RNA–Protein interactions for RNA: ENST00000373741.8

PUM1-202, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-202ENST00000373741 SUPT6HQ7KZ85 1726 aaKnown RBP16.42■□□□□ 0.22
PUM1-202ENST00000373741 TROQ12816 1431 aaPredicted RBP16.4■□□□□ 0.22
PUM1-202ENST00000373741 CFAP43Q8NDM7 1665 aa16.4■□□□□ 0.22
PUM1-202ENST00000373741 PTPRKQ15262 1439 aa16.39■□□□□ 0.21
PUM1-202ENST00000373741 RAPGEF6Q8TEU7 1601 aa16.39■□□□□ 0.21
PUM1-202ENST00000373741 CHD1O14646 1710 aa16.38■□□□□ 0.21
PUM1-202ENST00000373741 ARHGEF11O15085 1522 aa16.37■□□□□ 0.21
PUM1-202ENST00000373741 UACAQ9BZF9 1416 aa16.37■□□□□ 0.21
PUM1-202ENST00000373741 MPHOSPH9Q99550 1183 aa16.37■□□□□ 0.21
PUM1-202ENST00000373741 ATP10BO94823 1461 aa16.36■□□□□ 0.21
PUM1-202ENST00000373741 KDM2AQ9Y2K7 1162 aa16.35■□□□□ 0.21
PUM1-202ENST00000373741 ERCC6L2Q5T890 1561 aa16.34■□□□□ 0.21
PUM1-202ENST00000373741 CLSPNQ9HAW4 1339 aa16.33■□□□□ 0.2
PUM1-202ENST00000373741 PTPN23Q9H3S7 1636 aa16.32■□□□□ 0.2
PUM1-202ENST00000373741 EFCAB2Q5VUJ9 269 aa16.32■□□□□ 0.2
PUM1-202ENST00000373741 DDX10Q13206 875 aaKnown RBP16.31■□□□□ 0.2
PUM1-202ENST00000373741 RGL3Q3MIN7 710 aa16.31■□□□□ 0.2
PUM1-202ENST00000373741 NEFLP07196 543 aa16.31■□□□□ 0.2
PUM1-202ENST00000373741 PKD2Q13563 968 aa16.31■□□□□ 0.2
PUM1-202ENST00000373741 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
PUM1-202ENST00000373741 AFAP1Q8N556 730 aa16.29■□□□□ 0.2
PUM1-202ENST00000373741 LRRIQ1Q96JM4 1722 aa16.29■□□□□ 0.2
PUM1-202ENST00000373741 NAIPQ13075 1403 aa16.28■□□□□ 0.2
PUM1-202ENST00000373741 ANKRD30AQ9BXX3 1397 aa16.28■□□□□ 0.2
PUM1-202ENST00000373741 NUP155O75694 1391 aa16.27■□□□□ 0.2
PUM1-202ENST00000373741 MIA2Q96PC5 1412 aa16.26■□□□□ 0.19
PUM1-202ENST00000373741 DAPK1P53355 1430 aa16.25■□□□□ 0.19
PUM1-202ENST00000373741 HFM1A2PYH4 1435 aa16.25■□□□□ 0.19
PUM1-202ENST00000373741 GPATCH8Q9UKJ3 1502 aaKnown RBP16.25■□□□□ 0.19
PUM1-202ENST00000373741 SUPT16HQ9Y5B9 1047 aaKnown RBP16.24■□□□□ 0.19
PUM1-202ENST00000373741 ARHGAP5Q13017 1502 aa16.24■□□□□ 0.19
PUM1-202ENST00000373741 ABCC5O15440 1437 aa16.24■□□□□ 0.19
PUM1-202ENST00000373741 KIF14Q15058 1648 aa16.23■□□□□ 0.19
PUM1-202ENST00000373741 CAMSAP2Q08AD1 1489 aa16.23■□□□□ 0.19
PUM1-202ENST00000373741 CHGAP10645 457 aaKnown RBP16.22■□□□□ 0.19
PUM1-202ENST00000373741 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.21■□□□□ 0.191e-9■■■□□ 15.4
PUM1-202ENST00000373741 L3MBTL2Q969R5 705 aa16.21■□□□□ 0.18
PUM1-202ENST00000373741 SPAG9O60271 1321 aaKnown RBP16.2■□□□□ 0.18
PUM1-202ENST00000373741 PPP1R15AO75807 674 aaPredicted RBP16.2■□□□□ 0.18
PUM1-202ENST00000373741 TSHZ2Q9NRE2 1034 aa16.2■□□□□ 0.18
PUM1-202ENST00000373741 KIF15Q9NS87 1388 aa16.2■□□□□ 0.18
PUM1-202ENST00000373741 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
PUM1-202ENST00000373741 GGT6Q6P531 493 aa16.17■□□□□ 0.18
PUM1-202ENST00000373741 ANKRD50Q9ULJ7 1429 aa16.17■□□□□ 0.18
PUM1-202ENST00000373741 KIF3BO15066 747 aa16.17■□□□□ 0.18
PUM1-202ENST00000373741 C9orf84Q5VXU9 1444 aa16.16■□□□□ 0.18
PUM1-202ENST00000373741 ABCA8O94911 1581 aa16.14■□□□□ 0.17
PUM1-202ENST00000373741 DCAF11Q8TEB1 546 aa16.14■□□□□ 0.17
PUM1-202ENST00000373741 FAM69CQ0P6D2 419 aa16.12■□□□□ 0.17
PUM1-202ENST00000373741 MAPKBP1O60336 1514 aa16.12■□□□□ 0.17
PUM1-202ENST00000373741 NCOA1Q15788 1441 aa16.11■□□□□ 0.17
PUM1-202ENST00000373741 RSPH4AQ5TD94 716 aa16.11■□□□□ 0.17
PUM1-202ENST00000373741 FKBP8Q14318 412 aa16.11■□□□□ 0.17
PUM1-202ENST00000373741 ABCC2Q92887 1545 aa16.1■□□□□ 0.17
PUM1-202ENST00000373741 RAPGEF3O95398 923 aa16.1■□□□□ 0.17
PUM1-202ENST00000373741 MLECQ14165 292 aa16.1■□□□□ 0.17
PUM1-202ENST00000373741 EIF4G2P78344 907 aaKnown RBP eCLIP16.09■□□□□ 0.176e-9■■■■■ 29.6
PUM1-202ENST00000373741 AKNAQ7Z591 1439 aa16.08■□□□□ 0.16
PUM1-202ENST00000373741 TCOF1Q13428 1488 aaKnown RBP16.08■□□□□ 0.16
PUM1-202ENST00000373741 SCAPERQ9BY12 1400 aa16.07■□□□□ 0.16
PUM1-202ENST00000373741 TRHP20396 242 aaPredicted RBP16.06■□□□□ 0.16
PUM1-202ENST00000373741 ASXL2Q76L83 1435 aa16.06■□□□□ 0.16
PUM1-202ENST00000373741 HSPA5P11021 654 aaKnown RBP16.05■□□□□ 0.16
PUM1-202ENST00000373741 ANP32CO43423 234 aa16.05■□□□□ 0.16
PUM1-202ENST00000373741 TIMELESSQ9UNS1 1208 aa16.05■□□□□ 0.16
PUM1-202ENST00000373741 KDM6BO15054 1643 aa16.05■□□□□ 0.16
PUM1-202ENST00000373741 SYCP2Q9BX26 1530 aa16.04■□□□□ 0.16
PUM1-202ENST00000373741 PRKCSHP14314 528 aaPredicted RBP16.04■□□□□ 0.16
PUM1-202ENST00000373741 ROCK1Q13464 1354 aa16.03■□□□□ 0.16
PUM1-202ENST00000373741 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
PUM1-202ENST00000373741 CARD11Q9BXL7 1154 aa16.02■□□□□ 0.16
PUM1-202ENST00000373741 ITSN2Q9NZM3 1697 aa16.01■□□□□ 0.15
PUM1-202ENST00000373741 ABCC10Q5T3U5 1492 aa16.01■□□□□ 0.15
PUM1-202ENST00000373741 CLASP1Q7Z460 1538 aa16■□□□□ 0.15
PUM1-202ENST00000373741 TRAPPC8Q9Y2L5 1435 aa16■□□□□ 0.15
PUM1-202ENST00000373741 NBPF8Q3BBV2 869 aa15.99■□□□□ 0.15
PUM1-202ENST00000373741 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.99■□□□□ 0.15
PUM1-202ENST00000373741 TTC37Q6PGP7 1564 aa15.98■□□□□ 0.15
PUM1-202ENST00000373741 WDR7Q9Y4E6 1490 aa15.98■□□□□ 0.15
PUM1-202ENST00000373741 CD109Q6YHK3 1445 aa15.98■□□□□ 0.15
PUM1-202ENST00000373741 DNMT1P26358 1616 aaKnown RBP15.98■□□□□ 0.15
PUM1-202ENST00000373741 FANCAO15360 1455 aa15.98■□□□□ 0.15
PUM1-202ENST00000373741 ARID4BQ4LE39 1312 aaPredicted RBP15.98■□□□□ 0.15
PUM1-202ENST00000373741 PLCH2O75038 1416 aa15.98■□□□□ 0.15
PUM1-202ENST00000373741 NUTM2DQ5VT03 806 aaPredicted RBP15.98■□□□□ 0.15
PUM1-202ENST00000373741 PLEKHH2Q8IVE3 1493 aa15.97■□□□□ 0.15
PUM1-202ENST00000373741 SENP3-EIF4A1A0A087X0R7 540 aa15.97■□□□□ 0.15
PUM1-202ENST00000373741 ESF1Q9H501 851 aaKnown RBP15.95■□□□□ 0.14
PUM1-202ENST00000373741 ZCCHC11Q5TAX3 1644 aaKnown RBP15.95■□□□□ 0.14
PUM1-202ENST00000373741 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
PUM1-202ENST00000373741 ADGRL1O94910 1474 aa15.95■□□□□ 0.14
PUM1-202ENST00000373741 ANKRD30BQ9BXX2 1392 aa15.94■□□□□ 0.14
PUM1-202ENST00000373741 WASHC2CQ9Y4E1 1318 aa15.94■□□□□ 0.14
PUM1-202ENST00000373741 CDC42BPAQ5VT25 1732 aa15.94■□□□□ 0.14
PUM1-202ENST00000373741 KANK1Q14678 1352 aa15.94■□□□□ 0.14
PUM1-202ENST00000373741 CCDC144AA2RUR9 1427 aa15.93■□□□□ 0.14
PUM1-202ENST00000373741 RBM19Q9Y4C8 960 aaKnown RBP15.93■□□□□ 0.14
PUM1-202ENST00000373741 KDM5BQ9UGL1 1544 aa15.93■□□□□ 0.14
PUM1-202ENST00000373741 SHROOM2Q13796 1616 aa15.93■□□□□ 0.14
PUM1-202ENST00000373741 KIAA1107Q9UPP5 1409 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms