RNA–Protein interactions for RNA: ENST00000373741.8

PUM1-202, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-202ENST00000373741 NISCHQ9Y2I1 1504 aa24.27■■□□□ 1.48
PUM1-202ENST00000373741 DCAF8L2P0C7V8 631 aa21.58■■□□□ 1.05
PUM1-202ENST00000373741 SHROOM4Q9ULL8 1493 aa21.1■□□□□ 0.97
PUM1-202ENST00000373741 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
PUM1-202ENST00000373741 SUPT5HO00267 1087 aaKnown RBP20.52■□□□□ 0.88
PUM1-202ENST00000373741 ABCC9O60706 1549 aa20.44■□□□□ 0.86
PUM1-202ENST00000373741 ZCCHC6Q5VYS8 1495 aaKnown RBP20.29■□□□□ 0.84
PUM1-202ENST00000373741 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
PUM1-202ENST00000373741 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.74
PUM1-202ENST00000373741 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
PUM1-202ENST00000373741 NACADO15069 1562 aa19.43■□□□□ 0.7
PUM1-202ENST00000373741 RB1CC1Q8TDY2 1594 aa19.38■□□□□ 0.69
PUM1-202ENST00000373741 EHMT2Q96KQ7 1210 aa19.26■□□□□ 0.67
PUM1-202ENST00000373741 MYO15BQ96JP2 1530 aa19.18■□□□□ 0.66
PUM1-202ENST00000373741 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
PUM1-202ENST00000373741 CHIC1Q5VXU3 224 aa19.15■□□□□ 0.66
PUM1-202ENST00000373741 FAM9AQ8IZU1 332 aaPredicted RBP19.13■□□□□ 0.65
PUM1-202ENST00000373741 RSF1Q96T23 1441 aaPredicted RBP19.09■□□□□ 0.65
PUM1-202ENST00000373741 TRIM41Q8WV44 630 aa19■□□□□ 0.63
PUM1-202ENST00000373741 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
PUM1-202ENST00000373741 LOC105371045A0A1W2PR82 267 aa18.83■□□□□ 0.61
PUM1-202ENST00000373741 WIZO95785 1651 aa18.77■□□□□ 0.59
PUM1-202ENST00000373741 BAZ1AQ9NRL2 1556 aaPredicted RBP18.73■□□□□ 0.59
PUM1-202ENST00000373741 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.59
PUM1-202ENST00000373741 BICRAQ9NZM4 1560 aa18.62■□□□□ 0.57
PUM1-202ENST00000373741 SMARCA4P51532 1647 aa18.57■□□□□ 0.56
PUM1-202ENST00000373741 PELP1Q8IZL8 1130 aaKnown RBP18.56■□□□□ 0.56
PUM1-202ENST00000373741 HRCP23327 699 aa18.54■□□□□ 0.56
PUM1-202ENST00000373741 RANGAP1P46060 587 aaPredicted RBP18.51■□□□□ 0.55
PUM1-202ENST00000373741 BAZ1BQ9UIG0 1483 aaKnown RBP18.47■□□□□ 0.55
PUM1-202ENST00000373741 PCGF6Q9BYE7 350 aa18.46■□□□□ 0.55
PUM1-202ENST00000373741 CCDC88BA6NC98 1476 aa18.45■□□□□ 0.54
PUM1-202ENST00000373741 TTBK1Q5TCY1 1321 aaPredicted RBP18.42■□□□□ 0.54
PUM1-202ENST00000373741 ATAD2BQ9ULI0 1458 aa18.38■□□□□ 0.53
PUM1-202ENST00000373741 UBTFP17480 764 aaKnown RBP18.37■□□□□ 0.53
PUM1-202ENST00000373741 PPARGC1BQ86YN6 1023 aaKnown RBP18.37■□□□□ 0.53
PUM1-202ENST00000373741 TOP2AP11388 1531 aaKnown RBP18.36■□□□□ 0.53
PUM1-202ENST00000373741 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
PUM1-202ENST00000373741 EIF4G1Q04637 1599 aaKnown RBP18.27■□□□□ 0.52
PUM1-202ENST00000373741 SMARCA2P51531 1590 aa18.26■□□□□ 0.51
PUM1-202ENST00000373741 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
PUM1-202ENST00000373741 WRNQ14191 1432 aaPredicted RBP eCLIP18.12■□□□□ 0.491e-10■□□□□ 9.9
PUM1-202ENST00000373741 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
PUM1-202ENST00000373741 SOGA1O94964 1423 aa18.07■□□□□ 0.48
PUM1-202ENST00000373741 NCAPD3P42695 1498 aa18.04■□□□□ 0.48
PUM1-202ENST00000373741 CC2D2AQ9P2K1 1620 aa18.03■□□□□ 0.48
PUM1-202ENST00000373741 MYT1Q01538 1121 aa17.98■□□□□ 0.47
PUM1-202ENST00000373741 RUSC2Q8N2Y8 1516 aa17.96■□□□□ 0.47
PUM1-202ENST00000373741 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
PUM1-202ENST00000373741 ATP1B4Q9UN42 357 aaPredicted RBP17.92■□□□□ 0.46
PUM1-202ENST00000373741 APLP2Q06481 763 aa17.91■□□□□ 0.46
PUM1-202ENST00000373741 CADPSQ9ULU8 1353 aa17.89■□□□□ 0.45
PUM1-202ENST00000373741 HMGXB3Q12766 1538 aa17.85■□□□□ 0.45
PUM1-202ENST00000373741 NESP48681 1621 aa17.85■□□□□ 0.45
PUM1-202ENST00000373741 TRIM26Q12899 539 aaPredicted RBP17.82■□□□□ 0.44
PUM1-202ENST00000373741 SYNJ1O43426 1573 aa17.8■□□□□ 0.44
PUM1-202ENST00000373741 P3H3Q8IVL6 736 aa17.77■□□□□ 0.44
PUM1-202ENST00000373741 CFTRP13569 1480 aa17.74■□□□□ 0.43
PUM1-202ENST00000373741 FANCD2Q9BXW9 1451 aa17.71■□□□□ 0.43
PUM1-202ENST00000373741 CEP162Q5TB80 1403 aa17.7■□□□□ 0.42
PUM1-202ENST00000373741 CUX2O14529 1486 aa17.69■□□□□ 0.42
PUM1-202ENST00000373741 FBLN2P98095 1184 aa17.68■□□□□ 0.42
PUM1-202ENST00000373741 EEA1Q15075 1411 aa17.67■□□□□ 0.42
PUM1-202ENST00000373741 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
PUM1-202ENST00000373741 KIF27Q86VH2 1401 aa17.66■□□□□ 0.42
PUM1-202ENST00000373741 GOLGA3Q08378 1498 aa17.66■□□□□ 0.42
PUM1-202ENST00000373741 CUX1P39880 1505 aa17.62■□□□□ 0.41
PUM1-202ENST00000373741 TDRD9Q8NDG6 1382 aaKnown RBP17.62■□□□□ 0.41
PUM1-202ENST00000373741 RAPGEF2Q9Y4G8 1499 aa17.61■□□□□ 0.41
PUM1-202ENST00000373741 CEP164Q9UPV0 1460 aa17.6■□□□□ 0.41
PUM1-202ENST00000373741 TNIKQ9UKE5 1360 aa17.6■□□□□ 0.41
PUM1-202ENST00000373741 ZEB1P37275 1124 aaPredicted RBP17.59■□□□□ 0.41
PUM1-202ENST00000373741 HNRNPUL2Q1KMD3 747 aaKnown RBP17.59■□□□□ 0.41
PUM1-202ENST00000373741 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
PUM1-202ENST00000373741 CLIP1P30622 1438 aa17.59■□□□□ 0.41
PUM1-202ENST00000373741 RAD54L2Q9Y4B4 1467 aa17.58■□□□□ 0.41
PUM1-202ENST00000373741 ERCC6Q03468 1493 aa17.58■□□□□ 0.4
PUM1-202ENST00000373741 FGD5Q6ZNL6 1462 aa17.57■□□□□ 0.4
PUM1-202ENST00000373741 ITGAEP38570 1179 aa17.57■□□□□ 0.4
PUM1-202ENST00000373741 ARID3CA6NKF2 412 aa17.55■□□□□ 0.4
PUM1-202ENST00000373741 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
PUM1-202ENST00000373741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.52■□□□□ 0.39
PUM1-202ENST00000373741 CCER1Q8TC90 406 aaPredicted RBP17.52■□□□□ 0.39
PUM1-202ENST00000373741 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
PUM1-202ENST00000373741 CENPBP07199 599 aaPredicted RBP17.48■□□□□ 0.39
PUM1-202ENST00000373741 IGF1RP08069 1367 aa17.43■□□□□ 0.38
PUM1-202ENST00000373741 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
PUM1-202ENST00000373741 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
PUM1-202ENST00000373741 GTF3C3Q9Y5Q9 886 aa17.37■□□□□ 0.37
PUM1-202ENST00000373741 CHMP7Q8WUX9 453 aaPredicted RBP17.35■□□□□ 0.37
PUM1-202ENST00000373741 LAMC3Q9Y6N6 1575 aa17.34■□□□□ 0.37
PUM1-202ENST00000373741 URB2Q14146 1524 aaKnown RBP17.34■□□□□ 0.37
PUM1-202ENST00000373741 BIVM-ERCC5R4GMW8 1640 aa17.33■□□□□ 0.37
PUM1-202ENST00000373741 AQRO60306 1485 aaKnown RBP eCLIP17.33■□□□□ 0.377e-7■■■■■ 33.4
PUM1-202ENST00000373741 ACIN1Q9UKV3 1341 aaKnown RBP17.3■□□□□ 0.36
PUM1-202ENST00000373741 FAM50AQ14320 339 aaKnown RBP17.3■□□□□ 0.36
PUM1-202ENST00000373741 DNMBPQ6XZF7 1577 aa17.29■□□□□ 0.36
PUM1-202ENST00000373741 KANK4Q5T7N3 995 aaPredicted RBP17.28■□□□□ 0.36
PUM1-202ENST00000373741 PRXQ9BXM0 1461 aa17.27■□□□□ 0.36
PUM1-202ENST00000373741 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms