RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 CDC42BPAQ5VT25 1732 aa27.37■■□□□ 1.97
C6orf48-204ENST00000375639 EFCAB2Q5VUJ9 269 aa27.36■■□□□ 1.97
C6orf48-204ENST00000375639 CFDP1Q9UEE9 299 aaPredicted RBP27.36■■□□□ 1.97
C6orf48-204ENST00000375639 ARHGAP5Q13017 1502 aa27.36■■□□□ 1.97
C6orf48-204ENST00000375639 HECW2Q9P2P5 1572 aa27.35■■□□□ 1.97
C6orf48-204ENST00000375639 PREX2Q70Z35 1606 aa27.34■■□□□ 1.97
C6orf48-204ENST00000375639 CDC42BPBQ9Y5S2 1711 aa27.33■■□□□ 1.97
C6orf48-204ENST00000375639 FANCAO15360 1455 aa27.33■■□□□ 1.97
C6orf48-204ENST00000375639 ZNF777Q9ULD5 760 aaPredicted RBP27.33■■□□□ 1.97
C6orf48-204ENST00000375639 PHLDB1Q86UU1 1377 aa27.33■■□□□ 1.97
C6orf48-204ENST00000375639 ARAP3Q8WWN8 1544 aa27.32■■□□□ 1.96
C6orf48-204ENST00000375639 ITSN2Q9NZM3 1697 aa27.32■■□□□ 1.96
C6orf48-204ENST00000375639 MYOM3Q5VTT5 1437 aa27.31■■□□□ 1.96
C6orf48-204ENST00000375639 NEO1Q92859 1461 aa27.28■■□□□ 1.96
C6orf48-204ENST00000375639 CFAP74Q9C0B2 1584 aa27.26■■□□□ 1.96
C6orf48-204ENST00000375639 AKNAQ7Z591 1439 aa27.26■■□□□ 1.95
C6orf48-204ENST00000375639 ZNF644Q9H582 1327 aaPredicted RBP27.22■■□□□ 1.95
C6orf48-204ENST00000375639 MIA2Q96PC5 1412 aa27.22■■□□□ 1.95
C6orf48-204ENST00000375639 COL17A1Q9UMD9 1497 aaPredicted RBP27.2■■□□□ 1.95
C6orf48-204ENST00000375639 FGD6Q6ZV73 1430 aa27.2■■□□□ 1.94
C6orf48-204ENST00000375639 SAMD9LQ8IVG5 1584 aa27.19■■□□□ 1.94
C6orf48-204ENST00000375639 SCAPERQ9BY12 1400 aa27.18■■□□□ 1.94
C6orf48-204ENST00000375639 CAMSAP2Q08AD1 1489 aa27.15■■□□□ 1.94
C6orf48-204ENST00000375639 PLEKHH2Q8IVE3 1493 aa27.15■■□□□ 1.94
C6orf48-204ENST00000375639 HNRNPMP52272 730 aaKnown RBP eCLIP27.15■■□□□ 1.94
C6orf48-204ENST00000375639 ABCC1P33527 1531 aa27.14■■□□□ 1.94
C6orf48-204ENST00000375639 PTPN23Q9H3S7 1636 aa27.13■■□□□ 1.93
C6orf48-204ENST00000375639 FAM50AQ14320 339 aaKnown RBP27.13■■□□□ 1.93
C6orf48-204ENST00000375639 DENND4BO75064 1496 aaPredicted RBP27.13■■□□□ 1.93
C6orf48-204ENST00000375639 RAPGEF3O95398 923 aa27.12■■□□□ 1.93
C6orf48-204ENST00000375639 SYCP2Q9BX26 1530 aa27.11■■□□□ 1.93
C6orf48-204ENST00000375639 ARHGEF12Q9NZN5 1544 aa27.11■■□□□ 1.93
C6orf48-204ENST00000375639 KIAA1107Q9UPP5 1409 aa27.11■■□□□ 1.93
C6orf48-204ENST00000375639 TCOF1Q13428 1488 aaKnown RBP27.08■■□□□ 1.93
C6orf48-204ENST00000375639 TRAPPC8Q9Y2L5 1435 aa27.07■■□□□ 1.92
C6orf48-204ENST00000375639 AFAP1Q8N556 730 aa27.07■■□□□ 1.92
C6orf48-204ENST00000375639 POGZQ7Z3K3 1410 aa27.06■■□□□ 1.92
C6orf48-204ENST00000375639 MBD5Q9P267 1494 aa27.05■■□□□ 1.92
C6orf48-204ENST00000375639 RRBP1Q9P2E9 1410 aaKnown RBP27.04■■□□□ 1.92
C6orf48-204ENST00000375639 RSPH4AQ5TD94 716 aa27.03■■□□□ 1.92
C6orf48-204ENST00000375639 ZNF518AQ6AHZ1 1483 aa27.03■■□□□ 1.92
C6orf48-204ENST00000375639 FBXO41Q8TF61 875 aa27.03■■□□□ 1.92
C6orf48-204ENST00000375639 RICTORQ6R327 1708 aa27.02■■□□□ 1.92
C6orf48-204ENST00000375639 MYT1LQ9UL68 1186 aa27.01■■□□□ 1.91
C6orf48-204ENST00000375639 FRMPD1Q5SYB0 1578 aa27■■□□□ 1.91
C6orf48-204ENST00000375639 CCDC141Q6ZP82 1450 aa27■■□□□ 1.91
C6orf48-204ENST00000375639 ARHGEF5Q12774 1597 aa26.99■■□□□ 1.91
C6orf48-204ENST00000375639 TSPY4P0CV99 314 aa26.97■■□□□ 1.91
C6orf48-204ENST00000375639 TSPY10P0CW01 314 aa26.97■■□□□ 1.91
C6orf48-204ENST00000375639 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.97■■□□□ 1.914e-7■□□□□ 10.4
C6orf48-204ENST00000375639 SPAG9O60271 1321 aaKnown RBP26.96■■□□□ 1.91
C6orf48-204ENST00000375639 ITGAEP38570 1179 aa26.95■■□□□ 1.9
C6orf48-204ENST00000375639 KDM5CP41229 1560 aa26.94■■□□□ 1.9
C6orf48-204ENST00000375639 ABCC5O15440 1437 aa26.94■■□□□ 1.9
C6orf48-204ENST00000375639 DAPK1P53355 1430 aa26.94■■□□□ 1.9
C6orf48-204ENST00000375639 DNMT1P26358 1616 aaKnown RBP26.93■■□□□ 1.9
C6orf48-204ENST00000375639 ZMYM4Q5VZL5 1548 aa26.92■■□□□ 1.9
C6orf48-204ENST00000375639 MLH3Q9UHC1 1453 aa26.89■■□□□ 1.9
C6orf48-204ENST00000375639 CHIC2Q9UKJ5 165 aa26.89■■□□□ 1.9
C6orf48-204ENST00000375639 MAGI2Q86UL8 1455 aa26.88■■□□□ 1.89
C6orf48-204ENST00000375639 C9orf84Q5VXU9 1444 aa26.87■■□□□ 1.89
C6orf48-204ENST00000375639 YEATS2Q9ULM3 1422 aa26.86■■□□□ 1.89
C6orf48-204ENST00000375639 ATP7AQ04656 1500 aa26.85■■□□□ 1.89
C6orf48-204ENST00000375639 ZFYVE16Q7Z3T8 1539 aa26.85■■□□□ 1.89
C6orf48-204ENST00000375639 RTEL1-TNFRSF6BF6WH68 1400 aa26.85■■□□□ 1.89
C6orf48-204ENST00000375639 CROCC2H7BZ55 1655 aa26.85■■□□□ 1.89
C6orf48-204ENST00000375639 KIDINS220Q9ULH0 1771 aa26.84■■□□□ 1.89
C6orf48-204ENST00000375639 SHANK2Q9UPX8 1470 aa26.84■■□□□ 1.89
C6orf48-204ENST00000375639 INO80Q9ULG1 1556 aaPredicted RBP26.84■■□□□ 1.89
C6orf48-204ENST00000375639 MAST1Q9Y2H9 1570 aa26.83■■□□□ 1.89
C6orf48-204ENST00000375639 PTPRKQ15262 1439 aa26.82■■□□□ 1.88
C6orf48-204ENST00000375639 ARHGEF40Q8TER5 1519 aa26.79■■□□□ 1.88
C6orf48-204ENST00000375639 ABCA6Q8N139 1617 aa26.78■■□□□ 1.88
C6orf48-204ENST00000375639 ANKRD30AQ9BXX3 1397 aa26.77■■□□□ 1.88
C6orf48-204ENST00000375639 RRP7BPQ9NSQ0 103 aa26.77■■□□□ 1.88
C6orf48-204ENST00000375639 DIP2CQ9Y2E4 1556 aa26.76■■□□□ 1.87
C6orf48-204ENST00000375639 ATP10AO60312 1499 aa26.76■■□□□ 1.87
C6orf48-204ENST00000375639 NCOA1Q15788 1441 aa26.73■■□□□ 1.87
C6orf48-204ENST00000375639 TRIM26Q12899 539 aaPredicted RBP26.73■■□□□ 1.87
C6orf48-204ENST00000375639 ADGRL2O95490 1459 aa26.73■■□□□ 1.87
C6orf48-204ENST00000375639 ADGBQ8N7X0 1667 aa26.73■■□□□ 1.87
C6orf48-204ENST00000375639 KIF15Q9NS87 1388 aa26.71■■□□□ 1.87
C6orf48-204ENST00000375639 PLXNC1O60486 1568 aa26.71■■□□□ 1.87
C6orf48-204ENST00000375639 ROCK1Q13464 1354 aa26.71■■□□□ 1.87
C6orf48-204ENST00000375639 A2MP01023 1474 aa26.7■■□□□ 1.87
C6orf48-204ENST00000375639 DHX29Q7Z478 1369 aaKnown RBP26.68■■□□□ 1.86
C6orf48-204ENST00000375639 ARID4BQ4LE39 1312 aaPredicted RBP26.67■■□□□ 1.86
C6orf48-204ENST00000375639 PTPRMP28827 1452 aa26.65■■□□□ 1.86
C6orf48-204ENST00000375639 DUOX2Q9NRD8 1548 aa26.65■■□□□ 1.86
C6orf48-204ENST00000375639 REREQ9P2R6 1566 aa26.64■■□□□ 1.86
C6orf48-204ENST00000375639 ADAMTSL3P82987 1691 aa26.63■■□□□ 1.85
C6orf48-204ENST00000375639 KIF3BO15066 747 aa26.6■■□□□ 1.85
C6orf48-204ENST00000375639 SIGLEC1Q9BZZ2 1709 aa26.59■■□□□ 1.85
C6orf48-204ENST00000375639 ANKRD50Q9ULJ7 1429 aa26.58■■□□□ 1.85
C6orf48-204ENST00000375639 MLECQ14165 292 aa26.58■■□□□ 1.85
C6orf48-204ENST00000375639 AGLP35573 1532 aa26.58■■□□□ 1.85
C6orf48-204ENST00000375639 ERBINQ96RT1 1412 aa26.57■■□□□ 1.84
C6orf48-204ENST00000375639 LMTK3Q96Q04 1460 aa26.57■■□□□ 1.84
C6orf48-204ENST00000375639 NAIPQ13075 1403 aa26.56■■□□□ 1.84
C6orf48-204ENST00000375639 HFM1A2PYH4 1435 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms