RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PPRC1Q5VV67 1664 aaKnown RBP14.16□□□□□ -0.14
TPM3-213ENST00000368545 RUSC2Q8N2Y8 1516 aa14.15□□□□□ -0.14
TPM3-213ENST00000368545 HS6ST3Q8IZP7 471 aa14.15□□□□□ -0.14
TPM3-213ENST00000368545 UHRF1BP1LA0JNW5 1464 aa14.13□□□□□ -0.15
TPM3-213ENST00000368545 ABCC2Q92887 1545 aa14.12□□□□□ -0.15
TPM3-213ENST00000368545 MAP3K4Q9Y6R4 1608 aa14.11□□□□□ -0.15
TPM3-213ENST00000368545 SSUH2Q9Y2M2 353 aa14.08□□□□□ -0.16
TPM3-213ENST00000368545 DISP3Q9P2K9 1392 aa14.08□□□□□ -0.16
TPM3-213ENST00000368545 FAM9AQ8IZU1 332 aaPredicted RBP14.07□□□□□ -0.16
TPM3-213ENST00000368545 ASXL2Q76L83 1435 aa14.05□□□□□ -0.16
TPM3-213ENST00000368545 RNF25Q96BH1 459 aaPredicted RBP14.05□□□□□ -0.16
TPM3-213ENST00000368545 RNF39Q9H2S5 420 aa14.05□□□□□ -0.16
TPM3-213ENST00000368545 ARXQ96QS3 562 aa14.04□□□□□ -0.16
TPM3-213ENST00000368545 NKX1-1Q15270 411 aaPredicted RBP14.03□□□□□ -0.16
TPM3-213ENST00000368545 SPATA31D1Q6ZQQ2 1576 aa14.03□□□□□ -0.16
TPM3-213ENST00000368545 CARMIL2Q6F5E8 1435 aa14.03□□□□□ -0.16
TPM3-213ENST00000368545 PCF11O94913 1555 aaKnown RBP14.02□□□□□ -0.16
TPM3-213ENST00000368545 PTPRGP23470 1445 aa14.02□□□□□ -0.16
TPM3-213ENST00000368545 SPDYE2BA6NHP3 402 aa14.02□□□□□ -0.16
TPM3-213ENST00000368545 SPDYE6P0CI01 402 aa14.02□□□□□ -0.16
TPM3-213ENST00000368545 SPDYE2Q495Y8 402 aa14.02□□□□□ -0.16
TPM3-213ENST00000368545 LOC105371045A0A1W2PR82 267 aa14.02□□□□□ -0.17
TPM3-213ENST00000368545 EPRSP07814 1512 aaKnown RBP14.01□□□□□ -0.17
TPM3-213ENST00000368545 PHLDB1Q86UU1 1377 aa14.01□□□□□ -0.17
TPM3-213ENST00000368545 ZBTB47Q9UFB7 747 aaPredicted RBP14□□□□□ -0.17
TPM3-213ENST00000368545 MAGI3Q5TCQ9 1506 aa14□□□□□ -0.17
TPM3-213ENST00000368545 TNIKQ9UKE5 1360 aa14□□□□□ -0.17
TPM3-213ENST00000368545 CERKQ8TCT0 537 aa14□□□□□ -0.17
TPM3-213ENST00000368545 KIF21BO75037 1637 aa13.98□□□□□ -0.17
TPM3-213ENST00000368545 COL17A1Q9UMD9 1497 aaPredicted RBP13.98□□□□□ -0.17
TPM3-213ENST00000368545 ADAMTSL3P82987 1691 aa13.98□□□□□ -0.17
TPM3-213ENST00000368545 PTPRMP28827 1452 aa13.97□□□□□ -0.17
TPM3-213ENST00000368545 GTPBP6O43824 516 aaPredicted RBP13.96□□□□□ -0.17
TPM3-213ENST00000368545 TMEM132AQ24JP5 1023 aa13.96□□□□□ -0.17
TPM3-213ENST00000368545 KIF27Q86VH2 1401 aa13.96□□□□□ -0.18
TPM3-213ENST00000368545 CFAP43Q8NDM7 1665 aa13.96□□□□□ -0.18
TPM3-213ENST00000368545 PLEKHG5O94827 1062 aa13.96□□□□□ -0.18
TPM3-213ENST00000368545 DAXXQ9UER7 740 aaPredicted RBP13.96□□□□□ -0.18
TPM3-213ENST00000368545 KDM5BQ9UGL1 1544 aa13.96□□□□□ -0.18
TPM3-213ENST00000368545 ILDR2Q71H61 639 aa13.95□□□□□ -0.18
TPM3-213ENST00000368545 ERICH6Q7L0X2 663 aa13.94□□□□□ -0.18
TPM3-213ENST00000368545 IQSEC2Q5JU85 1478 aa13.94□□□□□ -0.18
TPM3-213ENST00000368545 UACAQ9BZF9 1416 aa13.93□□□□□ -0.18
TPM3-213ENST00000368545 GOLGA3Q08378 1498 aa13.93□□□□□ -0.18
TPM3-213ENST00000368545 CUL7Q14999 1698 aa13.93□□□□□ -0.18
TPM3-213ENST00000368545 ARAP3Q8WWN8 1544 aa13.91□□□□□ -0.18
TPM3-213ENST00000368545 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
TPM3-213ENST00000368545 PRXQ9BXM0 1461 aa13.86□□□□□ -0.19
TPM3-213ENST00000368545 WDR7Q9Y4E6 1490 aa13.86□□□□□ -0.19
TPM3-213ENST00000368545 GSE1Q14687 1217 aa13.84□□□□□ -0.19
TPM3-213ENST00000368545 BCORL1Q5H9F3 1711 aa13.84□□□□□ -0.19
TPM3-213ENST00000368545 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
TPM3-213ENST00000368545 CD109Q6YHK3 1445 aa13.82□□□□□ -0.2
TPM3-213ENST00000368545 ZCCHC11Q5TAX3 1644 aaKnown RBP13.82□□□□□ -0.2
TPM3-213ENST00000368545 RAPGEF2Q9Y4G8 1499 aa13.82□□□□□ -0.2
TPM3-213ENST00000368545 STK25O00506 426 aa13.8□□□□□ -0.2
TPM3-213ENST00000368545 POGZQ7Z3K3 1410 aa13.8□□□□□ -0.2
TPM3-213ENST00000368545 C14orf37Q86TY3 774 aa13.79□□□□□ -0.2
TPM3-213ENST00000368545 DSG3P32926 999 aa13.79□□□□□ -0.2
TPM3-213ENST00000368545 IGF1RP08069 1367 aa13.79□□□□□ -0.2
TPM3-213ENST00000368545 UBTFP17480 764 aaKnown RBP13.78□□□□□ -0.2
TPM3-213ENST00000368545 CEP162Q5TB80 1403 aa13.78□□□□□ -0.2
TPM3-213ENST00000368545 NUBP1P53384 320 aa13.78□□□□□ -0.2
TPM3-213ENST00000368545 IQGAP2Q13576 1575 aa13.76□□□□□ -0.21
TPM3-213ENST00000368545 NEO1Q92859 1461 aa13.74□□□□□ -0.21
TPM3-213ENST00000368545 MADDQ8WXG6 1647 aa13.74□□□□□ -0.21
TPM3-213ENST00000368545 CARMIL1Q5VZK9 1371 aa13.74□□□□□ -0.21
TPM3-213ENST00000368545 HOMEZQ8IX15 550 aa13.73□□□□□ -0.21
TPM3-213ENST00000368545 DCAF8Q5TAQ9 597 aa13.73□□□□□ -0.21
TPM3-213ENST00000368545 PTPRTO14522 1441 aa13.73□□□□□ -0.21
TPM3-213ENST00000368545 UGGT2Q9NYU1 1516 aa13.71□□□□□ -0.21
TPM3-213ENST00000368545 YEATS2Q9ULM3 1422 aa13.71□□□□□ -0.22
TPM3-213ENST00000368545 VGFO15240 615 aaPredicted RBP13.7□□□□□ -0.22
TPM3-213ENST00000368545 FANCAO15360 1455 aa13.69□□□□□ -0.22
TPM3-213ENST00000368545 RIMS1Q86UR5 1692 aaKnown RBP13.68□□□□□ -0.22
TPM3-213ENST00000368545 CLIP1P30622 1438 aa13.67□□□□□ -0.22
TPM3-213ENST00000368545 PREX1Q8TCU6 1659 aa13.67□□□□□ -0.22
TPM3-213ENST00000368545 P3H3Q8IVL6 736 aa13.67□□□□□ -0.22
TPM3-213ENST00000368545 ARHGEF40Q8TER5 1519 aa13.66□□□□□ -0.22
TPM3-213ENST00000368545 DISP1Q96F81 1524 aa13.66□□□□□ -0.22
TPM3-213ENST00000368545 CTTNBP2Q8WZ74 1663 aa13.66□□□□□ -0.22
TPM3-213ENST00000368545 BCL11BQ9C0K0 894 aaPredicted RBP13.65□□□□□ -0.22
TPM3-213ENST00000368545 TTC37Q6PGP7 1564 aa13.65□□□□□ -0.22
TPM3-213ENST00000368545 LMOD2Q6P5Q4 547 aa13.64□□□□□ -0.23
TPM3-213ENST00000368545 STK24Q9Y6E0 443 aa13.64□□□□□ -0.23
TPM3-213ENST00000368545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.64□□□□□ -0.23
TPM3-213ENST00000368545 AKNAQ7Z591 1439 aa13.63□□□□□ -0.23
TPM3-213ENST00000368545 MAGI2Q86UL8 1455 aa13.62□□□□□ -0.23
TPM3-213ENST00000368545 KIAA0556O60303 1618 aa13.62□□□□□ -0.23
TPM3-213ENST00000368545 ABCA9Q8IUA7 1624 aa13.62□□□□□ -0.23
TPM3-213ENST00000368545 CFAP74Q9C0B2 1584 aa13.61□□□□□ -0.23
TPM3-213ENST00000368545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.61□□□□□ -0.23
TPM3-213ENST00000368545 ZFP91Q96JP5 570 aaPredicted RBP13.61□□□□□ -0.23
TPM3-213ENST00000368545 KCNV2Q8TDN2 545 aa13.61□□□□□ -0.23
TPM3-213ENST00000368545 ARID4BQ4LE39 1312 aaPredicted RBP13.6□□□□□ -0.23
TPM3-213ENST00000368545 RYDENQ9NUL5 291 aaKnown RBP13.6□□□□□ -0.23
TPM3-213ENST00000368545 EFCAB5A4FU69 1503 aa13.6□□□□□ -0.23
TPM3-213ENST00000368545 BRPF1P55201 1214 aaPredicted RBP13.6□□□□□ -0.23
TPM3-213ENST00000368545 ABCA8O94911 1581 aa13.59□□□□□ -0.23
TPM3-213ENST00000368545 SGIP1Q9BQI5 828 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms