RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 TIMELESSQ9UNS1 1208 aa23.91■■□□□ 1.42
LDLRAP1-201ENST00000374338 PRG4Q92954 1404 aaPredicted RBP23.91■■□□□ 1.42
LDLRAP1-201ENST00000374338 ERICH6BQ5W0A0 696 aa23.9■■□□□ 1.42
LDLRAP1-201ENST00000374338 CDK11AQ9UQ88 783 aaPredicted RBP23.9■■□□□ 1.42
LDLRAP1-201ENST00000374338 DENND4BO75064 1496 aaPredicted RBP23.89■■□□□ 1.42
LDLRAP1-201ENST00000374338 SLC4A1APQ9BWU0 796 aaKnown RBP23.89■■□□□ 1.41
LDLRAP1-201ENST00000374338 HECW1Q76N89 1606 aa23.89■■□□□ 1.41
LDLRAP1-201ENST00000374338 POLR3GLQ9BT43 218 aa23.88■■□□□ 1.41
LDLRAP1-201ENST00000374338 PLB1Q6P1J6 1458 aa23.87■■□□□ 1.41
LDLRAP1-201ENST00000374338 DISP1Q96F81 1524 aa23.87■■□□□ 1.41
LDLRAP1-201ENST00000374338 SENP3-EIF4A1A0A087X0R7 540 aa23.87■■□□□ 1.41
LDLRAP1-201ENST00000374338 CFDP1Q9UEE9 299 aaPredicted RBP23.86■■□□□ 1.41
LDLRAP1-201ENST00000374338 C11orf95C9JLR9 678 aaPredicted RBP23.86■■□□□ 1.41
LDLRAP1-201ENST00000374338 WDR62O43379 1518 aa23.86■■□□□ 1.41
LDLRAP1-201ENST00000374338 IFT140Q96RY7 1462 aa23.85■■□□□ 1.41
LDLRAP1-201ENST00000374338 JPH4Q96JJ6 628 aa23.83■■□□□ 1.41
LDLRAP1-201ENST00000374338 NUP153P49790 1475 aaKnown RBP23.83■■□□□ 1.41
LDLRAP1-201ENST00000374338 ARHGEF11O15085 1522 aa23.83■■□□□ 1.41
LDLRAP1-201ENST00000374338 WASHC2AQ641Q2 1341 aa23.83■■□□□ 1.41
LDLRAP1-201ENST00000374338 NBPF8Q3BBV2 869 aa23.82■■□□□ 1.4
LDLRAP1-201ENST00000374338 CCDC136Q96JN2 1154 aa23.82■■□□□ 1.4
LDLRAP1-201ENST00000374338 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
LDLRAP1-201ENST00000374338 CCDC184Q52MB2 194 aa23.81■■□□□ 1.4
LDLRAP1-201ENST00000374338 EIF4G3O43432 1585 aaKnown RBP23.8■■□□□ 1.4
LDLRAP1-201ENST00000374338 KIAA0586Q9BVV6 1533 aa23.79■■□□□ 1.4
LDLRAP1-201ENST00000374338 ABCC5O15440 1437 aa23.78■■□□□ 1.4
LDLRAP1-201ENST00000374338 HNRNPUQ00839 825 aaKnown RBP eCLIP23.77■■□□□ 1.4
LDLRAP1-201ENST00000374338 KDM5BQ9UGL1 1544 aa23.76■■□□□ 1.39
LDLRAP1-201ENST00000374338 DAPK1P53355 1430 aa23.76■■□□□ 1.39
LDLRAP1-201ENST00000374338 KIAA0556O60303 1618 aa23.76■■□□□ 1.39
LDLRAP1-201ENST00000374338 UBE2Q2Q8WVN8 375 aa23.75■■□□□ 1.39
LDLRAP1-201ENST00000374338 EIF4G2P78344 907 aaKnown RBP eCLIP23.75■■□□□ 1.39
LDLRAP1-201ENST00000374338 NBR1Q14596 966 aa23.75■■□□□ 1.39
LDLRAP1-201ENST00000374338 TCOF1Q13428 1488 aaKnown RBP23.75■■□□□ 1.39
LDLRAP1-201ENST00000374338 MIA2Q96PC5 1412 aa23.7■■□□□ 1.38
LDLRAP1-201ENST00000374338 FAM9BQ8IZU0 186 aa23.69■■□□□ 1.38
LDLRAP1-201ENST00000374338 CEP170Q5SW79 1584 aa23.68■■□□□ 1.38
LDLRAP1-201ENST00000374338 HNRNPMP52272 730 aaKnown RBP eCLIP23.68■■□□□ 1.38
LDLRAP1-201ENST00000374338 CCER2I3L3R5 266 aa23.67■■□□□ 1.38
LDLRAP1-201ENST00000374338 PKD2Q13563 968 aa23.66■■□□□ 1.38
LDLRAP1-201ENST00000374338 KDM2AQ9Y2K7 1162 aa23.66■■□□□ 1.38
LDLRAP1-201ENST00000374338 RAPGEF6Q8TEU7 1601 aa23.66■■□□□ 1.38
LDLRAP1-201ENST00000374338 NOP58Q9Y2X3 529 aaKnown RBP23.66■■□□□ 1.38
LDLRAP1-201ENST00000374338 PLEKHD1A6NEE1 506 aa23.65■■□□□ 1.38
LDLRAP1-201ENST00000374338 IL27Q8NEV9 243 aa23.65■■□□□ 1.38
LDLRAP1-201ENST00000374338 B4GALNT3Q6L9W6 998 aa23.64■■□□□ 1.38
LDLRAP1-201ENST00000374338 KIF14Q15058 1648 aa23.64■■□□□ 1.37
LDLRAP1-201ENST00000374338 ANKRD30BQ9BXX2 1392 aa23.63■■□□□ 1.37
LDLRAP1-201ENST00000374338 PAK3O75914 559 aaPredicted RBP23.61■■□□□ 1.37
LDLRAP1-201ENST00000374338 GCC2Q8IWJ2 1684 aa23.61■■□□□ 1.37
LDLRAP1-201ENST00000374338 CAMSAP2Q08AD1 1489 aa23.6■■□□□ 1.37
LDLRAP1-201ENST00000374338 TROQ12816 1431 aaPredicted RBP23.6■■□□□ 1.37
LDLRAP1-201ENST00000374338 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.6■■□□□ 1.37
LDLRAP1-201ENST00000374338 SYNJ2O15056 1496 aa23.59■■□□□ 1.37
LDLRAP1-201ENST00000374338 GPATCH8Q9UKJ3 1502 aaKnown RBP23.58■■□□□ 1.37
LDLRAP1-201ENST00000374338 RTN4Q9NQC3 1192 aaKnown RBP23.57■■□□□ 1.36
LDLRAP1-201ENST00000374338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.54■■□□□ 1.36
LDLRAP1-201ENST00000374338 AKNAQ7Z591 1439 aa23.54■■□□□ 1.36
LDLRAP1-201ENST00000374338 NCOA1Q15788 1441 aa23.54■■□□□ 1.36
LDLRAP1-201ENST00000374338 CARMIL2Q6F5E8 1435 aa23.53■■□□□ 1.36
LDLRAP1-201ENST00000374338 MRS2Q9HD23 443 aa23.53■■□□□ 1.36
LDLRAP1-201ENST00000374338 KIF7Q2M1P5 1343 aa23.52■■□□□ 1.36
LDLRAP1-201ENST00000374338 DNMT1P26358 1616 aaKnown RBP23.52■■□□□ 1.36
LDLRAP1-201ENST00000374338 MAGI1Q96QZ7 1491 aaPredicted RBP23.52■■□□□ 1.36
LDLRAP1-201ENST00000374338 NUP155O75694 1391 aa23.51■■□□□ 1.35
LDLRAP1-201ENST00000374338 CCDC7Q96M83 1385 aa23.5■■□□□ 1.35
LDLRAP1-201ENST00000374338 ROCK1Q13464 1354 aa23.5■■□□□ 1.35
LDLRAP1-201ENST00000374338 TSPY4P0CV99 314 aa23.49■■□□□ 1.35
LDLRAP1-201ENST00000374338 TSPY10P0CW01 314 aa23.49■■□□□ 1.35
LDLRAP1-201ENST00000374338 RPRD2Q5VT52 1461 aaKnown RBP23.49■■□□□ 1.35
LDLRAP1-201ENST00000374338 RGL3Q3MIN7 710 aa23.49■■□□□ 1.35
LDLRAP1-201ENST00000374338 PPP4R2Q9NY27 417 aa23.49■■□□□ 1.35
LDLRAP1-201ENST00000374338 PRKRIP1Q9H875 184 aaPredicted RBP23.48■■□□□ 1.35
LDLRAP1-201ENST00000374338 PZPP20742 1482 aa23.48■■□□□ 1.35
LDLRAP1-201ENST00000374338 ATP10BO94823 1461 aa23.47■■□□□ 1.35
LDLRAP1-201ENST00000374338 RTL5Q5HYW3 569 aaPredicted RBP23.47■■□□□ 1.35
LDLRAP1-201ENST00000374338 TEX14Q8IWB6 1497 aa23.44■■□□□ 1.34
LDLRAP1-201ENST00000374338 ANKRD50Q9ULJ7 1429 aa23.44■■□□□ 1.34
LDLRAP1-201ENST00000374338 DCAF11Q8TEB1 546 aa23.44■■□□□ 1.34
LDLRAP1-201ENST00000374338 ANKRD30AQ9BXX3 1397 aa23.44■■□□□ 1.34
LDLRAP1-201ENST00000374338 PTPRGP23470 1445 aa23.42■■□□□ 1.34
LDLRAP1-201ENST00000374338 NUP160Q12769 1436 aa23.42■■□□□ 1.34
LDLRAP1-201ENST00000374338 CNTLNQ9NXG0 1405 aa23.42■■□□□ 1.34
LDLRAP1-201ENST00000374338 CARD11Q9BXL7 1154 aa23.38■■□□□ 1.33
LDLRAP1-201ENST00000374338 C9orf84Q5VXU9 1444 aa23.37■■□□□ 1.33
LDLRAP1-201ENST00000374338 USP47Q96K76 1375 aa23.36■■□□□ 1.33
LDLRAP1-201ENST00000374338 KIAA1107Q9UPP5 1409 aa23.36■■□□□ 1.33
LDLRAP1-201ENST00000374338 KIF15Q9NS87 1388 aa23.34■■□□□ 1.33
LDLRAP1-201ENST00000374338 ST20-MTHFSA0A0A6YYL1 179 aa23.34■■□□□ 1.33
LDLRAP1-201ENST00000374338 IPO9Q96P70 1041 aaKnown RBP23.32■■□□□ 1.32
LDLRAP1-201ENST00000374338 SPATA31E1Q6ZUB1 1445 aa23.3■■□□□ 1.32
LDLRAP1-201ENST00000374338 CDC42BPAQ5VT25 1732 aa23.28■■□□□ 1.32
LDLRAP1-201ENST00000374338 ABCC10Q5T3U5 1492 aa23.27■■□□□ 1.32
LDLRAP1-201ENST00000374338 NBPF1Q3BBV0 1214 aa23.27■■□□□ 1.32
LDLRAP1-201ENST00000374338 ERCC6L2Q5T890 1561 aa23.27■■□□□ 1.32
LDLRAP1-201ENST00000374338 ZBTB47Q9UFB7 747 aaPredicted RBP23.27■■□□□ 1.32
LDLRAP1-201ENST00000374338 ABCA8O94911 1581 aa23.26■■□□□ 1.31
LDLRAP1-201ENST00000374338 ITSN2Q9NZM3 1697 aa23.26■■□□□ 1.31
LDLRAP1-201ENST00000374338 ANP32AP39687 249 aaKnown RBP23.26■■□□□ 1.31
LDLRAP1-201ENST00000374338 BCORL1Q5H9F3 1711 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms