RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 UGGT2Q9NYU1 1516 aa23.88■■□□□ 1.41
VEGFA-205ENST00000372067 PLB1Q6P1J6 1458 aa23.88■■□□□ 1.41
VEGFA-205ENST00000372067 TSPY4P0CV99 314 aa23.86■■□□□ 1.41
VEGFA-205ENST00000372067 TSPY10P0CW01 314 aa23.86■■□□□ 1.41
VEGFA-205ENST00000372067 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
VEGFA-205ENST00000372067 MAGI1Q96QZ7 1491 aaPredicted RBP23.83■■□□□ 1.41
VEGFA-205ENST00000372067 DISP1Q96F81 1524 aa23.83■■□□□ 1.4
VEGFA-205ENST00000372067 L3MBTL2Q969R5 705 aa23.81■■□□□ 1.4
VEGFA-205ENST00000372067 LRRIQ1Q96JM4 1722 aa23.8■■□□□ 1.4
VEGFA-205ENST00000372067 MIA2Q96PC5 1412 aa23.8■■□□□ 1.4
VEGFA-205ENST00000372067 NUP153P49790 1475 aaKnown RBP23.8■■□□□ 1.4
VEGFA-205ENST00000372067 KIAA0556O60303 1618 aa23.79■■□□□ 1.4
VEGFA-205ENST00000372067 EIF4G2P78344 907 aaKnown RBP eCLIP23.79■■□□□ 1.4
VEGFA-205ENST00000372067 HSPA5P11021 654 aaKnown RBP23.77■■□□□ 1.4
VEGFA-205ENST00000372067 HNRNPMP52272 730 aaKnown RBP eCLIP23.76■■□□□ 1.391e-12■■■■■ 34.3
VEGFA-205ENST00000372067 MYT1LQ9UL68 1186 aa23.76■■□□□ 1.39
VEGFA-205ENST00000372067 PTPRGP23470 1445 aa23.75■■□□□ 1.39
VEGFA-205ENST00000372067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.75■■□□□ 1.391e-12■■□□□ 14.3
VEGFA-205ENST00000372067 TROQ12816 1431 aaPredicted RBP23.75■■□□□ 1.39
VEGFA-205ENST00000372067 DAPK1P53355 1430 aa23.73■■□□□ 1.39
VEGFA-205ENST00000372067 BCANQ96GW7 911 aa23.72■■□□□ 1.39
VEGFA-205ENST00000372067 RAPGEF6Q8TEU7 1601 aa23.72■■□□□ 1.39
VEGFA-205ENST00000372067 PKD2Q13563 968 aa23.72■■□□□ 1.39
VEGFA-205ENST00000372067 KDM2AQ9Y2K7 1162 aa23.72■■□□□ 1.39
VEGFA-205ENST00000372067 ABCC5O15440 1437 aa23.7■■□□□ 1.38
VEGFA-205ENST00000372067 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
VEGFA-205ENST00000372067 TCOF1Q13428 1488 aaKnown RBP23.67■■□□□ 1.38
VEGFA-205ENST00000372067 NEFLP07196 543 aa23.66■■□□□ 1.38
VEGFA-205ENST00000372067 ANKRD30AQ9BXX3 1397 aa23.66■■□□□ 1.38
VEGFA-205ENST00000372067 NUP155O75694 1391 aa23.62■■□□□ 1.37
VEGFA-205ENST00000372067 ARHGEF11O15085 1522 aa23.62■■□□□ 1.37
VEGFA-205ENST00000372067 CAMSAP2Q08AD1 1489 aa23.6■■□□□ 1.37
VEGFA-205ENST00000372067 NUP160Q12769 1436 aa23.58■■□□□ 1.37
VEGFA-205ENST00000372067 HNRNPUQ00839 825 aaKnown RBP eCLIP23.58■■□□□ 1.368e-7■□□□□ 10.9
VEGFA-205ENST00000372067 KDM6BO15054 1643 aa23.57■■□□□ 1.36
VEGFA-205ENST00000372067 GPATCH8Q9UKJ3 1502 aaKnown RBP23.57■■□□□ 1.36
VEGFA-205ENST00000372067 MSH5O43196 834 aa23.56■■□□□ 1.36
VEGFA-205ENST00000372067 RGL3Q3MIN7 710 aa23.56■■□□□ 1.36
VEGFA-205ENST00000372067 ROCK1Q13464 1354 aa23.55■■□□□ 1.36
VEGFA-205ENST00000372067 NBPF8Q3BBV2 869 aa23.55■■□□□ 1.36
VEGFA-205ENST00000372067 FKBP8Q14318 412 aa23.53■■□□□ 1.36
VEGFA-205ENST00000372067 FAM9BQ8IZU0 186 aa23.53■■□□□ 1.36
VEGFA-205ENST00000372067 AKNAQ7Z591 1439 aa23.53■■□□□ 1.36
VEGFA-205ENST00000372067 ATP10BO94823 1461 aa23.53■■□□□ 1.36
VEGFA-205ENST00000372067 ANKRD50Q9ULJ7 1429 aa23.51■■□□□ 1.35
VEGFA-205ENST00000372067 CCER2I3L3R5 266 aa23.5■■□□□ 1.35
VEGFA-205ENST00000372067 WASHC2AQ641Q2 1341 aa23.5■■□□□ 1.35
VEGFA-205ENST00000372067 NCOA1Q15788 1441 aa23.49■■□□□ 1.35
VEGFA-205ENST00000372067 KIF14Q15058 1648 aa23.49■■□□□ 1.35
VEGFA-205ENST00000372067 RBM19Q9Y4C8 960 aaKnown RBP23.49■■□□□ 1.35
VEGFA-205ENST00000372067 SALL2Q9Y467 1007 aaPredicted RBP23.49■■□□□ 1.35
VEGFA-205ENST00000372067 ANKRD30BQ9BXX2 1392 aa23.48■■□□□ 1.35
VEGFA-205ENST00000372067 DCAF11Q8TEB1 546 aa23.48■■□□□ 1.35
VEGFA-205ENST00000372067 KIF15Q9NS87 1388 aa23.46■■□□□ 1.35
VEGFA-205ENST00000372067 C9orf84Q5VXU9 1444 aa23.45■■□□□ 1.35
VEGFA-205ENST00000372067 MRS2Q9HD23 443 aa23.45■■□□□ 1.34
VEGFA-205ENST00000372067 CARD11Q9BXL7 1154 aa23.45■■□□□ 1.34
VEGFA-205ENST00000372067 DNMT1P26358 1616 aaKnown RBP23.42■■□□□ 1.34
VEGFA-205ENST00000372067 SENP3-EIF4A1A0A087X0R7 540 aa23.41■■□□□ 1.34
VEGFA-205ENST00000372067 GCC2Q8IWJ2 1684 aa23.41■■□□□ 1.34
VEGFA-205ENST00000372067 C11orf95C9JLR9 678 aaPredicted RBP23.41■■□□□ 1.34
VEGFA-205ENST00000372067 CCDC136Q96JN2 1154 aa23.4■■□□□ 1.34
VEGFA-205ENST00000372067 KIAA1107Q9UPP5 1409 aa23.37■■□□□ 1.33
VEGFA-205ENST00000372067 DENND4BO75064 1496 aaPredicted RBP23.36■■□□□ 1.33
VEGFA-205ENST00000372067 EFCAB2Q5VUJ9 269 aa23.36■■□□□ 1.33
VEGFA-205ENST00000372067 ITSN2Q9NZM3 1697 aa23.35■■□□□ 1.33
VEGFA-205ENST00000372067 RPRD2Q5VT52 1461 aaKnown RBP23.35■■□□□ 1.33
VEGFA-205ENST00000372067 IRX6P78412 446 aaPredicted RBP23.34■■□□□ 1.33
VEGFA-205ENST00000372067 ARHGAP5Q13017 1502 aa23.34■■□□□ 1.33
VEGFA-205ENST00000372067 RSPH4AQ5TD94 716 aa23.33■■□□□ 1.33
VEGFA-205ENST00000372067 CCDC7Q96M83 1385 aa23.33■■□□□ 1.32
VEGFA-205ENST00000372067 UBE2Q2Q8WVN8 375 aa23.32■■□□□ 1.32
VEGFA-205ENST00000372067 KIF7Q2M1P5 1343 aa23.32■■□□□ 1.32
VEGFA-205ENST00000372067 ABCA8O94911 1581 aa23.3■■□□□ 1.32
VEGFA-205ENST00000372067 PZPP20742 1482 aa23.29■■□□□ 1.32
VEGFA-205ENST00000372067 USP47Q96K76 1375 aa23.29■■□□□ 1.32
VEGFA-205ENST00000372067 NPM1P06748 294 aaKnown RBP eCLIP23.29■■□□□ 1.32
VEGFA-205ENST00000372067 CCDC184Q52MB2 194 aa23.27■■□□□ 1.32
VEGFA-205ENST00000372067 PRKRIP1Q9H875 184 aaPredicted RBP23.26■■□□□ 1.31
VEGFA-205ENST00000372067 DEKP35659 375 aaKnown RBP23.25■■□□□ 1.31
VEGFA-205ENST00000372067 ST20-MTHFSA0A0A6YYL1 179 aa23.24■■□□□ 1.31
VEGFA-205ENST00000372067 CNTLNQ9NXG0 1405 aa23.24■■□□□ 1.31
VEGFA-205ENST00000372067 AFAP1Q8N556 730 aa23.24■■□□□ 1.31
VEGFA-205ENST00000372067 ABCC10Q5T3U5 1492 aa23.23■■□□□ 1.31
VEGFA-205ENST00000372067 CCDC141Q6ZP82 1450 aa23.23■■□□□ 1.31
VEGFA-205ENST00000372067 CHD1O14646 1710 aa23.23■■□□□ 1.31
VEGFA-205ENST00000372067 SPAG9O60271 1321 aaKnown RBP23.22■■□□□ 1.31
VEGFA-205ENST00000372067 ROCK2O75116 1388 aaKnown RBP23.21■■□□□ 1.31
VEGFA-205ENST00000372067 CCDC144AA2RUR9 1427 aa23.2■■□□□ 1.3
VEGFA-205ENST00000372067 ERCC6L2Q5T890 1561 aa23.19■■□□□ 1.3
VEGFA-205ENST00000372067 TMC1Q8TDI8 760 aa23.19■■□□□ 1.3
VEGFA-205ENST00000372067 KDM5BQ9UGL1 1544 aa23.19■■□□□ 1.3
VEGFA-205ENST00000372067 ADGRL2O95490 1459 aa23.17■■□□□ 1.3
VEGFA-205ENST00000372067 TEX14Q8IWB6 1497 aa23.17■■□□□ 1.3
VEGFA-205ENST00000372067 CHGAP10645 457 aaKnown RBP23.17■■□□□ 1.3
VEGFA-205ENST00000372067 SYCP2Q9BX26 1530 aa23.15■■□□□ 1.3
VEGFA-205ENST00000372067 CDC42BPAQ5VT25 1732 aa23.14■■□□□ 1.3
VEGFA-205ENST00000372067 KIF3BO15066 747 aa23.12■■□□□ 1.29
VEGFA-205ENST00000372067 ADGBQ8N7X0 1667 aa23.12■■□□□ 1.29
VEGFA-205ENST00000372067 NBPF1Q3BBV0 1214 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms