RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 ERCC6L2Q5T890 1561 aa20.29■□□□□ 0.84
SEMA6C-204ENST00000368914 KIF3BO15066 747 aa20.29■□□□□ 0.84
SEMA6C-204ENST00000368914 HECW1Q76N89 1606 aa20.28■□□□□ 0.84
SEMA6C-204ENST00000368914 SPAG9O60271 1321 aaKnown RBP20.28■□□□□ 0.84
SEMA6C-204ENST00000368914 RAPGEF3O95398 923 aa20.28■□□□□ 0.84
SEMA6C-204ENST00000368914 RRBP1Q9P2E9 1410 aaKnown RBP20.27■□□□□ 0.84
SEMA6C-204ENST00000368914 NUP155O75694 1391 aa20.26■□□□□ 0.83
SEMA6C-204ENST00000368914 CHD1O14646 1710 aa20.26■□□□□ 0.83
SEMA6C-204ENST00000368914 DHX57Q6P158 1386 aaKnown RBP20.25■□□□□ 0.83
SEMA6C-204ENST00000368914 ESF1Q9H501 851 aaKnown RBP20.25■□□□□ 0.83
SEMA6C-204ENST00000368914 ANKRD30AQ9BXX3 1397 aa20.21■□□□□ 0.83
SEMA6C-204ENST00000368914 BCANQ96GW7 911 aa20.19■□□□□ 0.82
SEMA6C-204ENST00000368914 EHBP1L1Q8N3D4 1523 aa20.19■□□□□ 0.82
SEMA6C-204ENST00000368914 ARHGAP5Q13017 1502 aa20.18■□□□□ 0.82
SEMA6C-204ENST00000368914 RAPGEF6Q8TEU7 1601 aa20.18■□□□□ 0.82
SEMA6C-204ENST00000368914 DDX10Q13206 875 aaKnown RBP20.18■□□□□ 0.82
SEMA6C-204ENST00000368914 STAG3Q9UJ98 1225 aa20.17■□□□□ 0.82
SEMA6C-204ENST00000368914 SAMD9Q5K651 1589 aa20.17■□□□□ 0.82
SEMA6C-204ENST00000368914 PTPRKQ15262 1439 aa20.16■□□□□ 0.82
SEMA6C-204ENST00000368914 MAGI3Q5TCQ9 1506 aa20.16■□□□□ 0.82
SEMA6C-204ENST00000368914 DCAF11Q8TEB1 546 aa20.12■□□□□ 0.81
SEMA6C-204ENST00000368914 SUPT6HQ7KZ85 1726 aaKnown RBP20.12■□□□□ 0.81
SEMA6C-204ENST00000368914 KIF15Q9NS87 1388 aa20.12■□□□□ 0.81
SEMA6C-204ENST00000368914 NUTM2DQ5VT03 806 aaPredicted RBP20.11■□□□□ 0.81
SEMA6C-204ENST00000368914 SCAPERQ9BY12 1400 aa20.09■□□□□ 0.81
SEMA6C-204ENST00000368914 L3MBTL2Q969R5 705 aa20.08■□□□□ 0.81
SEMA6C-204ENST00000368914 GPATCH8Q9UKJ3 1502 aaKnown RBP20.08■□□□□ 0.8
SEMA6C-204ENST00000368914 RSPH4AQ5TD94 716 aa20.06■□□□□ 0.8
SEMA6C-204ENST00000368914 ASXL2Q76L83 1435 aa20.06■□□□□ 0.8
SEMA6C-204ENST00000368914 MAP3K1Q13233 1512 aa20.05■□□□□ 0.8
SEMA6C-204ENST00000368914 ABCC5O15440 1437 aa20.05■□□□□ 0.8
SEMA6C-204ENST00000368914 DAPK1P53355 1430 aa20.05■□□□□ 0.8
SEMA6C-204ENST00000368914 ANKRD50Q9ULJ7 1429 aa20.03■□□□□ 0.8
SEMA6C-204ENST00000368914 MIA2Q96PC5 1412 aa20.03■□□□□ 0.8
SEMA6C-204ENST00000368914 WASHC2CQ9Y4E1 1318 aa20.02■□□□□ 0.8
SEMA6C-204ENST00000368914 NAIPQ13075 1403 aa20.02■□□□□ 0.8
SEMA6C-204ENST00000368914 PTPN23Q9H3S7 1636 aa20.02■□□□□ 0.8
SEMA6C-204ENST00000368914 CAMSAP2Q08AD1 1489 aa20.02■□□□□ 0.79
SEMA6C-204ENST00000368914 C9orf84Q5VXU9 1444 aa20.01■□□□□ 0.79
SEMA6C-204ENST00000368914 CD109Q6YHK3 1445 aa20.01■□□□□ 0.79
SEMA6C-204ENST00000368914 KIF14Q15058 1648 aa19.98■□□□□ 0.79
SEMA6C-204ENST00000368914 PPP1R15AO75807 674 aaPredicted RBP19.97■□□□□ 0.79
SEMA6C-204ENST00000368914 MIER1Q8N108 512 aa19.96■□□□□ 0.79
SEMA6C-204ENST00000368914 ABCC2Q92887 1545 aa19.95■□□□□ 0.78
SEMA6C-204ENST00000368914 CLSPNQ9HAW4 1339 aa19.94■□□□□ 0.78
SEMA6C-204ENST00000368914 HFM1A2PYH4 1435 aa19.94■□□□□ 0.78
SEMA6C-204ENST00000368914 SENP3-EIF4A1A0A087X0R7 540 aa19.94■□□□□ 0.78
SEMA6C-204ENST00000368914 CARD11Q9BXL7 1154 aa19.93■□□□□ 0.78
SEMA6C-204ENST00000368914 CFAP43Q8NDM7 1665 aa19.93■□□□□ 0.78
SEMA6C-204ENST00000368914 PELP1Q8IZL8 1130 aaKnown RBP19.92■□□□□ 0.78
SEMA6C-204ENST00000368914 EIF4G2P78344 907 aaKnown RBP eCLIP19.92■□□□□ 0.78
SEMA6C-204ENST00000368914 KANK1Q14678 1352 aa19.9■□□□□ 0.78
SEMA6C-204ENST00000368914 NCOA1Q15788 1441 aa19.9■□□□□ 0.78
SEMA6C-204ENST00000368914 SAFB2Q14151 953 aaKnown RBP eCLIP19.89■□□□□ 0.78
SEMA6C-204ENST00000368914 FANCAO15360 1455 aa19.89■□□□□ 0.77
SEMA6C-204ENST00000368914 TRAPPC8Q9Y2L5 1435 aa19.89■□□□□ 0.77
SEMA6C-204ENST00000368914 ABCA8O94911 1581 aa19.88■□□□□ 0.77
SEMA6C-204ENST00000368914 WDR7Q9Y4E6 1490 aa19.88■□□□□ 0.77
SEMA6C-204ENST00000368914 ADGRL1O94910 1474 aa19.86■□□□□ 0.77
SEMA6C-204ENST00000368914 HSPA5P11021 654 aaKnown RBP19.84■□□□□ 0.77
SEMA6C-204ENST00000368914 PLCH2O75038 1416 aa19.84■□□□□ 0.77
SEMA6C-204ENST00000368914 SYCP2Q9BX26 1530 aa19.84■□□□□ 0.77
SEMA6C-204ENST00000368914 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.83■□□□□ 0.77
SEMA6C-204ENST00000368914 ANP32CO43423 234 aa19.82■□□□□ 0.76
SEMA6C-204ENST00000368914 CCDC141Q6ZP82 1450 aa19.82■□□□□ 0.76
SEMA6C-204ENST00000368914 PLEKHH2Q8IVE3 1493 aa19.82■□□□□ 0.76
SEMA6C-204ENST00000368914 STK26Q9P289 416 aa19.82■□□□□ 0.76
SEMA6C-204ENST00000368914 AKNAQ7Z591 1439 aa19.81■□□□□ 0.76
SEMA6C-204ENST00000368914 LRRIQ1Q96JM4 1722 aa19.79■□□□□ 0.76
SEMA6C-204ENST00000368914 CLASP1Q7Z460 1538 aa19.78■□□□□ 0.76
SEMA6C-204ENST00000368914 PLEKHG5O94827 1062 aa19.77■□□□□ 0.76
SEMA6C-204ENST00000368914 NBPF8Q3BBV2 869 aa19.77■□□□□ 0.75
SEMA6C-204ENST00000368914 CENPBP07199 599 aaPredicted RBP19.76■□□□□ 0.75
SEMA6C-204ENST00000368914 CCDC144AA2RUR9 1427 aa19.76■□□□□ 0.75
SEMA6C-204ENST00000368914 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.75■□□□□ 0.75
SEMA6C-204ENST00000368914 KDM5BQ9UGL1 1544 aa19.73■□□□□ 0.75
SEMA6C-204ENST00000368914 ROCK1Q13464 1354 aa19.72■□□□□ 0.75
SEMA6C-204ENST00000368914 ABCC10Q5T3U5 1492 aa19.72■□□□□ 0.75
SEMA6C-204ENST00000368914 FBXO31Q5XUX0 539 aaPredicted RBP19.72■□□□□ 0.75
SEMA6C-204ENST00000368914 CEBPAP49715 358 aaPredicted RBP19.71■□□□□ 0.75
SEMA6C-204ENST00000368914 TMC1Q8TDI8 760 aa19.71■□□□□ 0.75
SEMA6C-204ENST00000368914 TTC37Q6PGP7 1564 aa19.71■□□□□ 0.75
SEMA6C-204ENST00000368914 NBPF1Q3BBV0 1214 aa19.7■□□□□ 0.74
SEMA6C-204ENST00000368914 ZCCHC11Q5TAX3 1644 aaKnown RBP19.69■□□□□ 0.74
SEMA6C-204ENST00000368914 TIMELESSQ9UNS1 1208 aa19.69■□□□□ 0.74
SEMA6C-204ENST00000368914 ST20-MTHFSA0A0A6YYL1 179 aa19.69■□□□□ 0.74
SEMA6C-204ENST00000368914 TCOF1Q13428 1488 aaKnown RBP19.68■□□□□ 0.74
SEMA6C-204ENST00000368914 ROCK2O75116 1388 aaKnown RBP19.67■□□□□ 0.74
SEMA6C-204ENST00000368914 TRAK1Q9UPV9 953 aa19.67■□□□□ 0.74
SEMA6C-204ENST00000368914 SALL2Q9Y467 1007 aaPredicted RBP19.67■□□□□ 0.74
SEMA6C-204ENST00000368914 TMEM132EQ6IEE7 984 aa19.66■□□□□ 0.74
SEMA6C-204ENST00000368914 FAM9BQ8IZU0 186 aa19.66■□□□□ 0.74
SEMA6C-204ENST00000368914 ACIN1Q9UKV3 1341 aaKnown RBP19.66■□□□□ 0.74
SEMA6C-204ENST00000368914 ADCY10Q96PN6 1610 aa19.65■□□□□ 0.74
SEMA6C-204ENST00000368914 DENND4BO75064 1496 aaPredicted RBP19.64■□□□□ 0.73
SEMA6C-204ENST00000368914 KDM6BO15054 1643 aa19.63■□□□□ 0.73
SEMA6C-204ENST00000368914 KIAA1107Q9UPP5 1409 aa19.63■□□□□ 0.73
SEMA6C-204ENST00000368914 ANKRD30BQ9BXX2 1392 aa19.62■□□□□ 0.73
SEMA6C-204ENST00000368914 UHRF1BP1LA0JNW5 1464 aa19.62■□□□□ 0.73
SEMA6C-204ENST00000368914 MBD5Q9P267 1494 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms