RNA–Protein interactions for RNA: ENST00000372595.5

SCMH1-205, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SCMH1, Length 3,231 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-205ENST00000372595 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
SCMH1-205ENST00000372595 IFT140Q96RY7 1462 aa12.42□□□□□ -0.42
SCMH1-205ENST00000372595 ADAMTS12P58397 1594 aa12.42□□□□□ -0.42
SCMH1-205ENST00000372595 HNRNPUQ00839 825 aaKnown RBP eCLIP12.4□□□□□ -0.42
SCMH1-205ENST00000372595 MIA2Q96PC5 1412 aa12.39□□□□□ -0.43
SCMH1-205ENST00000372595 KIAA0586Q9BVV6 1533 aa12.39□□□□□ -0.43
SCMH1-205ENST00000372595 JPH4Q96JJ6 628 aa12.38□□□□□ -0.43
SCMH1-205ENST00000372595 SALL2Q9Y467 1007 aaPredicted RBP12.38□□□□□ -0.43
SCMH1-205ENST00000372595 PRG4Q92954 1404 aaPredicted RBP12.37□□□□□ -0.43
SCMH1-205ENST00000372595 WDR62O43379 1518 aa12.37□□□□□ -0.43
SCMH1-205ENST00000372595 WASHC2AQ641Q2 1341 aa12.37□□□□□ -0.43
SCMH1-205ENST00000372595 TCOF1Q13428 1488 aaKnown RBP12.37□□□□□ -0.43
SCMH1-205ENST00000372595 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
SCMH1-205ENST00000372595 KDM6BO15054 1643 aa12.36□□□□□ -0.43
SCMH1-205ENST00000372595 PLEKHD1A6NEE1 506 aa12.35□□□□□ -0.43
SCMH1-205ENST00000372595 DAPK1P53355 1430 aa12.35□□□□□ -0.43
SCMH1-205ENST00000372595 GRIN2AQ12879 1464 aa12.35□□□□□ -0.43
SCMH1-205ENST00000372595 NBPF8Q3BBV2 869 aa12.35□□□□□ -0.43
SCMH1-205ENST00000372595 DISP1Q96F81 1524 aa12.35□□□□□ -0.43
SCMH1-205ENST00000372595 ABCC5O15440 1437 aa12.35□□□□□ -0.43
SCMH1-205ENST00000372595 FAM9BQ8IZU0 186 aa12.34□□□□□ -0.43
SCMH1-205ENST00000372595 NUP153P49790 1475 aaKnown RBP12.34□□□□□ -0.43
SCMH1-205ENST00000372595 UBE2Q2Q8WVN8 375 aa12.33□□□□□ -0.43
SCMH1-205ENST00000372595 DEKP35659 375 aaKnown RBP12.33□□□□□ -0.44
SCMH1-205ENST00000372595 PLB1Q6P1J6 1458 aa12.33□□□□□ -0.44
SCMH1-205ENST00000372595 C11orf95C9JLR9 678 aaPredicted RBP12.33□□□□□ -0.44
SCMH1-205ENST00000372595 IRX6P78412 446 aaPredicted RBP12.32□□□□□ -0.44
SCMH1-205ENST00000372595 PKD2Q13563 968 aa12.32□□□□□ -0.44
SCMH1-205ENST00000372595 KIAA0556O60303 1618 aa12.31□□□□□ -0.44
SCMH1-205ENST00000372595 CARMIL2Q6F5E8 1435 aa12.31□□□□□ -0.44
SCMH1-205ENST00000372595 DENND4BO75064 1496 aaPredicted RBP12.31□□□□□ -0.44
SCMH1-205ENST00000372595 AKNAQ7Z591 1439 aa12.3□□□□□ -0.44
SCMH1-205ENST00000372595 TROQ12816 1431 aaPredicted RBP12.3□□□□□ -0.44
SCMH1-205ENST00000372595 ANKRD30BQ9BXX2 1392 aa12.3□□□□□ -0.44
SCMH1-205ENST00000372595 MRS2Q9HD23 443 aa12.3□□□□□ -0.44
SCMH1-205ENST00000372595 FANCIQ9NVI1 1328 aa12.29□□□□□ -0.44
SCMH1-205ENST00000372595 TSPY4P0CV99 314 aa12.29□□□□□ -0.44
SCMH1-205ENST00000372595 TSPY10P0CW01 314 aa12.29□□□□□ -0.44
SCMH1-205ENST00000372595 CCDC184Q52MB2 194 aa12.29□□□□□ -0.44
SCMH1-205ENST00000372595 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
SCMH1-205ENST00000372595 ROCK1Q13464 1354 aa12.28□□□□□ -0.44
SCMH1-205ENST00000372595 EIF4G3O43432 1585 aaKnown RBP12.28□□□□□ -0.44
SCMH1-205ENST00000372595 RAPGEF6Q8TEU7 1601 aa12.28□□□□□ -0.44
SCMH1-205ENST00000372595 CCDC136Q96JN2 1154 aa12.28□□□□□ -0.44
SCMH1-205ENST00000372595 KDM5BQ9UGL1 1544 aa12.27□□□□□ -0.45
SCMH1-205ENST00000372595 GCC2Q8IWJ2 1684 aa12.27□□□□□ -0.45
SCMH1-205ENST00000372595 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.452e-6■■□□□ 13.9
SCMH1-205ENST00000372595 CCDC7Q96M83 1385 aa12.26□□□□□ -0.45
SCMH1-205ENST00000372595 ANKRD30AQ9BXX3 1397 aa12.26□□□□□ -0.45
SCMH1-205ENST00000372595 SYNJ2O15056 1496 aa12.25□□□□□ -0.45
SCMH1-205ENST00000372595 MYT1LQ9UL68 1186 aa12.25□□□□□ -0.45
SCMH1-205ENST00000372595 CAMSAP2Q08AD1 1489 aa12.25□□□□□ -0.45
SCMH1-205ENST00000372595 SENP3-EIF4A1A0A087X0R7 540 aa12.25□□□□□ -0.45
SCMH1-205ENST00000372595 PRKRIP1Q9H875 184 aaPredicted RBP12.25□□□□□ -0.45
SCMH1-205ENST00000372595 MAGI1Q96QZ7 1491 aaPredicted RBP12.24□□□□□ -0.45
SCMH1-205ENST00000372595 NUP155O75694 1391 aa12.24□□□□□ -0.45
SCMH1-205ENST00000372595 GPATCH8Q9UKJ3 1502 aaKnown RBP12.24□□□□□ -0.45
SCMH1-205ENST00000372595 NCOA1Q15788 1441 aa12.24□□□□□ -0.45
SCMH1-205ENST00000372595 KIF7Q2M1P5 1343 aa12.23□□□□□ -0.45
SCMH1-205ENST00000372595 RPRD2Q5VT52 1461 aaKnown RBP12.23□□□□□ -0.45
SCMH1-205ENST00000372595 CNTLNQ9NXG0 1405 aa12.23□□□□□ -0.45
SCMH1-205ENST00000372595 ERICH6BQ5W0A0 696 aa12.23□□□□□ -0.45
SCMH1-205ENST00000372595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.22□□□□□ -0.453e-7■□□□□ 11
SCMH1-205ENST00000372595 CEP170Q5SW79 1584 aa12.22□□□□□ -0.45
SCMH1-205ENST00000372595 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
SCMH1-205ENST00000372595 ANKRD50Q9ULJ7 1429 aa12.21□□□□□ -0.46
SCMH1-205ENST00000372595 CARD11Q9BXL7 1154 aa12.2□□□□□ -0.46
SCMH1-205ENST00000372595 KIF14Q15058 1648 aa12.19□□□□□ -0.46
SCMH1-205ENST00000372595 PTPRGP23470 1445 aa12.19□□□□□ -0.46
SCMH1-205ENST00000372595 RGL3Q3MIN7 710 aa12.19□□□□□ -0.46
SCMH1-205ENST00000372595 DCAF11Q8TEB1 546 aa12.19□□□□□ -0.46
SCMH1-205ENST00000372595 KIAA1107Q9UPP5 1409 aa12.18□□□□□ -0.46
SCMH1-205ENST00000372595 PZPP20742 1482 aa12.18□□□□□ -0.46
SCMH1-205ENST00000372595 USP47Q96K76 1375 aa12.17□□□□□ -0.46
SCMH1-205ENST00000372595 ATP10BO94823 1461 aa12.17□□□□□ -0.46
SCMH1-205ENST00000372595 TEX14Q8IWB6 1497 aa12.17□□□□□ -0.46
SCMH1-205ENST00000372595 NUP160Q12769 1436 aa12.16□□□□□ -0.46
SCMH1-205ENST00000372595 C9orf84Q5VXU9 1444 aa12.15□□□□□ -0.46
SCMH1-205ENST00000372595 KIF15Q9NS87 1388 aa12.15□□□□□ -0.47
SCMH1-205ENST00000372595 ST20-MTHFSA0A0A6YYL1 179 aa12.13□□□□□ -0.47
SCMH1-205ENST00000372595 ITSN2Q9NZM3 1697 aa12.12□□□□□ -0.47
SCMH1-205ENST00000372595 TMC1Q8TDI8 760 aa12.12□□□□□ -0.47
SCMH1-205ENST00000372595 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.12□□□□□ -0.47
SCMH1-205ENST00000372595 IL27Q8NEV9 243 aa12.11□□□□□ -0.47
SCMH1-205ENST00000372595 SPATA31E1Q6ZUB1 1445 aa12.1□□□□□ -0.47
SCMH1-205ENST00000372595 ADGRL2O95490 1459 aa12.09□□□□□ -0.47
SCMH1-205ENST00000372595 B4GALNT3Q6L9W6 998 aa12.09□□□□□ -0.47
SCMH1-205ENST00000372595 ZBED9Q6R2W3 1325 aa12.08□□□□□ -0.48
SCMH1-205ENST00000372595 ABCC10Q5T3U5 1492 aa12.07□□□□□ -0.48
SCMH1-205ENST00000372595 ROCK2O75116 1388 aaKnown RBP12.07□□□□□ -0.48
SCMH1-205ENST00000372595 PPP4R2Q9NY27 417 aa12.07□□□□□ -0.48
SCMH1-205ENST00000372595 ABCA8O94911 1581 aa12.07□□□□□ -0.48
SCMH1-205ENST00000372595 RSPH4AQ5TD94 716 aa12.06□□□□□ -0.48
SCMH1-205ENST00000372595 ADGBQ8N7X0 1667 aa12.05□□□□□ -0.48
SCMH1-205ENST00000372595 NBPF1Q3BBV0 1214 aa12.05□□□□□ -0.48
SCMH1-205ENST00000372595 CDC42BPAQ5VT25 1732 aa12.04□□□□□ -0.48
SCMH1-205ENST00000372595 ADCY10Q96PN6 1610 aa12.03□□□□□ -0.48
SCMH1-205ENST00000372595 CCDC144AA2RUR9 1427 aa12.03□□□□□ -0.48
SCMH1-205ENST00000372595 DHX29Q7Z478 1369 aaKnown RBP12.03□□□□□ -0.48
SCMH1-205ENST00000372595 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms