RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 CCDC18Q5T9S5 1454 aa27.75■■■□□ 2.03
TMEFF1-201ENST00000374879 NCOA2Q15596 1464 aa27.74■■■□□ 2.03
TMEFF1-201ENST00000374879 KIF21AQ7Z4S6 1674 aa27.73■■■□□ 2.03
TMEFF1-201ENST00000374879 HFM1A2PYH4 1435 aa27.72■■■□□ 2.03
TMEFF1-201ENST00000374879 MYOM3Q5VTT5 1437 aa27.71■■■□□ 2.03
TMEFF1-201ENST00000374879 KDM5BQ9UGL1 1544 aa27.71■■■□□ 2.03
TMEFF1-201ENST00000374879 SMG6Q86US8 1419 aaKnown RBP27.7■■■□□ 2.03
TMEFF1-201ENST00000374879 THOC2Q8NI27 1593 aaKnown RBP27.7■■■□□ 2.02
TMEFF1-201ENST00000374879 RNF123Q5XPI4 1314 aa27.69■■■□□ 2.02
TMEFF1-201ENST00000374879 SUPT6HQ7KZ85 1726 aaKnown RBP27.68■■■□□ 2.02
TMEFF1-201ENST00000374879 PTPN23Q9H3S7 1636 aa27.68■■■□□ 2.02
TMEFF1-201ENST00000374879 UACAQ9BZF9 1416 aa27.67■■■□□ 2.02
TMEFF1-201ENST00000374879 TARBP1Q13395 1621 aaKnown RBP27.67■■■□□ 2.02
TMEFF1-201ENST00000374879 EHBP1L1Q8N3D4 1523 aa27.67■■■□□ 2.02
TMEFF1-201ENST00000374879 PPM1GO15355 546 aaPredicted RBP27.65■■■□□ 2.02
TMEFF1-201ENST00000374879 NUDCQ9Y266 331 aa27.64■■■□□ 2.02
TMEFF1-201ENST00000374879 NAIPQ13075 1403 aa27.64■■■□□ 2.01
TMEFF1-201ENST00000374879 EIF4G2P78344 907 aaKnown RBP eCLIP27.62■■■□□ 2.01
TMEFF1-201ENST00000374879 GSE1Q14687 1217 aa27.61■■■□□ 2.01
TMEFF1-201ENST00000374879 UGGT2Q9NYU1 1516 aa27.59■■■□□ 2.01
TMEFF1-201ENST00000374879 MAGI3Q5TCQ9 1506 aa27.59■■■□□ 2.01
TMEFF1-201ENST00000374879 PDE4AP27815 886 aa27.57■■■□□ 2
TMEFF1-201ENST00000374879 ARHGEF11O15085 1522 aa27.55■■■□□ 2
TMEFF1-201ENST00000374879 PBRM1Q86U86 1689 aa27.55■■■□□ 2
TMEFF1-201ENST00000374879 CCDC7Q96M83 1385 aa27.55■■■□□ 2
TMEFF1-201ENST00000374879 TCERG1O14776 1098 aaKnown RBP27.53■■■□□ 2
TMEFF1-201ENST00000374879 IQGAP2Q13576 1575 aa27.51■■□□□ 1.99
TMEFF1-201ENST00000374879 HECW1Q76N89 1606 aa27.51■■□□□ 1.99
TMEFF1-201ENST00000374879 BACH2Q9BYV9 841 aa27.51■■□□□ 1.99
TMEFF1-201ENST00000374879 SENP3-EIF4A1A0A087X0R7 540 aa27.51■■□□□ 1.99
TMEFF1-201ENST00000374879 NCOA1Q15788 1441 aa27.5■■□□□ 1.99
TMEFF1-201ENST00000374879 RRP7BPQ9NSQ0 103 aa27.5■■□□□ 1.99
TMEFF1-201ENST00000374879 FRAT1Q92837 279 aaPredicted RBP27.49■■□□□ 1.99
TMEFF1-201ENST00000374879 CHIC2Q9UKJ5 165 aa27.49■■□□□ 1.99
TMEFF1-201ENST00000374879 EPRSP07814 1512 aaKnown RBP27.47■■□□□ 1.99
TMEFF1-201ENST00000374879 ADAMTS12P58397 1594 aa27.46■■□□□ 1.99
TMEFF1-201ENST00000374879 TCOF1Q13428 1488 aaKnown RBP27.46■■□□□ 1.99
TMEFF1-201ENST00000374879 NFKBIBQ15653 356 aa27.45■■□□□ 1.98
TMEFF1-201ENST00000374879 PKNOX2Q96KN3 472 aa27.45■■□□□ 1.98
TMEFF1-201ENST00000374879 RSPH6AQ9H0K4 717 aa27.44■■□□□ 1.98
TMEFF1-201ENST00000374879 ARID3CA6NKF2 412 aa27.42■■□□□ 1.98
TMEFF1-201ENST00000374879 CDK13Q14004 1512 aaKnown RBP27.42■■□□□ 1.98
TMEFF1-201ENST00000374879 MRC2Q9UBG0 1479 aa27.4■■□□□ 1.98
TMEFF1-201ENST00000374879 CNGB1Q14028 1251 aaPredicted RBP27.4■■□□□ 1.98
TMEFF1-201ENST00000374879 EXOC6Q8TAG9 804 aa27.39■■□□□ 1.98
TMEFF1-201ENST00000374879 GCC2Q8IWJ2 1684 aa27.39■■□□□ 1.97
TMEFF1-201ENST00000374879 WDR62O43379 1518 aa27.37■■□□□ 1.97
TMEFF1-201ENST00000374879 MS4A1P11836 297 aa27.37■■□□□ 1.97
TMEFF1-201ENST00000374879 KIF7Q2M1P5 1343 aa27.36■■□□□ 1.97
TMEFF1-201ENST00000374879 MIA2Q96PC5 1412 aa27.35■■□□□ 1.97
TMEFF1-201ENST00000374879 DENND4BO75064 1496 aaPredicted RBP27.33■■□□□ 1.97
TMEFF1-201ENST00000374879 DDRGK1Q96HY6 314 aa27.33■■□□□ 1.97
TMEFF1-201ENST00000374879 KDM6BO15054 1643 aa27.33■■□□□ 1.97
TMEFF1-201ENST00000374879 FAM43AQ8N2R8 423 aa27.33■■□□□ 1.97
TMEFF1-201ENST00000374879 L3MBTL2Q969R5 705 aa27.32■■□□□ 1.96
TMEFF1-201ENST00000374879 SLC4A3P48751 1232 aa27.31■■□□□ 1.96
TMEFF1-201ENST00000374879 RRP1P56182 461 aaKnown RBP27.3■■□□□ 1.96
TMEFF1-201ENST00000374879 ZNF608Q9ULD9 1512 aaPredicted RBP27.3■■□□□ 1.96
TMEFF1-201ENST00000374879 DCAF11Q8TEB1 546 aa27.26■■□□□ 1.95
TMEFF1-201ENST00000374879 MPHOSPH9Q99550 1183 aa27.26■■□□□ 1.95
TMEFF1-201ENST00000374879 IFT140Q96RY7 1462 aa27.25■■□□□ 1.95
TMEFF1-201ENST00000374879 SKAP1Q86WV1 359 aa27.23■■□□□ 1.95
TMEFF1-201ENST00000374879 KIAA0586Q9BVV6 1533 aa27.22■■□□□ 1.95
TMEFF1-201ENST00000374879 NBPF8Q3BBV2 869 aa27.22■■□□□ 1.95
TMEFF1-201ENST00000374879 DHX29Q7Z478 1369 aaKnown RBP27.22■■□□□ 1.95
TMEFF1-201ENST00000374879 KIAA0556O60303 1618 aa27.21■■□□□ 1.95
TMEFF1-201ENST00000374879 PNISRQ8TF01 805 aaKnown RBP27.21■■□□□ 1.95
TMEFF1-201ENST00000374879 DISP1Q96F81 1524 aa27.21■■□□□ 1.95
TMEFF1-201ENST00000374879 FOXD1Q16676 465 aa27.2■■□□□ 1.94
TMEFF1-201ENST00000374879 DAPK1P53355 1430 aa27.18■■□□□ 1.94
TMEFF1-201ENST00000374879 SPATA31E1Q6ZUB1 1445 aa27.17■■□□□ 1.94
TMEFF1-201ENST00000374879 NUP153P49790 1475 aaKnown RBP27.17■■□□□ 1.94
TMEFF1-201ENST00000374879 FRAT2O75474 233 aaPredicted RBP27.16■■□□□ 1.94
TMEFF1-201ENST00000374879 RCAN3Q9UKA8 241 aa27.16■■□□□ 1.94
TMEFF1-201ENST00000374879 DAXXQ9UER7 740 aaPredicted RBP27.15■■□□□ 1.94
TMEFF1-201ENST00000374879 ZNF644Q9H582 1327 aaPredicted RBP27.15■■□□□ 1.94
TMEFF1-201ENST00000374879 ROCK1Q13464 1354 aa27.15■■□□□ 1.94
TMEFF1-201ENST00000374879 POLR1AO95602 1720 aaPredicted RBP27.14■■□□□ 1.94
TMEFF1-201ENST00000374879 ABCC5O15440 1437 aa27.14■■□□□ 1.93
TMEFF1-201ENST00000374879 RAPGEF6Q8TEU7 1601 aa27.12■■□□□ 1.93
TMEFF1-201ENST00000374879 GRIN2AQ12879 1464 aa27.12■■□□□ 1.93
TMEFF1-201ENST00000374879 TMC1Q8TDI8 760 aa27.12■■□□□ 1.93
TMEFF1-201ENST00000374879 DNMT1P26358 1616 aaKnown RBP27.12■■□□□ 1.93
TMEFF1-201ENST00000374879 POLR3GLQ9BT43 218 aa27.11■■□□□ 1.93
TMEFF1-201ENST00000374879 GLIPR1L2Q4G1C9 344 aa27.1■■□□□ 1.93
TMEFF1-201ENST00000374879 EIF4G3O43432 1585 aaKnown RBP27.08■■□□□ 1.93
TMEFF1-201ENST00000374879 ZMYND15Q9H091 742 aa27.07■■□□□ 1.92
TMEFF1-201ENST00000374879 ANKRD30BQ9BXX2 1392 aa27.07■■□□□ 1.92
TMEFF1-201ENST00000374879 RRAGDQ9NQL2 400 aaPredicted RBP27.06■■□□□ 1.92
TMEFF1-201ENST00000374879 VSIG10Q8N0Z9 540 aa27.06■■□□□ 1.92
TMEFF1-201ENST00000374879 RPRD2Q5VT52 1461 aaKnown RBP27.04■■□□□ 1.92
TMEFF1-201ENST00000374879 SLC4A1APQ9BWU0 796 aaKnown RBP27.04■■□□□ 1.92
TMEFF1-201ENST00000374879 PRG4Q92954 1404 aaPredicted RBP27.02■■□□□ 1.92
TMEFF1-201ENST00000374879 PLIN1O60240 522 aa27.01■■□□□ 1.91
TMEFF1-201ENST00000374879 LRPPRCP42704 1394 aaKnown RBP27■■□□□ 1.91
TMEFF1-201ENST00000374879 TROQ12816 1431 aaPredicted RBP26.99■■□□□ 1.91
TMEFF1-201ENST00000374879 TEX14Q8IWB6 1497 aa26.98■■□□□ 1.91
TMEFF1-201ENST00000374879 CFDP1Q9UEE9 299 aaPredicted RBP26.98■■□□□ 1.91
TMEFF1-201ENST00000374879 CHMP7Q8WUX9 453 aaPredicted RBP26.98■■□□□ 1.91
TMEFF1-201ENST00000374879 PLB1Q6P1J6 1458 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms