RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 ARAP3Q8WWN8 1544 aa22.8■■□□□ 1.24
YIPF3-202ENST00000372422 DIP2BQ9P265 1576 aa22.79■■□□□ 1.24
YIPF3-202ENST00000372422 TCOF1Q13428 1488 aaKnown RBP22.79■■□□□ 1.24
YIPF3-202ENST00000372422 FAM69CQ0P6D2 419 aa22.78■■□□□ 1.24
YIPF3-202ENST00000372422 CD109Q6YHK3 1445 aa22.78■■□□□ 1.24
YIPF3-202ENST00000372422 PCGF6Q9BYE7 350 aa22.77■■□□□ 1.24
YIPF3-202ENST00000372422 ZNF777Q9ULD5 760 aaPredicted RBP22.77■■□□□ 1.24
YIPF3-202ENST00000372422 EFCAB2Q5VUJ9 269 aa22.76■■□□□ 1.23
YIPF3-202ENST00000372422 CDC42BPBQ9Y5S2 1711 aa22.76■■□□□ 1.23
YIPF3-202ENST00000372422 CAMSAP2Q08AD1 1489 aa22.74■■□□□ 1.23
YIPF3-202ENST00000372422 MAP3K4Q9Y6R4 1608 aa22.72■■□□□ 1.23
YIPF3-202ENST00000372422 PLEKHH2Q8IVE3 1493 aa22.71■■□□□ 1.23
YIPF3-202ENST00000372422 FANCAO15360 1455 aa22.71■■□□□ 1.23
YIPF3-202ENST00000372422 ZNF644Q9H582 1327 aaPredicted RBP22.7■■□□□ 1.22
YIPF3-202ENST00000372422 CFAP74Q9C0B2 1584 aa22.69■■□□□ 1.22
YIPF3-202ENST00000372422 SAMD9LQ8IVG5 1584 aa22.68■■□□□ 1.22
YIPF3-202ENST00000372422 ITGAEP38570 1179 aa22.67■■□□□ 1.22
YIPF3-202ENST00000372422 KIAA1107Q9UPP5 1409 aa22.66■■□□□ 1.22
YIPF3-202ENST00000372422 KIF13AQ9H1H9 1805 aa22.65■■□□□ 1.22
YIPF3-202ENST00000372422 RSPH4AQ5TD94 716 aa22.65■■□□□ 1.22
YIPF3-202ENST00000372422 TEX14Q8IWB6 1497 aa22.64■■□□□ 1.21
YIPF3-202ENST00000372422 NEO1Q92859 1461 aa22.64■■□□□ 1.21
YIPF3-202ENST00000372422 DAPK1P53355 1430 aa22.62■■□□□ 1.21
YIPF3-202ENST00000372422 AKNAQ7Z591 1439 aa22.62■■□□□ 1.21
YIPF3-202ENST00000372422 ABCC1P33527 1531 aa22.62■■□□□ 1.21
YIPF3-202ENST00000372422 DNMT1P26358 1616 aaKnown RBP22.62■■□□□ 1.21
YIPF3-202ENST00000372422 SYCP2Q9BX26 1530 aa22.61■■□□□ 1.21
YIPF3-202ENST00000372422 ADGRL1O94910 1474 aa22.61■■□□□ 1.21
YIPF3-202ENST00000372422 ARHGEF5Q12774 1597 aa22.61■■□□□ 1.21
YIPF3-202ENST00000372422 HNRNPMP52272 730 aaKnown RBP eCLIP22.6■■□□□ 1.21
YIPF3-202ENST00000372422 MBD5Q9P267 1494 aa22.6■■□□□ 1.21
YIPF3-202ENST00000372422 TRHP20396 242 aaPredicted RBP22.59■■□□□ 1.21
YIPF3-202ENST00000372422 ABCC5O15440 1437 aa22.59■■□□□ 1.21
YIPF3-202ENST00000372422 CCDC141Q6ZP82 1450 aa22.59■■□□□ 1.21
YIPF3-202ENST00000372422 TSPY4P0CV99 314 aa22.58■■□□□ 1.2
YIPF3-202ENST00000372422 TSPY10P0CW01 314 aa22.58■■□□□ 1.2
YIPF3-202ENST00000372422 SCAPERQ9BY12 1400 aa22.56■■□□□ 1.2
YIPF3-202ENST00000372422 TSPOAP1O95153 1857 aa22.55■■□□□ 1.2
YIPF3-202ENST00000372422 SHANK2Q9UPX8 1470 aa22.55■■□□□ 1.2
YIPF3-202ENST00000372422 ARHGEF12Q9NZN5 1544 aa22.54■■□□□ 1.2
YIPF3-202ENST00000372422 PTPRKQ15262 1439 aa22.53■■□□□ 1.2
YIPF3-202ENST00000372422 CROCC2H7BZ55 1655 aa22.53■■□□□ 1.2
YIPF3-202ENST00000372422 PPRC1Q5VV67 1664 aaKnown RBP22.53■■□□□ 1.2
YIPF3-202ENST00000372422 C9orf84Q5VXU9 1444 aa22.51■■□□□ 1.19
YIPF3-202ENST00000372422 CHIC2Q9UKJ5 165 aa22.5■■□□□ 1.19
YIPF3-202ENST00000372422 ROCK1Q13464 1354 aa22.5■■□□□ 1.19
YIPF3-202ENST00000372422 TRAPPC8Q9Y2L5 1435 aa22.5■■□□□ 1.19
YIPF3-202ENST00000372422 ZNF518AQ6AHZ1 1483 aa22.5■■□□□ 1.19
YIPF3-202ENST00000372422 DENND4BO75064 1496 aaPredicted RBP22.49■■□□□ 1.19
YIPF3-202ENST00000372422 ANKRD30AQ9BXX3 1397 aa22.48■■□□□ 1.19
YIPF3-202ENST00000372422 POGZQ7Z3K3 1410 aa22.48■■□□□ 1.19
YIPF3-202ENST00000372422 MAST1Q9Y2H9 1570 aa22.46■■□□□ 1.19
YIPF3-202ENST00000372422 AFAP1Q8N556 730 aa22.46■■□□□ 1.19
YIPF3-202ENST00000372422 ADGRL2O95490 1459 aa22.46■■□□□ 1.19
YIPF3-202ENST00000372422 ADGBQ8N7X0 1667 aa22.46■■□□□ 1.19
YIPF3-202ENST00000372422 SPAG9O60271 1321 aaKnown RBP22.46■■□□□ 1.19
YIPF3-202ENST00000372422 HFM1A2PYH4 1435 aa22.45■■□□□ 1.19
YIPF3-202ENST00000372422 RTEL1-TNFRSF6BF6WH68 1400 aa22.43■■□□□ 1.18
YIPF3-202ENST00000372422 HRCP23327 699 aa22.43■■□□□ 1.18
YIPF3-202ENST00000372422 NCOA1Q15788 1441 aa22.43■■□□□ 1.18
YIPF3-202ENST00000372422 SETD5Q9C0A6 1442 aa22.42■■□□□ 1.18
YIPF3-202ENST00000372422 RRP7BPQ9NSQ0 103 aa22.42■■□□□ 1.18
YIPF3-202ENST00000372422 MYT1LQ9UL68 1186 aa22.41■■□□□ 1.18
YIPF3-202ENST00000372422 KDM5CP41229 1560 aa22.41■■□□□ 1.18
YIPF3-202ENST00000372422 NAIPQ13075 1403 aa22.4■■□□□ 1.18
YIPF3-202ENST00000372422 RAPGEF3O95398 923 aa22.39■■□□□ 1.18
YIPF3-202ENST00000372422 ZFYVE16Q7Z3T8 1539 aa22.38■■□□□ 1.17
YIPF3-202ENST00000372422 PLXNC1O60486 1568 aa22.38■■□□□ 1.17
YIPF3-202ENST00000372422 ATP7AQ04656 1500 aa22.38■■□□□ 1.17
YIPF3-202ENST00000372422 GCC2Q8IWJ2 1684 aa22.37■■□□□ 1.17
YIPF3-202ENST00000372422 INO80Q9ULG1 1556 aaPredicted RBP22.37■■□□□ 1.17
YIPF3-202ENST00000372422 RICTORQ6R327 1708 aa22.37■■□□□ 1.17
YIPF3-202ENST00000372422 MLH3Q9UHC1 1453 aa22.37■■□□□ 1.17
YIPF3-202ENST00000372422 KIF15Q9NS87 1388 aa22.37■■□□□ 1.17
YIPF3-202ENST00000372422 RAB3GAP2Q9H2M9 1393 aa22.35■■□□□ 1.17
YIPF3-202ENST00000372422 HECW2Q9P2P5 1572 aa22.35■■□□□ 1.17
YIPF3-202ENST00000372422 ACIN1Q9UKV3 1341 aaKnown RBP22.34■■□□□ 1.17
YIPF3-202ENST00000372422 FRMPD1Q5SYB0 1578 aa22.33■■□□□ 1.16
YIPF3-202ENST00000372422 ZMYM4Q5VZL5 1548 aa22.32■■□□□ 1.16
YIPF3-202ENST00000372422 ANKRD50Q9ULJ7 1429 aa22.32■■□□□ 1.16
YIPF3-202ENST00000372422 MAGI2Q86UL8 1455 aa22.32■■□□□ 1.16
YIPF3-202ENST00000372422 DUOX2Q9NRD8 1548 aa22.31■■□□□ 1.16
YIPF3-202ENST00000372422 KIDINS220Q9ULH0 1771 aa22.3■■□□□ 1.16
YIPF3-202ENST00000372422 COL17A1Q9UMD9 1497 aaPredicted RBP22.29■■□□□ 1.16
YIPF3-202ENST00000372422 ERBINQ96RT1 1412 aa22.27■■□□□ 1.16
YIPF3-202ENST00000372422 KDM6BO15054 1643 aa22.26■■□□□ 1.15
YIPF3-202ENST00000372422 DHX29Q7Z478 1369 aaKnown RBP22.23■■□□□ 1.15
YIPF3-202ENST00000372422 A2MP01023 1474 aa22.22■■□□□ 1.15
YIPF3-202ENST00000372422 ABCA6Q8N139 1617 aa22.22■■□□□ 1.15
YIPF3-202ENST00000372422 DIP2CQ9Y2E4 1556 aa22.21■■□□□ 1.15
YIPF3-202ENST00000372422 YEATS2Q9ULM3 1422 aa22.2■■□□□ 1.14
YIPF3-202ENST00000372422 TRIM52Q96A61 297 aa22.19■■□□□ 1.14
YIPF3-202ENST00000372422 ATP10AO60312 1499 aa22.18■■□□□ 1.14
YIPF3-202ENST00000372422 EIF2AK4Q9P2K8 1649 aaKnown RBP22.17■■□□□ 1.14
YIPF3-202ENST00000372422 ARHGEF40Q8TER5 1519 aa22.17■■□□□ 1.14
YIPF3-202ENST00000372422 CCER1Q8TC90 406 aaPredicted RBP22.14■■□□□ 1.13
YIPF3-202ENST00000372422 REREQ9P2R6 1566 aa22.13■■□□□ 1.13
YIPF3-202ENST00000372422 KIF3BO15066 747 aa22.12■■□□□ 1.13
YIPF3-202ENST00000372422 NUP155O75694 1391 aa22.11■■□□□ 1.13
YIPF3-202ENST00000372422 DHX57Q6P158 1386 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms