RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 GRIN2BQ13224 1484 aa15.88■□□□□ 0.13
SMARCA1-201ENST00000371121 SUPT6HQ7KZ85 1726 aaKnown RBP15.87■□□□□ 0.13
SMARCA1-201ENST00000371121 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
SMARCA1-201ENST00000371121 NUDCQ9Y266 331 aa15.87■□□□□ 0.13
SMARCA1-201ENST00000371121 FOXD1Q16676 465 aa15.86■□□□□ 0.13
SMARCA1-201ENST00000371121 ATP1B4Q9UN42 357 aaPredicted RBP15.86■□□□□ 0.13
SMARCA1-201ENST00000371121 TCOF1Q13428 1488 aaKnown RBP15.85■□□□□ 0.13
SMARCA1-201ENST00000371121 ANP32AP39687 249 aaKnown RBP15.85■□□□□ 0.13
SMARCA1-201ENST00000371121 RPRD2Q5VT52 1461 aaKnown RBP15.83■□□□□ 0.13
SMARCA1-201ENST00000371121 BRPF3Q9ULD4 1205 aa15.82■□□□□ 0.12
SMARCA1-201ENST00000371121 LAS1LQ9Y4W2 734 aaKnown RBP15.82■□□□□ 0.12
SMARCA1-201ENST00000371121 UBE2Q2Q8WVN8 375 aa15.82■□□□□ 0.12
SMARCA1-201ENST00000371121 RRP7BPQ9NSQ0 103 aa15.81■□□□□ 0.12
SMARCA1-201ENST00000371121 ANKRD30BQ9BXX2 1392 aa15.8■□□□□ 0.12
SMARCA1-201ENST00000371121 SKAP1Q86WV1 359 aa15.8■□□□□ 0.12
SMARCA1-201ENST00000371121 MBD5Q9P267 1494 aa15.8■□□□□ 0.12
SMARCA1-201ENST00000371121 RAD54L2Q9Y4B4 1467 aa15.79■□□□□ 0.12
SMARCA1-201ENST00000371121 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
SMARCA1-201ENST00000371121 EHBP1L1Q8N3D4 1523 aa15.78■□□□□ 0.12
SMARCA1-201ENST00000371121 NEFMP07197 916 aa15.78■□□□□ 0.12
SMARCA1-201ENST00000371121 RTL5Q5HYW3 569 aaPredicted RBP15.78■□□□□ 0.12
SMARCA1-201ENST00000371121 MPHOSPH9Q99550 1183 aa15.78■□□□□ 0.12
SMARCA1-201ENST00000371121 BACH2Q9BYV9 841 aa15.78■□□□□ 0.12
SMARCA1-201ENST00000371121 KDM5CP41229 1560 aa15.78■□□□□ 0.12
SMARCA1-201ENST00000371121 PNISRQ8TF01 805 aaKnown RBP15.78■□□□□ 0.12
SMARCA1-201ENST00000371121 MTUS2Q5JR59 1369 aa15.77■□□□□ 0.12
SMARCA1-201ENST00000371121 CUL7Q14999 1698 aa15.77■□□□□ 0.12
SMARCA1-201ENST00000371121 LRPPRCP42704 1394 aaKnown RBP15.77■□□□□ 0.11
SMARCA1-201ENST00000371121 THOC2Q8NI27 1593 aaKnown RBP15.76■□□□□ 0.11
SMARCA1-201ENST00000371121 PDE4AP27815 886 aa15.76■□□□□ 0.11
SMARCA1-201ENST00000371121 EXOC6Q8TAG9 804 aa15.76■□□□□ 0.11
SMARCA1-201ENST00000371121 E9PCH4 1651 aa15.76■□□□□ 0.11
SMARCA1-201ENST00000371121 CHIC2Q9UKJ5 165 aa15.75■□□□□ 0.11
SMARCA1-201ENST00000371121 ABCA10Q8WWZ4 1543 aa15.75■□□□□ 0.11
SMARCA1-201ENST00000371121 NPM2Q86SE8 214 aaKnown RBP15.74■□□□□ 0.11
SMARCA1-201ENST00000371121 USP35Q9P2H5 1018 aa15.73■□□□□ 0.11
SMARCA1-201ENST00000371121 MIA2Q96PC5 1412 aa15.71■□□□□ 0.1
SMARCA1-201ENST00000371121 RRP1P56182 461 aaKnown RBP15.7■□□□□ 0.1
SMARCA1-201ENST00000371121 POLA1P09884 1462 aaPredicted RBP15.69■□□□□ 0.1
SMARCA1-201ENST00000371121 KIF14Q15058 1648 aa15.68■□□□□ 0.1
SMARCA1-201ENST00000371121 CADPSQ9ULU8 1353 aa15.68■□□□□ 0.1
SMARCA1-201ENST00000371121 CNGB1Q14028 1251 aaPredicted RBP15.67■□□□□ 0.1
SMARCA1-201ENST00000371121 KIF21AQ7Z4S6 1674 aa15.67■□□□□ 0.1
SMARCA1-201ENST00000371121 TCERG1O14776 1098 aaKnown RBP15.67■□□□□ 0.1
SMARCA1-201ENST00000371121 PZPP20742 1482 aa15.66■□□□□ 0.1
SMARCA1-201ENST00000371121 DCAF11Q8TEB1 546 aa15.65■□□□□ 0.1
SMARCA1-201ENST00000371121 FRAT1Q92837 279 aaPredicted RBP15.65■□□□□ 0.1
SMARCA1-201ENST00000371121 DNMBPQ6XZF7 1577 aa15.65■□□□□ 0.1
SMARCA1-201ENST00000371121 GSE1Q14687 1217 aa15.65■□□□□ 0.1
SMARCA1-201ENST00000371121 NFKBIBQ15653 356 aa15.64■□□□□ 0.09
SMARCA1-201ENST00000371121 DNMT1P26358 1616 aaKnown RBP15.63■□□□□ 0.09
SMARCA1-201ENST00000371121 SLC4A3P48751 1232 aa15.63■□□□□ 0.09
SMARCA1-201ENST00000371121 USP47Q96K76 1375 aa15.62■□□□□ 0.09
SMARCA1-201ENST00000371121 TOPBP1Q92547 1522 aa15.62■□□□□ 0.09
SMARCA1-201ENST00000371121 NESP48681 1621 aa15.62■□□□□ 0.09
SMARCA1-201ENST00000371121 CDK13Q14004 1512 aaKnown RBP15.62■□□□□ 0.09
SMARCA1-201ENST00000371121 MS4A1P11836 297 aa15.61■□□□□ 0.09
SMARCA1-201ENST00000371121 DAPK1P53355 1430 aa15.59■□□□□ 0.09
SMARCA1-201ENST00000371121 LAMC3Q9Y6N6 1575 aa15.59■□□□□ 0.09
SMARCA1-201ENST00000371121 ABCC5O15440 1437 aa15.59■□□□□ 0.09
SMARCA1-201ENST00000371121 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
SMARCA1-201ENST00000371121 CDCA7LQ96GN5 454 aa15.59■□□□□ 0.09
SMARCA1-201ENST00000371121 EPRSP07814 1512 aaKnown RBP15.58■□□□□ 0.08
SMARCA1-201ENST00000371121 PLIN1O60240 522 aa15.57■□□□□ 0.08
SMARCA1-201ENST00000371121 RCAN3Q9UKA8 241 aa15.57■□□□□ 0.08
SMARCA1-201ENST00000371121 KDM2BQ8NHM5 1336 aa15.57■□□□□ 0.08
SMARCA1-201ENST00000371121 PPM1GO15355 546 aaPredicted RBP15.56■□□□□ 0.08
SMARCA1-201ENST00000371121 VIRMAQ69YN4 1812 aaKnown RBP15.56■□□□□ 0.08
SMARCA1-201ENST00000371121 ROCK1Q13464 1354 aa15.56■□□□□ 0.08
SMARCA1-201ENST00000371121 C20orf194Q5TEA3 1177 aa15.54■□□□□ 0.08
SMARCA1-201ENST00000371121 ZNF608Q9ULD9 1512 aaPredicted RBP15.54■□□□□ 0.08
SMARCA1-201ENST00000371121 BRD4O60885 1362 aaPredicted RBP15.53■□□□□ 0.08
SMARCA1-201ENST00000371121 ZNF644Q9H582 1327 aaPredicted RBP15.53■□□□□ 0.08
SMARCA1-201ENST00000371121 WDR62O43379 1518 aa15.53■□□□□ 0.08
SMARCA1-201ENST00000371121 C8orf34Q49A92 452 aa15.53■□□□□ 0.08
SMARCA1-201ENST00000371121 UHRF1BP1Q6BDS2 1440 aa15.52■□□□□ 0.08
SMARCA1-201ENST00000371121 RALGAPBQ86X10 1494 aa15.52■□□□□ 0.07
SMARCA1-201ENST00000371121 FRAT2O75474 233 aaPredicted RBP15.51■□□□□ 0.07
SMARCA1-201ENST00000371121 TMC1Q8TDI8 760 aa15.5■□□□□ 0.07
SMARCA1-201ENST00000371121 CRBNQ96SW2 442 aa15.5■□□□□ 0.07
SMARCA1-201ENST00000371121 ARID4BQ4LE39 1312 aaPredicted RBP15.5■□□□□ 0.07
SMARCA1-201ENST00000371121 MYBBP1AQ9BQG0 1328 aaKnown RBP15.49■□□□□ 0.07
SMARCA1-201ENST00000371121 PARD3Q8TEW0 1356 aa15.49■□□□□ 0.07
SMARCA1-201ENST00000371121 CROCC2H7BZ55 1655 aa15.49■□□□□ 0.07
SMARCA1-201ENST00000371121 KIF15Q9NS87 1388 aa15.49■□□□□ 0.07
SMARCA1-201ENST00000371121 KIAA0586Q9BVV6 1533 aa15.49■□□□□ 0.07
SMARCA1-201ENST00000371121 BLMP54132 1417 aaPredicted RBP15.48■□□□□ 0.07
SMARCA1-201ENST00000371121 ADGBQ8N7X0 1667 aa15.47■□□□□ 0.07
SMARCA1-201ENST00000371121 URB2Q14146 1524 aaKnown RBP15.47■□□□□ 0.07
SMARCA1-201ENST00000371121 GAPVD1Q14C86 1478 aa15.47■□□□□ 0.07
SMARCA1-201ENST00000371121 SLC4A1APQ9BWU0 796 aaKnown RBP15.46■□□□□ 0.07
SMARCA1-201ENST00000371121 POLR3GLQ9BT43 218 aa15.46■□□□□ 0.07
SMARCA1-201ENST00000371121 RRAGDQ9NQL2 400 aaPredicted RBP15.46■□□□□ 0.06
SMARCA1-201ENST00000371121 USP19O94966 1318 aa15.45■□□□□ 0.06
SMARCA1-201ENST00000371121 KIAA1107Q9UPP5 1409 aa15.45■□□□□ 0.06
SMARCA1-201ENST00000371121 PER1O15534 1290 aaPredicted RBP15.44■□□□□ 0.06
SMARCA1-201ENST00000371121 FAM43AQ8N2R8 423 aa15.44■□□□□ 0.06
SMARCA1-201ENST00000371121 CEP170Q5SW79 1584 aa15.44■□□□□ 0.06
SMARCA1-201ENST00000371121 TDRD9Q8NDG6 1382 aaKnown RBP15.44■□□□□ 0.06
SMARCA1-201ENST00000371121 EIF5BO60841 1220 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms