RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 GPATCH8Q9UKJ3 1502 aaKnown RBP29.54■■■□□ 2.32
COL16A1-201ENST00000373667 CDC42BPAQ5VT25 1732 aa29.54■■■□□ 2.32
COL16A1-201ENST00000373667 AKNAQ7Z591 1439 aa29.54■■■□□ 2.32
COL16A1-201ENST00000373667 PHLDB1Q86UU1 1377 aa29.53■■■□□ 2.32
COL16A1-201ENST00000373667 CFDP1Q9UEE9 299 aaPredicted RBP29.53■■■□□ 2.32
COL16A1-201ENST00000373667 CDC42BPBQ9Y5S2 1711 aa29.52■■■□□ 2.32
COL16A1-201ENST00000373667 PREX2Q70Z35 1606 aa29.51■■■□□ 2.31
COL16A1-201ENST00000373667 CFAP74Q9C0B2 1584 aa29.51■■■□□ 2.31
COL16A1-201ENST00000373667 ARAP3Q8WWN8 1544 aa29.5■■■□□ 2.31
COL16A1-201ENST00000373667 COL17A1Q9UMD9 1497 aaPredicted RBP29.48■■■□□ 2.31
COL16A1-201ENST00000373667 RAPGEF3O95398 923 aa29.44■■■□□ 2.3
COL16A1-201ENST00000373667 SCAPERQ9BY12 1400 aa29.44■■■□□ 2.3
COL16A1-201ENST00000373667 ADGRL1O94910 1474 aa29.43■■■□□ 2.3
COL16A1-201ENST00000373667 ITSN2Q9NZM3 1697 aa29.43■■■□□ 2.3
COL16A1-201ENST00000373667 DENND4BO75064 1496 aaPredicted RBP29.4■■■□□ 2.3
COL16A1-201ENST00000373667 ZNF644Q9H582 1327 aaPredicted RBP29.38■■■□□ 2.29
COL16A1-201ENST00000373667 MYOM3Q5VTT5 1437 aa29.37■■■□□ 2.29
COL16A1-201ENST00000373667 HNRNPMP52272 730 aaKnown RBP eCLIP29.36■■■□□ 2.29
COL16A1-201ENST00000373667 SAMD9LQ8IVG5 1584 aa29.35■■■□□ 2.29
COL16A1-201ENST00000373667 AFAP1Q8N556 730 aa29.31■■■□□ 2.28
COL16A1-201ENST00000373667 ABCC1P33527 1531 aa29.3■■■□□ 2.28
COL16A1-201ENST00000373667 MYT1LQ9UL68 1186 aa29.3■■■□□ 2.28
COL16A1-201ENST00000373667 PLEKHH2Q8IVE3 1493 aa29.29■■■□□ 2.28
COL16A1-201ENST00000373667 ARHGEF12Q9NZN5 1544 aa29.29■■■□□ 2.28
COL16A1-201ENST00000373667 MIA2Q96PC5 1412 aa29.28■■■□□ 2.28
COL16A1-201ENST00000373667 POGZQ7Z3K3 1410 aa29.28■■■□□ 2.28
COL16A1-201ENST00000373667 SYCP2Q9BX26 1530 aa29.27■■■□□ 2.28
COL16A1-201ENST00000373667 RICTORQ6R327 1708 aa29.27■■■□□ 2.28
COL16A1-201ENST00000373667 CAMSAP2Q08AD1 1489 aa29.26■■■□□ 2.27
COL16A1-201ENST00000373667 TRAPPC8Q9Y2L5 1435 aa29.26■■■□□ 2.27
COL16A1-201ENST00000373667 KIAA1107Q9UPP5 1409 aa29.25■■■□□ 2.27
COL16A1-201ENST00000373667 FRMPD1Q5SYB0 1578 aa29.25■■■□□ 2.27
COL16A1-201ENST00000373667 ZNF518AQ6AHZ1 1483 aa29.23■■■□□ 2.27
COL16A1-201ENST00000373667 FGD6Q6ZV73 1430 aa29.23■■■□□ 2.27
COL16A1-201ENST00000373667 FAM50AQ14320 339 aaKnown RBP29.19■■■□□ 2.26
COL16A1-201ENST00000373667 PTPN23Q9H3S7 1636 aa29.19■■■□□ 2.26
COL16A1-201ENST00000373667 RSPH4AQ5TD94 716 aa29.17■■■□□ 2.26
COL16A1-201ENST00000373667 SPAG9O60271 1321 aaKnown RBP29.17■■■□□ 2.26
COL16A1-201ENST00000373667 MBD5Q9P267 1494 aa29.17■■■□□ 2.26
COL16A1-201ENST00000373667 ZMYM4Q5VZL5 1548 aa29.14■■■□□ 2.25
COL16A1-201ENST00000373667 TSPY4P0CV99 314 aa29.13■■■□□ 2.25
COL16A1-201ENST00000373667 TSPY10P0CW01 314 aa29.13■■■□□ 2.25
COL16A1-201ENST00000373667 MAGI2Q86UL8 1455 aa29.12■■■□□ 2.25
COL16A1-201ENST00000373667 KDM5CP41229 1560 aa29.12■■■□□ 2.25
COL16A1-201ENST00000373667 YEATS2Q9ULM3 1422 aa29.11■■■□□ 2.25
COL16A1-201ENST00000373667 TCOF1Q13428 1488 aaKnown RBP29.1■■■□□ 2.25
COL16A1-201ENST00000373667 ZFYVE16Q7Z3T8 1539 aa29.1■■■□□ 2.25
COL16A1-201ENST00000373667 CCDC141Q6ZP82 1450 aa29.1■■■□□ 2.25
COL16A1-201ENST00000373667 MLH3Q9UHC1 1453 aa29.08■■■□□ 2.25
COL16A1-201ENST00000373667 ARHGEF5Q12774 1597 aa29.08■■■□□ 2.25
COL16A1-201ENST00000373667 HECW2Q9P2P5 1572 aa29.08■■■□□ 2.25
COL16A1-201ENST00000373667 ARID4BQ4LE39 1312 aaPredicted RBP29.03■■■□□ 2.24
COL16A1-201ENST00000373667 ARHGEF40Q8TER5 1519 aa29.03■■■□□ 2.24
COL16A1-201ENST00000373667 KIDINS220Q9ULH0 1771 aa29.02■■■□□ 2.24
COL16A1-201ENST00000373667 ATP7AQ04656 1500 aa29.01■■■□□ 2.23
COL16A1-201ENST00000373667 ATP10AO60312 1499 aa29.01■■■□□ 2.23
COL16A1-201ENST00000373667 ITGAEP38570 1179 aa29■■■□□ 2.23
COL16A1-201ENST00000373667 ABCC5O15440 1437 aa29■■■□□ 2.23
COL16A1-201ENST00000373667 CHIC2Q9UKJ5 165 aa28.99■■■□□ 2.23
COL16A1-201ENST00000373667 RTEL1-TNFRSF6BF6WH68 1400 aa28.98■■■□□ 2.23
COL16A1-201ENST00000373667 DAPK1P53355 1430 aa28.98■■■□□ 2.23
COL16A1-201ENST00000373667 DNMT1P26358 1616 aaKnown RBP28.97■■■□□ 2.23
COL16A1-201ENST00000373667 ABCA6Q8N139 1617 aa28.97■■■□□ 2.23
COL16A1-201ENST00000373667 INO80Q9ULG1 1556 aaPredicted RBP28.96■■■□□ 2.23
COL16A1-201ENST00000373667 DIP2CQ9Y2E4 1556 aa28.96■■■□□ 2.23
COL16A1-201ENST00000373667 C9orf84Q5VXU9 1444 aa28.95■■■□□ 2.23
COL16A1-201ENST00000373667 RRBP1Q9P2E9 1410 aaKnown RBP28.94■■■□□ 2.22
COL16A1-201ENST00000373667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.92■■■□□ 2.22
COL16A1-201ENST00000373667 MAST1Q9Y2H9 1570 aa28.9■■■□□ 2.22
COL16A1-201ENST00000373667 CROCC2H7BZ55 1655 aa28.89■■■□□ 2.22
COL16A1-201ENST00000373667 MLECQ14165 292 aa28.89■■■□□ 2.22
COL16A1-201ENST00000373667 RRP7BPQ9NSQ0 103 aa28.89■■■□□ 2.22
COL16A1-201ENST00000373667 A2MP01023 1474 aa28.87■■■□□ 2.21
COL16A1-201ENST00000373667 SHANK2Q9UPX8 1470 aa28.87■■■□□ 2.21
COL16A1-201ENST00000373667 ADGBQ8N7X0 1667 aa28.85■■■□□ 2.21
COL16A1-201ENST00000373667 ANKRD30AQ9BXX3 1397 aa28.84■■■□□ 2.21
COL16A1-201ENST00000373667 SIGLEC1Q9BZZ2 1709 aa28.83■■■□□ 2.21
COL16A1-201ENST00000373667 DHX29Q7Z478 1369 aaKnown RBP28.83■■■□□ 2.21
COL16A1-201ENST00000373667 PTPRKQ15262 1439 aa28.83■■■□□ 2.21
COL16A1-201ENST00000373667 REREQ9P2R6 1566 aa28.82■■■□□ 2.2
COL16A1-201ENST00000373667 KIF15Q9NS87 1388 aa28.8■■■□□ 2.2
COL16A1-201ENST00000373667 PLXNC1O60486 1568 aa28.79■■■□□ 2.2
COL16A1-201ENST00000373667 KDM4FA0A1W2PPD8 638 aa28.78■■■□□ 2.2
COL16A1-201ENST00000373667 NCOA1Q15788 1441 aa28.77■■■□□ 2.2
COL16A1-201ENST00000373667 KIF3BO15066 747 aa28.77■■■□□ 2.2
COL16A1-201ENST00000373667 AGLP35573 1532 aa28.76■■■□□ 2.19
COL16A1-201ENST00000373667 GGT6Q6P531 493 aa28.75■■■□□ 2.19
COL16A1-201ENST00000373667 BCORL1Q5H9F3 1711 aa28.74■■■□□ 2.19
COL16A1-201ENST00000373667 ADGRL2O95490 1459 aa28.74■■■□□ 2.19
COL16A1-201ENST00000373667 DUOX2Q9NRD8 1548 aa28.74■■■□□ 2.19
COL16A1-201ENST00000373667 ESF1Q9H501 851 aaKnown RBP28.7■■■□□ 2.18
COL16A1-201ENST00000373667 ROCK1Q13464 1354 aa28.7■■■□□ 2.18
COL16A1-201ENST00000373667 ADAMTSL3P82987 1691 aa28.66■■■□□ 2.18
COL16A1-201ENST00000373667 ERBINQ96RT1 1412 aa28.63■■■□□ 2.17
COL16A1-201ENST00000373667 MADDQ8WXG6 1647 aa28.62■■■□□ 2.17
COL16A1-201ENST00000373667 PLPPR3Q6T4P5 718 aa28.62■■■□□ 2.17
COL16A1-201ENST00000373667 ANKRD50Q9ULJ7 1429 aa28.61■■■□□ 2.17
COL16A1-201ENST00000373667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.61■■■□□ 2.17
COL16A1-201ENST00000373667 EIF2AK4Q9P2K8 1649 aaKnown RBP28.59■■■□□ 2.17
COL16A1-201ENST00000373667 FER1L4A9Z1Z3 1794 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms