENST00000376809 RRBP1Q9P2E9 1410 aaKnown RBP27.3■■□□□ 1.96
HLA-A-203ENST00000376809 PPRC1Q5VV67 1664 aaKnown RBP27.27■■□□□ 1.96
HLA-A-203ENST00000376809 FANCAO15360 1455 aa27.26■■□□□ 1.96
HLA-A-203ENST00000376809 ZNF644Q9H582 1327 aaPredicted RBP27.26■■□□□ 1.95
HLA-A-203ENST00000376809 SAMD9LQ8IVG5 1584 aa27.26■■□□□ 1.95
HLA-A-203ENST00000376809 CAMSAP2Q08AD1 1489 aa27.26■■□□□ 1.95
HLA-A-203ENST00000376809 EFCAB2Q5VUJ9 269 aa27.26■■□□□ 1.95
HLA-A-203ENST00000376809 FAM50AQ14320 339 aaKnown RBP27.25■■□□□ 1.95
HLA-A-203ENST00000376809 TCOF1Q13428 1488 aaKnown RBP27.24■■□□□ 1.95
HLA-A-203ENST00000376809 CFAP74Q9C0B2 1584 aa27.23■■□□□ 1.95
HLA-A-203ENST00000376809 TEX14Q8IWB6 1497 aa27.2■■□□□ 1.94
HLA-A-203ENST00000376809 TRIM26Q12899 539 aaPredicted RBP27.19■■□□□ 1.94
HLA-A-203ENST00000376809 ABCC1P33527 1531 aa27.16■■□□□ 1.94
HLA-A-203ENST00000376809 NEO1Q92859 1461 aa27.16■■□□□ 1.94
HLA-A-203ENST00000376809 AKNAQ7Z591 1439 aa27.16■■□□□ 1.94
HLA-A-203ENST00000376809 SYCP2Q9BX26 1530 aa27.16■■□□□ 1.94
HLA-A-203ENST00000376809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.15■■□□□ 1.94
HLA-A-203ENST00000376809 ADGRL1O94910 1474 aa27.14■■□□□ 1.94
HLA-A-203ENST00000376809 PLEKHH2Q8IVE3 1493 aa27.14■■□□□ 1.94
HLA-A-203ENST00000376809 HNRNPMP52272 730 aaKnown RBP eCLIP27.12■■□□□ 1.93
HLA-A-203ENST00000376809 ARHGEF12Q9NZN5 1544 aa27.12■■□□□ 1.93
HLA-A-203ENST00000376809 ITGAEP38570 1179 aa27.11■■□□□ 1.93
HLA-A-203ENST00000376809 KIAA1107Q9UPP5 1409 aa27.11■■□□□ 1.93
HLA-A-203ENST00000376809 DNMT1P26358 1616 aaKnown RBP27.1■■□□□ 1.93
HLA-A-203ENST00000376809 SCAPERQ9BY12 1400 aa27.09■■□□□ 1.93
HLA-A-203ENST00000376809 MBD5Q9P267 1494 aa27.09■■□□□ 1.93
HLA-A-203ENST00000376809 ARHGEF5Q12774 1597 aa27.08■■□□□ 1.93
HLA-A-203ENST00000376809 DAPK1P53355 1430 aa27.06■■□□□ 1.92
HLA-A-203ENST00000376809 CROCC2H7BZ55 1655 aa27.06■■□□□ 1.92
HLA-A-203ENST00000376809 ABCC5O15440 1437 aa27.04■■□□□ 1.92
HLA-A-203ENST00000376809 TRAPPC8Q9Y2L5 1435 aa27.04■■□□□ 1.92
HLA-A-203ENST00000376809 CCDC141Q6ZP82 1450 aa27.04■■□□□ 1.92
HLA-A-203ENST00000376809 PTPRKQ15262 1439 aa27.01■■□□□ 1.91
HLA-A-203ENST00000376809 PCGF6Q9BYE7 350 aa27.01■■□□□ 1.91
HLA-A-203ENST00000376809 DENND4BO75064 1496 aaPredicted RBP27■■□□□ 1.91
HLA-A-203ENST00000376809 RSPH4AQ5TD94 716 aa26.99■■□□□ 1.91
HLA-A-203ENST00000376809 RICTORQ6R327 1708 aa26.99■■□□□ 1.91
HLA-A-203ENST00000376809 POGZQ7Z3K3 1410 aa26.99■■□□□ 1.91
HLA-A-203ENST00000376809 AFAP1Q8N556 730 aa26.98■■□□□ 1.91
HLA-A-203ENST00000376809 CHIC2Q9UKJ5 165 aa26.97■■□□□ 1.91
HLA-A-203ENST00000376809 ZNF518AQ6AHZ1 1483 aa26.97■■□□□ 1.91
HLA-A-203ENST00000376809 RAPGEF3O95398 923 aa26.96■■□□□ 1.91
HLA-A-203ENST00000376809 TSPY4P0CV99 314 aa26.95■■□□□ 1.91
HLA-A-203ENST00000376809 TSPY10P0CW01 314 aa26.95■■□□□ 1.91
HLA-A-203ENST00000376809 SHANK2Q9UPX8 1470 aa26.95■■□□□ 1.9
HLA-A-203ENST00000376809 FRMPD1Q5SYB0 1578 aa26.94■■□□□ 1.9
HLA-A-203ENST00000376809 C9orf84Q5VXU9 1444 aa26.94■■□□□ 1.9
HLA-A-203ENST00000376809 ADGBQ8N7X0 1667 aa26.94■■□□□ 1.9
HLA-A-203ENST00000376809 COL17A1Q9UMD9 1497 aaPredicted RBP26.94■■□□□ 1.9
HLA-A-203ENST00000376809 KDM5CP41229 1560 aa26.92■■□□□ 1.9
HLA-A-203ENST00000376809 KDM6BO15054 1643 aa26.92■■□□□ 1.9
HLA-A-203ENST00000376809 MAST1Q9Y2H9 1570 aa26.91■■□□□ 1.9
HLA-A-203ENST00000376809 SPAG9O60271 1321 aaKnown RBP26.9■■□□□ 1.9
HLA-A-203ENST00000376809 ZFYVE16Q7Z3T8 1539 aa26.88■■□□□ 1.89
HLA-A-203ENST00000376809 INO80Q9ULG1 1556 aaPredicted RBP26.88■■□□□ 1.89
HLA-A-203ENST00000376809 HECW2Q9P2P5 1572 aa26.87■■□□□ 1.89
HLA-A-203ENST00000376809 MYT1LQ9UL68 1186 aa26.87■■□□□ 1.89
HLA-A-203ENST00000376809 ATP7AQ04656 1500 aa26.87■■□□□ 1.89
HLA-A-203ENST00000376809 KIDINS220Q9ULH0 1771 aa26.86■■□□□ 1.89
HLA-A-203ENST00000376809 ADGRL2O95490 1459 aa26.86■■□□□ 1.89
HLA-A-203ENST00000376809 RRP7BPQ9NSQ0 103 aa26.84■■□□□ 1.89
HLA-A-203ENST00000376809 ZMYM4Q5VZL5 1548 aa26.84■■□□□ 1.89
HLA-A-203ENST00000376809 ANKRD30AQ9BXX3 1397 aa26.83■■□□□ 1.89
HLA-A-203ENST00000376809 RTEL1-TNFRSF6BF6WH68 1400 aa26.83■■□□□ 1.89
HLA-A-203ENST00000376809 ROCK1Q13464 1354 aa26.82■■□□□ 1.88
HLA-A-203ENST00000376809 NCOA1Q15788 1441 aa26.82■■□□□ 1.88
HLA-A-203ENST00000376809 MLH3Q9UHC1 1453 aa26.82■■□□□ 1.88
HLA-A-203ENST00000376809 PLXNC1O60486 1568 aa26.82■■□□□ 1.88
HLA-A-203ENST00000376809 GCC2Q8IWJ2 1684 aa26.79■■□□□ 1.88
HLA-A-203ENST00000376809 KIF15Q9NS87 1388 aa26.77■■□□□ 1.88
HLA-A-203ENST00000376809 ABCA6Q8N139 1617 aa26.77■■□□□ 1.88
HLA-A-203ENST00000376809 HFM1A2PYH4 1435 aa26.77■■□□□ 1.88
HLA-A-203ENST00000376809 NAIPQ13075 1403 aa26.76■■□□□ 1.87
HLA-A-203ENST00000376809 YEATS2Q9ULM3 1422 aa26.75■■□□□ 1.87
HLA-A-203ENST00000376809 MAGI2Q86UL8 1455 aa26.74■■□□□ 1.87
HLA-A-203ENST00000376809 DIP2CQ9Y2E4 1556 aa26.73■■□□□ 1.87
HLA-A-203ENST00000376809 SETD5Q9C0A6 1442 aa26.71■■□□□ 1.87
HLA-A-203ENST00000376809 DUOX2Q9NRD8 1548 aa26.71■■□□□ 1.87
HLA-A-203ENST00000376809 ARHGEF40Q8TER5 1519 aa26.69■■□□□ 1.86
HLA-A-203ENST00000376809 ANKRD50Q9ULJ7 1429 aa26.67■■□□□ 1.86
HLA-A-203ENST00000376809 A2MP01023 1474 aa26.66■■□□□ 1.86
HLA-A-203ENST00000376809 RAB3GAP2Q9H2M9 1393 aa26.66■■□□□ 1.86
HLA-A-203ENST00000376809 DHX29Q7Z478 1369 aaKnown RBP26.63■■□□□ 1.85
HLA-A-203ENST00000376809 ATP10AO60312 1499 aa26.63■■□□□ 1.85
HLA-A-203ENST00000376809 ERBINQ96RT1 1412 aa26.62■■□□□ 1.85
HLA-A-203ENST00000376809 EIF2AK4Q9P2K8 1649 aaKnown RBP26.58■■□□□ 1.85
HLA-A-203ENST00000376809 REREQ9P2R6 1566 aa26.57■■□□□ 1.84
HLA-A-203ENST00000376809 SIGLEC1Q9BZZ2 1709 aa26.57■■□□□ 1.84
HLA-A-203ENST00000376809 KIF3BO15066 747 aa26.54■■□□□ 1.84
HLA-A-203ENST00000376809 BCORL1Q5H9F3 1711 aa26.52■■□□□ 1.84
HLA-A-203ENST00000376809 HRCP23327 699 aa26.5■■□□□ 1.83
HLA-A-203ENST00000376809 UNC13BO14795 1591 aa26.5■■□□□ 1.83
HLA-A-203ENST00000376809 TRIM52Q96A61 297 aa26.5■■□□□ 1.83
HLA-A-203ENST00000376809 DEPDC5O75140 1603 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms