RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 NISCHQ9Y2I1 1504 aa45.27■■■■■ 4.84
COL16A1-201ENST00000373667 CCDC180Q9P1Z9 1646 aa40.03■■■■■ 4
COL16A1-201ENST00000373667 ABCC9O60706 1549 aa39■■■■□ 3.83
COL16A1-201ENST00000373667 DCAF8L2P0C7V8 631 aa37.97■■■■□ 3.67
COL16A1-201ENST00000373667 ZCCHC6Q5VYS8 1495 aaKnown RBP37.74■■■■□ 3.63
COL16A1-201ENST00000373667 NACADO15069 1562 aa37.59■■■■□ 3.61
COL16A1-201ENST00000373667 RB1CC1Q8TDY2 1594 aa37.59■■■■□ 3.61
COL16A1-201ENST00000373667 MYO15BQ96JP2 1530 aa37.4■■■■□ 3.58
COL16A1-201ENST00000373667 DCAF1Q9Y4B6 1507 aa37.4■■■■□ 3.58
COL16A1-201ENST00000373667 UNC13AQ9UPW8 1703 aa36.71■■■■□ 3.47
COL16A1-201ENST00000373667 SCRIBQ14160 1630 aa36.67■■■■□ 3.46
COL16A1-201ENST00000373667 PABPN1Q86U42 306 aaKnown RBP eCLIP36.58■■■■□ 3.45
COL16A1-201ENST00000373667 BICRAQ9NZM4 1560 aa36.4■■■■□ 3.42
COL16A1-201ENST00000373667 SHROOM4Q9ULL8 1493 aa36.16■■■■□ 3.38
COL16A1-201ENST00000373667 DNAJC5BQ9UF47 199 aa35.5■■■■□ 3.27
COL16A1-201ENST00000373667 EIF4G1Q04637 1599 aaKnown RBP35.43■■■■□ 3.26
COL16A1-201ENST00000373667 CECR2Q9BXF3 1484 aa35.28■■■■□ 3.24
COL16A1-201ENST00000373667 CC2D2AQ9P2K1 1620 aa35.23■■■■□ 3.23
COL16A1-201ENST00000373667 BAZ1AQ9NRL2 1556 aaPredicted RBP35.06■■■■□ 3.2
COL16A1-201ENST00000373667 SMARCA4P51532 1647 aa35.05■■■■□ 3.2
COL16A1-201ENST00000373667 MROH2BQ7Z745 1585 aa34.92■■■■□ 3.18
COL16A1-201ENST00000373667 ATAD2BQ9ULI0 1458 aa34.78■■■■□ 3.16
COL16A1-201ENST00000373667 SMARCA2P51531 1590 aa34.74■■■■□ 3.15
COL16A1-201ENST00000373667 NCAPD3P42695 1498 aa34.69■■■■□ 3.14
COL16A1-201ENST00000373667 RSF1Q96T23 1441 aaPredicted RBP34.65■■■■□ 3.14
COL16A1-201ENST00000373667 PEG3Q9GZU2 1588 aa34.62■■■■□ 3.13
COL16A1-201ENST00000373667 WIZO95785 1651 aa34.59■■■■□ 3.13
COL16A1-201ENST00000373667 BAZ1BQ9UIG0 1483 aaKnown RBP34.55■■■■□ 3.12
COL16A1-201ENST00000373667 HMGXB3Q12766 1538 aa34.51■■■■□ 3.12
COL16A1-201ENST00000373667 SUPT5HO00267 1087 aaKnown RBP34.24■■■■□ 3.07
COL16A1-201ENST00000373667 TOP2AP11388 1531 aaKnown RBP34.18■■■■□ 3.06
COL16A1-201ENST00000373667 CCDC88BA6NC98 1476 aa33.84■■■■□ 3.01
COL16A1-201ENST00000373667 NESP48681 1621 aa33.83■■■■□ 3.01
COL16A1-201ENST00000373667 CADPSQ9ULU8 1353 aa33.75■■■□□ 2.99
COL16A1-201ENST00000373667 LAMC3Q9Y6N6 1575 aa33.72■■■□□ 2.99
COL16A1-201ENST00000373667 ERCC6Q03468 1493 aa33.6■■■□□ 2.97
COL16A1-201ENST00000373667 CFTRP13569 1480 aa33.57■■■□□ 2.97
COL16A1-201ENST00000373667 PDS5BQ9NTI5 1447 aa33.54■■■□□ 2.96
COL16A1-201ENST00000373667 KIF21AQ7Z4S6 1674 aa33.4■■■□□ 2.94
COL16A1-201ENST00000373667 FANCD2Q9BXW9 1451 aa33.37■■■□□ 2.93
COL16A1-201ENST00000373667 PRDM2Q13029 1718 aa33.31■■■□□ 2.92
COL16A1-201ENST00000373667 CEP164Q9UPV0 1460 aa33.29■■■□□ 2.92
COL16A1-201ENST00000373667 MRC2Q9UBG0 1479 aa33.15■■■□□ 2.9
COL16A1-201ENST00000373667 THOC2Q8NI27 1593 aaKnown RBP33.14■■■□□ 2.9
COL16A1-201ENST00000373667 CUX2O14529 1486 aa33.01■■■□□ 2.88
COL16A1-201ENST00000373667 URB2Q14146 1524 aaKnown RBP32.99■■■□□ 2.87
COL16A1-201ENST00000373667 WDR62O43379 1518 aa32.97■■■□□ 2.87
COL16A1-201ENST00000373667 ABCC8Q09428 1581 aa32.87■■■□□ 2.85
COL16A1-201ENST00000373667 TOPBP1Q92547 1522 aa32.85■■■□□ 2.85
COL16A1-201ENST00000373667 DNMBPQ6XZF7 1577 aa32.83■■■□□ 2.85
COL16A1-201ENST00000373667 CUX1P39880 1505 aa32.73■■■□□ 2.83
COL16A1-201ENST00000373667 WRNQ14191 1432 aaPredicted RBP eCLIP32.68■■■□□ 2.82
COL16A1-201ENST00000373667 POLA1P09884 1462 aaPredicted RBP32.59■■■□□ 2.81
COL16A1-201ENST00000373667 FGD5Q6ZNL6 1462 aa32.59■■■□□ 2.81
COL16A1-201ENST00000373667 IFT140Q96RY7 1462 aa32.56■■■□□ 2.8
COL16A1-201ENST00000373667 SYNJ1O43426 1573 aa32.55■■■□□ 2.8
COL16A1-201ENST00000373667 SOGA1O94964 1423 aa32.53■■■□□ 2.8
COL16A1-201ENST00000373667 TOP2BQ02880 1626 aa32.52■■■□□ 2.8
COL16A1-201ENST00000373667 RAD54L2Q9Y4B4 1467 aa32.5■■■□□ 2.79
COL16A1-201ENST00000373667 BIVM-ERCC5R4GMW8 1640 aa32.5■■■□□ 2.79
COL16A1-201ENST00000373667 TARBP1Q13395 1621 aaKnown RBP32.44■■■□□ 2.78
COL16A1-201ENST00000373667 ZNF608Q9ULD9 1512 aaPredicted RBP32.41■■■□□ 2.78
COL16A1-201ENST00000373667 TDRD9Q8NDG6 1382 aaKnown RBP32.33■■■□□ 2.77
COL16A1-201ENST00000373667 AQRO60306 1485 aaKnown RBP eCLIP32.31■■■□□ 2.76
COL16A1-201ENST00000373667 TRIM41Q8WV44 630 aa32.28■■■□□ 2.76
COL16A1-201ENST00000373667 EIF4G3O43432 1585 aaKnown RBP32.25■■■□□ 2.75
COL16A1-201ENST00000373667 ABCA10Q8WWZ4 1543 aa32.25■■■□□ 2.75
COL16A1-201ENST00000373667 WDR97A6NE52 1622 aa32.21■■■□□ 2.75
COL16A1-201ENST00000373667 GAPVD1Q14C86 1478 aa32.13■■■□□ 2.73
COL16A1-201ENST00000373667 CHIC1Q5VXU3 224 aa32.08■■■□□ 2.73
COL16A1-201ENST00000373667 GRIN2BQ13224 1484 aa32.07■■■□□ 2.72
COL16A1-201ENST00000373667 ABCA5Q8WWZ7 1642 aa32.06■■■□□ 2.72
COL16A1-201ENST00000373667 PBRM1Q86U86 1689 aa32■■■□□ 2.71
COL16A1-201ENST00000373667 FBLN2P98095 1184 aa31.99■■■□□ 2.71
COL16A1-201ENST00000373667 SNAPC4Q5SXM2 1469 aa31.98■■■□□ 2.71
COL16A1-201ENST00000373667 KIF27Q86VH2 1401 aa31.98■■■□□ 2.71
COL16A1-201ENST00000373667 MAGI1Q96QZ7 1491 aaPredicted RBP31.91■■■□□ 2.7
COL16A1-201ENST00000373667 CHMP7Q8WUX9 453 aaPredicted RBP31.9■■■□□ 2.7
COL16A1-201ENST00000373667 ERICH3Q5RHP9 1530 aa31.87■■■□□ 2.69
COL16A1-201ENST00000373667 OSCARQ8IYS5 282 aa31.85■■■□□ 2.69
COL16A1-201ENST00000373667 RUSC2Q8N2Y8 1516 aa31.83■■■□□ 2.69
COL16A1-201ENST00000373667 IGF1RP08069 1367 aa31.81■■■□□ 2.68
COL16A1-201ENST00000373667 CHD1O14646 1710 aa31.81■■■□□ 2.68
COL16A1-201ENST00000373667 SYNJ2O15056 1496 aa31.8■■■□□ 2.68
COL16A1-201ENST00000373667 FHAD1B1AJZ9 1412 aa31.76■■■□□ 2.68
COL16A1-201ENST00000373667 ADAMTS12P58397 1594 aa31.74■■■□□ 2.67
COL16A1-201ENST00000373667 DNAJC5Q9H3Z4 198 aa31.69■■■□□ 2.66
COL16A1-201ENST00000373667 FAM9AQ8IZU1 332 aaPredicted RBP31.68■■■□□ 2.66
COL16A1-201ENST00000373667 CARMIL1Q5VZK9 1371 aa31.67■■■□□ 2.66
COL16A1-201ENST00000373667 CUL7Q14999 1698 aa31.65■■■□□ 2.66
COL16A1-201ENST00000373667 GRIN2AQ12879 1464 aa31.64■■■□□ 2.66
COL16A1-201ENST00000373667 CSRNP3Q8WYN3 585 aa31.59■■■□□ 2.65
COL16A1-201ENST00000373667 EEA1Q15075 1411 aa31.57■■■□□ 2.64
COL16A1-201ENST00000373667 RAPGEF2Q9Y4G8 1499 aa31.48■■■□□ 2.63
COL16A1-201ENST00000373667 NUP160Q12769 1436 aa31.45■■■□□ 2.63
COL16A1-201ENST00000373667 CEP170Q5SW79 1584 aa31.45■■■□□ 2.63
COL16A1-201ENST00000373667 CLASP1Q7Z460 1538 aa31.42■■■□□ 2.62
COL16A1-201ENST00000373667 PRXQ9BXM0 1461 aa31.4■■■□□ 2.62
COL16A1-201ENST00000373667 EHMT2Q96KQ7 1210 aa31.3■■■□□ 2.6
COL16A1-201ENST00000373667 KIAA0586Q9BVV6 1533 aa31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms