RNA–Protein interactions for RNA: ENST00000371454.6

LRP8-204, Transcript of LDL receptor related protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRP8, Length 3,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-204ENST00000371454 MAP3K1Q13233 1512 aa25.94■■□□□ 1.74
LRP8-204ENST00000371454 EXOC6Q8TAG9 804 aa25.94■■□□□ 1.74
LRP8-204ENST00000371454 KDM5BQ9UGL1 1544 aa25.92■■□□□ 1.74
LRP8-204ENST00000371454 TOPBP1Q92547 1522 aa25.91■■□□□ 1.74
LRP8-204ENST00000371454 ERCC6Q03468 1493 aa25.91■■□□□ 1.74
LRP8-204ENST00000371454 SLC4A3P48751 1232 aa25.91■■□□□ 1.74
LRP8-204ENST00000371454 DENND4BO75064 1496 aaPredicted RBP25.91■■□□□ 1.74
LRP8-204ENST00000371454 CFAP43Q8NDM7 1665 aa25.9■■□□□ 1.74
LRP8-204ENST00000371454 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.89■■□□□ 1.73
LRP8-204ENST00000371454 NUDCQ9Y266 331 aa25.88■■□□□ 1.73
LRP8-204ENST00000371454 URB2Q14146 1524 aaKnown RBP25.87■■□□□ 1.73
LRP8-204ENST00000371454 CDCA7LQ96GN5 454 aa25.85■■□□□ 1.73
LRP8-204ENST00000371454 LAMC3Q9Y6N6 1575 aa25.85■■□□□ 1.73
LRP8-204ENST00000371454 RGL3Q3MIN7 710 aa25.84■■□□□ 1.73
LRP8-204ENST00000371454 IPO9Q96P70 1041 aaKnown RBP25.84■■□□□ 1.73
LRP8-204ENST00000371454 CDK13Q14004 1512 aaKnown RBP25.84■■□□□ 1.73
LRP8-204ENST00000371454 FBLN2P98095 1184 aa25.83■■□□□ 1.73
LRP8-204ENST00000371454 PKD2Q13563 968 aa25.83■■□□□ 1.73
LRP8-204ENST00000371454 SNAPC4Q5SXM2 1469 aa25.82■■□□□ 1.72
LRP8-204ENST00000371454 MAGI3Q5TCQ9 1506 aa25.82■■□□□ 1.72
LRP8-204ENST00000371454 PRDM2Q13029 1718 aa25.81■■□□□ 1.72
LRP8-204ENST00000371454 CARD11Q9BXL7 1154 aa25.8■■□□□ 1.72
LRP8-204ENST00000371454 DNMBPQ6XZF7 1577 aa25.8■■□□□ 1.72
LRP8-204ENST00000371454 NCOA1Q15788 1441 aa25.8■■□□□ 1.72
LRP8-204ENST00000371454 CC2D1BQ5T0F9 858 aaKnown RBP25.79■■□□□ 1.72
LRP8-204ENST00000371454 NEFMP07197 916 aa25.79■■□□□ 1.72
LRP8-204ENST00000371454 ST20-MTHFSA0A0A6YYL1 179 aa25.78■■□□□ 1.72
LRP8-204ENST00000371454 KIF21AQ7Z4S6 1674 aa25.78■■□□□ 1.72
LRP8-204ENST00000371454 ABCA10Q8WWZ4 1543 aa25.76■■□□□ 1.71
LRP8-204ENST00000371454 DCAF11Q8TEB1 546 aa25.74■■□□□ 1.71
LRP8-204ENST00000371454 USP47Q96K76 1375 aa25.74■■□□□ 1.71
LRP8-204ENST00000371454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.73■■□□□ 1.715e-10■■■■■ 69.7
LRP8-204ENST00000371454 PNISRQ8TF01 805 aaKnown RBP25.72■■□□□ 1.71
LRP8-204ENST00000371454 ERICH6BQ5W0A0 696 aa25.71■■□□□ 1.71
LRP8-204ENST00000371454 ANKRD30BQ9BXX2 1392 aa25.7■■□□□ 1.7
LRP8-204ENST00000371454 CFDP1Q9UEE9 299 aaPredicted RBP25.69■■□□□ 1.7
LRP8-204ENST00000371454 GAPVD1Q14C86 1478 aa25.68■■□□□ 1.7
LRP8-204ENST00000371454 LRRIQ1Q96JM4 1722 aa25.68■■□□□ 1.7
LRP8-204ENST00000371454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.67■■□□□ 1.75e-10■■■□□ 17.5
LRP8-204ENST00000371454 PDE4AP27815 886 aa25.65■■□□□ 1.7
LRP8-204ENST00000371454 RCAN3Q9UKA8 241 aa25.65■■□□□ 1.7
LRP8-204ENST00000371454 GRIN2BQ13224 1484 aa25.63■■□□□ 1.69
LRP8-204ENST00000371454 RRP1P56182 461 aaKnown RBP25.62■■□□□ 1.69
LRP8-204ENST00000371454 DHX29Q7Z478 1369 aaKnown RBP25.62■■□□□ 1.69
LRP8-204ENST00000371454 EFCAB5A4FU69 1503 aa25.62■■□□□ 1.69
LRP8-204ENST00000371454 C20orf194Q5TEA3 1177 aa25.6■■□□□ 1.69
LRP8-204ENST00000371454 SMG6Q86US8 1419 aaKnown RBP25.59■■□□□ 1.69
LRP8-204ENST00000371454 SUPT6HQ7KZ85 1726 aaKnown RBP25.59■■□□□ 1.69
LRP8-204ENST00000371454 ARXQ96QS3 562 aa25.58■■□□□ 1.69
LRP8-204ENST00000371454 MRC2Q9UBG0 1479 aa25.57■■□□□ 1.68
LRP8-204ENST00000371454 BRPF3Q9ULD4 1205 aa25.56■■□□□ 1.68
LRP8-204ENST00000371454 RGS3P49796 1198 aa25.56■■□□□ 1.68
LRP8-204ENST00000371454 NBPF1Q3BBV0 1214 aa25.56■■□□□ 1.68
LRP8-204ENST00000371454 CRBNQ96SW2 442 aa25.56■■□□□ 1.68
LRP8-204ENST00000371454 THOC2Q8NI27 1593 aaKnown RBP25.56■■□□□ 1.68
LRP8-204ENST00000371454 UGGT2Q9NYU1 1516 aa25.55■■□□□ 1.68
LRP8-204ENST00000371454 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
LRP8-204ENST00000371454 RPRD2Q5VT52 1461 aaKnown RBP25.53■■□□□ 1.68
LRP8-204ENST00000371454 EPRSP07814 1512 aaKnown RBP25.52■■□□□ 1.68
LRP8-204ENST00000371454 ABCC5O15440 1437 aa25.52■■□□□ 1.68
LRP8-204ENST00000371454 SPATA31E1Q6ZUB1 1445 aa25.52■■□□□ 1.68
LRP8-204ENST00000371454 PRKCSHP14314 528 aaPredicted RBP25.51■■□□□ 1.67
LRP8-204ENST00000371454 EHBP1L1Q8N3D4 1523 aa25.51■■□□□ 1.67
LRP8-204ENST00000371454 NUP155O75694 1391 aa25.51■■□□□ 1.67
LRP8-204ENST00000371454 DAPK1P53355 1430 aa25.5■■□□□ 1.67
LRP8-204ENST00000371454 CUL7Q14999 1698 aa25.5■■□□□ 1.67
LRP8-204ENST00000371454 TEX14Q8IWB6 1497 aa25.49■■□□□ 1.67
LRP8-204ENST00000371454 HNRNPMP52272 730 aaKnown RBP eCLIP25.49■■□□□ 1.67
LRP8-204ENST00000371454 PRG4Q92954 1404 aaPredicted RBP25.49■■□□□ 1.67
LRP8-204ENST00000371454 CTTNBP2Q8WZ74 1663 aa25.48■■□□□ 1.67
LRP8-204ENST00000371454 EIF5BO60841 1220 aaKnown RBP25.47■■□□□ 1.67
LRP8-204ENST00000371454 MYT1LQ9UL68 1186 aa25.45■■□□□ 1.66
LRP8-204ENST00000371454 BCORL1Q5H9F3 1711 aa25.42■■□□□ 1.66
LRP8-204ENST00000371454 BACH2Q9BYV9 841 aa25.42■■□□□ 1.66
LRP8-204ENST00000371454 SENP3Q9H4L4 574 aaPredicted RBP25.42■■□□□ 1.66
LRP8-204ENST00000371454 DAXXQ9UER7 740 aaPredicted RBP25.42■■□□□ 1.66
LRP8-204ENST00000371454 CCDC146Q8IYE0 955 aa25.4■■□□□ 1.66
LRP8-204ENST00000371454 MYBBP1AQ9BQG0 1328 aaKnown RBP25.4■■□□□ 1.66
LRP8-204ENST00000371454 ROCK2O75116 1388 aaKnown RBP25.39■■□□□ 1.65
LRP8-204ENST00000371454 RNF123Q5XPI4 1314 aa25.38■■□□□ 1.65
LRP8-204ENST00000371454 PANK3Q9H999 370 aa25.37■■□□□ 1.65
LRP8-204ENST00000371454 CHMP7Q8WUX9 453 aaPredicted RBP25.35■■□□□ 1.65
LRP8-204ENST00000371454 HECW1Q76N89 1606 aa25.35■■□□□ 1.65
LRP8-204ENST00000371454 TCERG1O14776 1098 aaKnown RBP25.35■■□□□ 1.65
LRP8-204ENST00000371454 KIF15Q9NS87 1388 aa25.33■■□□□ 1.65
LRP8-204ENST00000371454 ADAMTS8Q9UP79 889 aa25.32■■□□□ 1.64
LRP8-204ENST00000371454 PZPP20742 1482 aa25.31■■□□□ 1.64
LRP8-204ENST00000371454 SAMD9Q5K651 1589 aa25.31■■□□□ 1.64
LRP8-204ENST00000371454 TSPY4P0CV99 314 aa25.3■■□□□ 1.64
LRP8-204ENST00000371454 TSPY10P0CW01 314 aa25.3■■□□□ 1.64
LRP8-204ENST00000371454 NLRP13Q86W25 1043 aa25.3■■□□□ 1.64
LRP8-204ENST00000371454 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
LRP8-204ENST00000371454 NFKBIBQ15653 356 aa25.29■■□□□ 1.64
LRP8-204ENST00000371454 TCOF1Q13428 1488 aaKnown RBP25.29■■□□□ 1.64
LRP8-204ENST00000371454 NEUROD2Q15784 382 aa25.28■■□□□ 1.64
LRP8-204ENST00000371454 FRAT1Q92837 279 aaPredicted RBP25.28■■□□□ 1.64
LRP8-204ENST00000371454 SPRYD3Q8NCJ5 442 aa25.27■■□□□ 1.64
LRP8-204ENST00000371454 FRAT2O75474 233 aaPredicted RBP25.26■■□□□ 1.63
LRP8-204ENST00000371454 KIAA1107Q9UPP5 1409 aa25.26■■□□□ 1.63
LRP8-204ENST00000371454 KTN1Q86UP2 1357 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms