RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 SAFB2Q14151 953 aaKnown RBP eCLIP13.59□□□□□ -0.23
ZNF550-203ENST00000376230 CCER2I3L3R5 266 aa13.57□□□□□ -0.24
ZNF550-203ENST00000376230 NEUROD2Q15784 382 aa13.57□□□□□ -0.24
ZNF550-203ENST00000376230 TIMELESSQ9UNS1 1208 aa13.57□□□□□ -0.24
ZNF550-203ENST00000376230 ABCA10Q8WWZ4 1543 aa13.55□□□□□ -0.24
ZNF550-203ENST00000376230 PRDM2Q13029 1718 aa13.55□□□□□ -0.24
ZNF550-203ENST00000376230 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
ZNF550-203ENST00000376230 GGT6Q6P531 493 aa13.54□□□□□ -0.24
ZNF550-203ENST00000376230 PRKRIP1Q9H875 184 aaPredicted RBP13.54□□□□□ -0.24
ZNF550-203ENST00000376230 NAIPQ13075 1403 aa13.54□□□□□ -0.24
ZNF550-203ENST00000376230 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
ZNF550-203ENST00000376230 UACAQ9BZF9 1416 aa13.53□□□□□ -0.24
ZNF550-203ENST00000376230 PLEKHG5O94827 1062 aa13.53□□□□□ -0.24
ZNF550-203ENST00000376230 FYCO1Q9BQS8 1478 aa13.52□□□□□ -0.25
ZNF550-203ENST00000376230 KIF7Q2M1P5 1343 aa13.52□□□□□ -0.25
ZNF550-203ENST00000376230 MAPKBP1O60336 1514 aa13.51□□□□□ -0.25
ZNF550-203ENST00000376230 NBPF1Q3BBV0 1214 aa13.51□□□□□ -0.25
ZNF550-203ENST00000376230 PLB1Q6P1J6 1458 aa13.5□□□□□ -0.25
ZNF550-203ENST00000376230 SNAPC4Q5SXM2 1469 aa13.5□□□□□ -0.25
ZNF550-203ENST00000376230 CARMIL2Q6F5E8 1435 aa13.5□□□□□ -0.25
ZNF550-203ENST00000376230 RTL5Q5HYW3 569 aaPredicted RBP13.5□□□□□ -0.25
ZNF550-203ENST00000376230 AFAP1Q8N556 730 aa13.49□□□□□ -0.25
ZNF550-203ENST00000376230 DEKP35659 375 aaKnown RBP13.49□□□□□ -0.25
ZNF550-203ENST00000376230 KIF3BO15066 747 aa13.48□□□□□ -0.25
ZNF550-203ENST00000376230 PPP4R2Q9NY27 417 aa13.48□□□□□ -0.25
ZNF550-203ENST00000376230 PTPRGP23470 1445 aa13.48□□□□□ -0.25
ZNF550-203ENST00000376230 ANKRD30AQ9BXX3 1397 aa13.48□□□□□ -0.25
ZNF550-203ENST00000376230 MLECQ14165 292 aa13.48□□□□□ -0.25
ZNF550-203ENST00000376230 GRIN2BQ13224 1484 aa13.47□□□□□ -0.25
ZNF550-203ENST00000376230 ROCK2O75116 1388 aaKnown RBP13.47□□□□□ -0.25
ZNF550-203ENST00000376230 CANXP27824 592 aaKnown RBP13.46□□□□□ -0.26
ZNF550-203ENST00000376230 STAG3Q9UJ98 1225 aa13.46□□□□□ -0.26
ZNF550-203ENST00000376230 HFM1A2PYH4 1435 aa13.45□□□□□ -0.26
ZNF550-203ENST00000376230 PLIN1O60240 522 aa13.45□□□□□ -0.26
ZNF550-203ENST00000376230 RTN4Q9NQC3 1192 aaKnown RBP13.45□□□□□ -0.26
ZNF550-203ENST00000376230 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
ZNF550-203ENST00000376230 EPRSP07814 1512 aaKnown RBP13.44□□□□□ -0.26
ZNF550-203ENST00000376230 USP47Q96K76 1375 aa13.44□□□□□ -0.26
ZNF550-203ENST00000376230 STK26Q9P289 416 aa13.43□□□□□ -0.26
ZNF550-203ENST00000376230 ANP32AP39687 249 aaKnown RBP13.43□□□□□ -0.26
ZNF550-203ENST00000376230 CCDC146Q8IYE0 955 aa13.42□□□□□ -0.26
ZNF550-203ENST00000376230 KNSTRNQ9Y448 316 aa13.42□□□□□ -0.26
ZNF550-203ENST00000376230 CCDC7Q96M83 1385 aa13.42□□□□□ -0.26
ZNF550-203ENST00000376230 PPM1GO15355 546 aaPredicted RBP13.41□□□□□ -0.26
ZNF550-203ENST00000376230 MRC2Q9UBG0 1479 aa13.41□□□□□ -0.26
ZNF550-203ENST00000376230 PANK3Q9H999 370 aa13.4□□□□□ -0.26
ZNF550-203ENST00000376230 NOP58Q9Y2X3 529 aaKnown RBP13.4□□□□□ -0.26
ZNF550-203ENST00000376230 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
ZNF550-203ENST00000376230 DAXXQ9UER7 740 aaPredicted RBP13.4□□□□□ -0.26
ZNF550-203ENST00000376230 ANKRD50Q9ULJ7 1429 aa13.39□□□□□ -0.27
ZNF550-203ENST00000376230 EFCAB2Q5VUJ9 269 aa13.39□□□□□ -0.27
ZNF550-203ENST00000376230 SLC24A1O60721 1099 aa13.38□□□□□ -0.27
ZNF550-203ENST00000376230 THOC2Q8NI27 1593 aaKnown RBP13.38□□□□□ -0.27
ZNF550-203ENST00000376230 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
ZNF550-203ENST00000376230 PAK3O75914 559 aaPredicted RBP13.38□□□□□ -0.27
ZNF550-203ENST00000376230 LAS1LQ9Y4W2 734 aaKnown RBP13.37□□□□□ -0.27
ZNF550-203ENST00000376230 TRAK1Q9UPV9 953 aa13.37□□□□□ -0.27
ZNF550-203ENST00000376230 CDCA7LQ96GN5 454 aa13.36□□□□□ -0.27
ZNF550-203ENST00000376230 SPAG9O60271 1321 aaKnown RBP13.36□□□□□ -0.27
ZNF550-203ENST00000376230 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
ZNF550-203ENST00000376230 EFCAB5A4FU69 1503 aa13.36□□□□□ -0.27
ZNF550-203ENST00000376230 SKAP1Q86WV1 359 aa13.36□□□□□ -0.27
ZNF550-203ENST00000376230 ABCC5O15440 1437 aa13.36□□□□□ -0.27
ZNF550-203ENST00000376230 DAPK1P53355 1430 aa13.36□□□□□ -0.27
ZNF550-203ENST00000376230 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
ZNF550-203ENST00000376230 RGS3P49796 1198 aa13.35□□□□□ -0.27
ZNF550-203ENST00000376230 TMF1P82094 1093 aa13.35□□□□□ -0.27
ZNF550-203ENST00000376230 SOX12O15370 315 aa13.33□□□□□ -0.28
ZNF550-203ENST00000376230 RRP7AQ9Y3A4 280 aaKnown RBP13.33□□□□□ -0.28
ZNF550-203ENST00000376230 FRAT1Q92837 279 aaPredicted RBP13.33□□□□□ -0.28
ZNF550-203ENST00000376230 LAMC3Q9Y6N6 1575 aa13.33□□□□□ -0.28
ZNF550-203ENST00000376230 IQGAP2Q13576 1575 aa13.32□□□□□ -0.28
ZNF550-203ENST00000376230 TMEM132EQ6IEE7 984 aa13.32□□□□□ -0.28
ZNF550-203ENST00000376230 CYB5RLQ6IPT4 315 aa13.31□□□□□ -0.28
ZNF550-203ENST00000376230 PTPN23Q9H3S7 1636 aa13.31□□□□□ -0.28
ZNF550-203ENST00000376230 ANKRD30BQ9BXX2 1392 aa13.31□□□□□ -0.28
ZNF550-203ENST00000376230 EXOC6Q8TAG9 804 aa13.31□□□□□ -0.28
ZNF550-203ENST00000376230 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
ZNF550-203ENST00000376230 MAGI3Q5TCQ9 1506 aa13.3□□□□□ -0.28
ZNF550-203ENST00000376230 EHBP1L1Q8N3D4 1523 aa13.3□□□□□ -0.28
ZNF550-203ENST00000376230 TROQ12816 1431 aaPredicted RBP13.3□□□□□ -0.28
ZNF550-203ENST00000376230 AKNAQ7Z591 1439 aa13.29□□□□□ -0.28
ZNF550-203ENST00000376230 NUTM2FA1L443 756 aa13.29□□□□□ -0.28
ZNF550-203ENST00000376230 IFT140Q96RY7 1462 aa13.29□□□□□ -0.28
ZNF550-203ENST00000376230 KIAA0586Q9BVV6 1533 aa13.29□□□□□ -0.28
ZNF550-203ENST00000376230 ARXQ96QS3 562 aa13.28□□□□□ -0.28
ZNF550-203ENST00000376230 CNTLNQ9NXG0 1405 aa13.28□□□□□ -0.28
ZNF550-203ENST00000376230 CFAP70Q5T0N1 1121 aa13.28□□□□□ -0.28
ZNF550-203ENST00000376230 RCAN3Q9UKA8 241 aa13.28□□□□□ -0.28
ZNF550-203ENST00000376230 GRIN2AQ12879 1464 aa13.28□□□□□ -0.28
ZNF550-203ENST00000376230 U2SURPO15042 1029 aaKnown RBP13.27□□□□□ -0.28
ZNF550-203ENST00000376230 NUDCQ9Y266 331 aa13.27□□□□□ -0.28
ZNF550-203ENST00000376230 BCL2L13Q9BXK5 485 aa13.27□□□□□ -0.29
ZNF550-203ENST00000376230 SUPT6HQ7KZ85 1726 aaKnown RBP13.27□□□□□ -0.29
ZNF550-203ENST00000376230 C9orf84Q5VXU9 1444 aa13.27□□□□□ -0.29
ZNF550-203ENST00000376230 KIF21AQ7Z4S6 1674 aa13.27□□□□□ -0.29
ZNF550-203ENST00000376230 KTN1Q86UP2 1357 aaKnown RBP13.26□□□□□ -0.29
ZNF550-203ENST00000376230 ESF1Q9H501 851 aaKnown RBP13.26□□□□□ -0.29
ZNF550-203ENST00000376230 NUP153P49790 1475 aaKnown RBP13.25□□□□□ -0.29
ZNF550-203ENST00000376230 NCOA1Q15788 1441 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms