RNA–Protein interactions for RNA: ENST00000374704.7

CCNY-203, Transcript of cyclin Y, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCNY, Length 3,960 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-203ENST00000374704 MYOM3Q5VTT5 1437 aa17.65■□□□□ 0.42
CCNY-203ENST00000374704 MSH5O43196 834 aa17.64■□□□□ 0.41
CCNY-203ENST00000374704 NUDCQ9Y266 331 aa17.63■□□□□ 0.41
CCNY-203ENST00000374704 CASKIN1Q8WXD9 1431 aa17.63■□□□□ 0.41
CCNY-203ENST00000374704 CCDC7Q96M83 1385 aa17.63■□□□□ 0.41
CCNY-203ENST00000374704 MAPKBP1O60336 1514 aa17.62■□□□□ 0.41
CCNY-203ENST00000374704 EXOC6Q8TAG9 804 aa17.61■□□□□ 0.41
CCNY-203ENST00000374704 KNSTRNQ9Y448 316 aa17.61■□□□□ 0.41
CCNY-203ENST00000374704 GAPVD1Q14C86 1478 aa17.61■□□□□ 0.41
CCNY-203ENST00000374704 RCAN3Q9UKA8 241 aa17.6■□□□□ 0.41
CCNY-203ENST00000374704 PTPRKQ15262 1439 aa17.6■□□□□ 0.41
CCNY-203ENST00000374704 NEFMP07197 916 aa17.59■□□□□ 0.41
CCNY-203ENST00000374704 POLA1P09884 1462 aaPredicted RBP17.58■□□□□ 0.41
CCNY-203ENST00000374704 USP47Q96K76 1375 aa17.58■□□□□ 0.4
CCNY-203ENST00000374704 JPH4Q96JJ6 628 aa17.58■□□□□ 0.4
CCNY-203ENST00000374704 NAIPQ13075 1403 aa17.57■□□□□ 0.4
CCNY-203ENST00000374704 ZBED9Q6R2W3 1325 aa17.57■□□□□ 0.4
CCNY-203ENST00000374704 ROCK2O75116 1388 aaKnown RBP17.57■□□□□ 0.4
CCNY-203ENST00000374704 SLC4A3P48751 1232 aa17.56■□□□□ 0.4
CCNY-203ENST00000374704 FRAT1Q92837 279 aaPredicted RBP17.55■□□□□ 0.4
CCNY-203ENST00000374704 EIF5BO60841 1220 aaKnown RBP17.55■□□□□ 0.4
CCNY-203ENST00000374704 PCF11O94913 1555 aaKnown RBP17.55■□□□□ 0.4
CCNY-203ENST00000374704 AKNAQ7Z591 1439 aa17.55■□□□□ 0.4
CCNY-203ENST00000374704 SKAP1Q86WV1 359 aa17.55■□□□□ 0.4
CCNY-203ENST00000374704 CCDC146Q8IYE0 955 aa17.55■□□□□ 0.4
CCNY-203ENST00000374704 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
CCNY-203ENST00000374704 CDCA7LQ96GN5 454 aa17.54■□□□□ 0.4
CCNY-203ENST00000374704 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
CCNY-203ENST00000374704 HFM1A2PYH4 1435 aa17.52■□□□□ 0.4
CCNY-203ENST00000374704 ERCC6Q03468 1493 aa17.51■□□□□ 0.39
CCNY-203ENST00000374704 SAFB2Q14151 953 aaKnown RBP eCLIP17.51■□□□□ 0.39
CCNY-203ENST00000374704 PANK3Q9H999 370 aa17.51■□□□□ 0.39
CCNY-203ENST00000374704 TOPBP1Q92547 1522 aa17.5■□□□□ 0.39
CCNY-203ENST00000374704 CNTLNQ9NXG0 1405 aa17.5■□□□□ 0.39
CCNY-203ENST00000374704 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
CCNY-203ENST00000374704 NBPF1Q3BBV0 1214 aa17.49■□□□□ 0.39
CCNY-203ENST00000374704 ANKRD30AQ9BXX3 1397 aa17.49■□□□□ 0.39
CCNY-203ENST00000374704 TMF1P82094 1093 aa17.48■□□□□ 0.39
CCNY-203ENST00000374704 PLPPR3Q6T4P5 718 aa17.47■□□□□ 0.39
CCNY-203ENST00000374704 NUTM2DQ5VT03 806 aaPredicted RBP17.46■□□□□ 0.38
CCNY-203ENST00000374704 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.46■□□□□ 0.38
CCNY-203ENST00000374704 IPO9Q96P70 1041 aaKnown RBP17.46■□□□□ 0.38
CCNY-203ENST00000374704 CDK13Q14004 1512 aaKnown RBP17.46■□□□□ 0.38
CCNY-203ENST00000374704 KTN1Q86UP2 1357 aaKnown RBP17.45■□□□□ 0.38
CCNY-203ENST00000374704 ERICH6BQ5W0A0 696 aa17.45■□□□□ 0.38
CCNY-203ENST00000374704 NLRP13Q86W25 1043 aa17.44■□□□□ 0.38
CCNY-203ENST00000374704 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
CCNY-203ENST00000374704 FANCIQ9NVI1 1328 aa17.44■□□□□ 0.38
CCNY-203ENST00000374704 PPM1GO15355 546 aaPredicted RBP17.43■□□□□ 0.38
CCNY-203ENST00000374704 SLC24A1O60721 1099 aa17.43■□□□□ 0.38
CCNY-203ENST00000374704 SPRYD3Q8NCJ5 442 aa17.43■□□□□ 0.38
CCNY-203ENST00000374704 PRG4Q92954 1404 aaPredicted RBP17.43■□□□□ 0.38
CCNY-203ENST00000374704 RALBP1Q15311 655 aa17.42■□□□□ 0.38
CCNY-203ENST00000374704 CRBNQ96SW2 442 aa17.42■□□□□ 0.38
CCNY-203ENST00000374704 RRP1P56182 461 aaKnown RBP17.41■□□□□ 0.38
CCNY-203ENST00000374704 BIVM-ERCC5R4GMW8 1640 aa17.41■□□□□ 0.38
CCNY-203ENST00000374704 MYBBP1AQ9BQG0 1328 aaKnown RBP17.4■□□□□ 0.38
CCNY-203ENST00000374704 PDE4AP27815 886 aa17.4■□□□□ 0.38
CCNY-203ENST00000374704 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
CCNY-203ENST00000374704 RRP7AQ9Y3A4 280 aaKnown RBP17.39■□□□□ 0.38
CCNY-203ENST00000374704 PNISRQ8TF01 805 aaKnown RBP17.39■□□□□ 0.37
CCNY-203ENST00000374704 CLUAP1Q96AJ1 413 aa17.38■□□□□ 0.37
CCNY-203ENST00000374704 BCL2L13Q9BXK5 485 aa17.37■□□□□ 0.37
CCNY-203ENST00000374704 STAG3Q9UJ98 1225 aa17.36■□□□□ 0.37
CCNY-203ENST00000374704 GGT6Q6P531 493 aa17.35■□□□□ 0.37
CCNY-203ENST00000374704 KIF15Q9NS87 1388 aa17.35■□□□□ 0.37
CCNY-203ENST00000374704 ANKRD50Q9ULJ7 1429 aa17.33■□□□□ 0.37
CCNY-203ENST00000374704 U2SURPO15042 1029 aaKnown RBP17.33■□□□□ 0.36
CCNY-203ENST00000374704 PRDM2Q13029 1718 aa17.33■□□□□ 0.36
CCNY-203ENST00000374704 CARMIL2Q6F5E8 1435 aa17.33■□□□□ 0.36
CCNY-203ENST00000374704 ADAMTS8Q9UP79 889 aa17.32■□□□□ 0.36
CCNY-203ENST00000374704 KIF3BO15066 747 aa17.32■□□□□ 0.36
CCNY-203ENST00000374704 SLKQ9H2G2 1235 aaPredicted RBP17.32■□□□□ 0.36
CCNY-203ENST00000374704 UPF2Q9HAU5 1272 aaKnown RBP17.32■□□□□ 0.36
CCNY-203ENST00000374704 STK26Q9P289 416 aa17.32■□□□□ 0.36
CCNY-203ENST00000374704 TCERG1O14776 1098 aaKnown RBP17.31■□□□□ 0.36
CCNY-203ENST00000374704 ANKRD30BQ9BXX2 1392 aa17.31■□□□□ 0.36
CCNY-203ENST00000374704 APAF1O14727 1248 aa17.31■□□□□ 0.36
CCNY-203ENST00000374704 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
CCNY-203ENST00000374704 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
CCNY-203ENST00000374704 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.29■□□□□ 0.36
CCNY-203ENST00000374704 CCDC144AA2RUR9 1427 aa17.29■□□□□ 0.36
CCNY-203ENST00000374704 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCNY-203ENST00000374704 HSP90AA1P07900 732 aaKnown RBP17.29■□□□□ 0.36
CCNY-203ENST00000374704 DDRGK1Q96HY6 314 aa17.28■□□□□ 0.36
CCNY-203ENST00000374704 EPRSP07814 1512 aaKnown RBP17.28■□□□□ 0.36
CCNY-203ENST00000374704 GOLGA2Q08379 1002 aa17.28■□□□□ 0.36
CCNY-203ENST00000374704 TRAK1Q9UPV9 953 aa17.28■□□□□ 0.36
CCNY-203ENST00000374704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.28■□□□□ 0.366e-6■□□□□ 9.1
CCNY-203ENST00000374704 CDCA8Q53HL2 280 aa17.28■□□□□ 0.36
CCNY-203ENST00000374704 DAPK1P53355 1430 aa17.27■□□□□ 0.36
CCNY-203ENST00000374704 EFCAB5A4FU69 1503 aa17.27■□□□□ 0.36
CCNY-203ENST00000374704 MORC1Q86VD1 984 aa17.27■□□□□ 0.35
CCNY-203ENST00000374704 URB2Q14146 1524 aaKnown RBP17.25■□□□□ 0.35
CCNY-203ENST00000374704 PTPN23Q9H3S7 1636 aa17.25■□□□□ 0.35
CCNY-203ENST00000374704 MAP3K1Q13233 1512 aa17.25■□□□□ 0.35
CCNY-203ENST00000374704 ABCC5O15440 1437 aa17.24■□□□□ 0.35
CCNY-203ENST00000374704 C20orf194Q5TEA3 1177 aa17.24■□□□□ 0.35
CCNY-203ENST00000374704 FTSJ3Q8IY81 847 aaKnown RBP17.24■□□□□ 0.35
CCNY-203ENST00000374704 AFAP1Q8N556 730 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms