RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 CANXP27824 592 aaKnown RBP15.41■□□□□ 0.06
PRKN-206ENST00000366898 POLA1P09884 1462 aaPredicted RBP15.41■□□□□ 0.06
PRKN-206ENST00000366898 BIVM-ERCC5R4GMW8 1640 aa15.4■□□□□ 0.06
PRKN-206ENST00000366898 GAPVD1Q14C86 1478 aa15.38■□□□□ 0.05
PRKN-206ENST00000366898 HSPA5P11021 654 aaKnown RBP15.38■□□□□ 0.05
PRKN-206ENST00000366898 AQRO60306 1485 aaKnown RBP eCLIP15.38■□□□□ 0.05
PRKN-206ENST00000366898 GSE1Q14687 1217 aa15.38■□□□□ 0.05
PRKN-206ENST00000366898 DNTTIP2Q5QJE6 756 aaKnown RBP15.38■□□□□ 0.05
PRKN-206ENST00000366898 NCLP19338 710 aaKnown RBP15.37■□□□□ 0.05
PRKN-206ENST00000366898 TOPBP1Q92547 1522 aa15.37■□□□□ 0.05
PRKN-206ENST00000366898 LAMC3Q9Y6N6 1575 aa15.37■□□□□ 0.05
PRKN-206ENST00000366898 TSPY4P0CV99 314 aa15.36■□□□□ 0.05
PRKN-206ENST00000366898 TSPY10P0CW01 314 aa15.36■□□□□ 0.05
PRKN-206ENST00000366898 PAK3O75914 559 aaPredicted RBP15.36■□□□□ 0.05
PRKN-206ENST00000366898 MPHOSPH9Q99550 1183 aa15.36■□□□□ 0.05
PRKN-206ENST00000366898 GZF1Q9H116 711 aaPredicted RBP15.36■□□□□ 0.05
PRKN-206ENST00000366898 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
PRKN-206ENST00000366898 MRC2Q9UBG0 1479 aa15.35■□□□□ 0.05
PRKN-206ENST00000366898 PLEKHD1A6NEE1 506 aa15.35■□□□□ 0.05
PRKN-206ENST00000366898 RGL3Q3MIN7 710 aa15.35■□□□□ 0.05
PRKN-206ENST00000366898 ZMYND15Q9H091 742 aa15.35■□□□□ 0.05
PRKN-206ENST00000366898 ZNF644Q9H582 1327 aaPredicted RBP15.34■□□□□ 0.05
PRKN-206ENST00000366898 L3MBTL2Q969R5 705 aa15.33■□□□□ 0.05
PRKN-206ENST00000366898 TIAM1Q13009 1591 aa15.33■□□□□ 0.05
PRKN-206ENST00000366898 L1TD1Q5T7N2 865 aaKnown RBP15.33■□□□□ 0.04
PRKN-206ENST00000366898 FGD6Q6ZV73 1430 aa15.33■□□□□ 0.04
PRKN-206ENST00000366898 ZBTB7CA1YPR0 619 aa15.32■□□□□ 0.04
PRKN-206ENST00000366898 BECN1Q14457 450 aa15.32■□□□□ 0.04
PRKN-206ENST00000366898 CCDC18Q5T9S5 1454 aa15.31■□□□□ 0.04
PRKN-206ENST00000366898 SLC4A3P48751 1232 aa15.3■□□□□ 0.04
PRKN-206ENST00000366898 TMC1Q8TDI8 760 aa15.3■□□□□ 0.04
PRKN-206ENST00000366898 USP35Q9P2H5 1018 aa15.29■□□□□ 0.04
PRKN-206ENST00000366898 RGS3P49796 1198 aa15.29■□□□□ 0.04
PRKN-206ENST00000366898 CASKIN1Q8WXD9 1431 aa15.29■□□□□ 0.04
PRKN-206ENST00000366898 PCF11O94913 1555 aaKnown RBP15.27■□□□□ 0.03
PRKN-206ENST00000366898 PTMAP06454 111 aaKnown RBP15.25■□□□□ 0.03
PRKN-206ENST00000366898 PKD2Q13563 968 aa15.25■□□□□ 0.03
PRKN-206ENST00000366898 NCOA2Q15596 1464 aa15.25■□□□□ 0.03
PRKN-206ENST00000366898 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
PRKN-206ENST00000366898 SPRYD3Q8NCJ5 442 aa15.24■□□□□ 0.03
PRKN-206ENST00000366898 WDR97A6NE52 1622 aa15.24■□□□□ 0.03
PRKN-206ENST00000366898 SLKQ9H2G2 1235 aaPredicted RBP15.24■□□□□ 0.03
PRKN-206ENST00000366898 DNMBPQ6XZF7 1577 aa15.23■□□□□ 0.03
PRKN-206ENST00000366898 MYOM3Q5VTT5 1437 aa15.23■□□□□ 0.03
PRKN-206ENST00000366898 MSNP26038 577 aaKnown RBP15.22■□□□□ 0.03
PRKN-206ENST00000366898 PDE4CQ08493 712 aa15.22■□□□□ 0.03
PRKN-206ENST00000366898 SENP3Q9H4L4 574 aaPredicted RBP15.22■□□□□ 0.03
PRKN-206ENST00000366898 FYCO1Q9BQS8 1478 aa15.22■□□□□ 0.03
PRKN-206ENST00000366898 CARD11Q9BXL7 1154 aa15.22■□□□□ 0.03
PRKN-206ENST00000366898 ABCA10Q8WWZ4 1543 aa15.21■□□□□ 0.03
PRKN-206ENST00000366898 CCER2I3L3R5 266 aa15.2■□□□□ 0.02
PRKN-206ENST00000366898 JPH4Q96JJ6 628 aa15.2■□□□□ 0.02
PRKN-206ENST00000366898 DCAF11Q8TEB1 546 aa15.19■□□□□ 0.02
PRKN-206ENST00000366898 URB2Q14146 1524 aaKnown RBP15.19■□□□□ 0.02
PRKN-206ENST00000366898 HNRNPMP52272 730 aaKnown RBP eCLIP15.19■□□□□ 0.02
PRKN-206ENST00000366898 CYB5RLQ6IPT4 315 aa15.17■□□□□ 0.02
PRKN-206ENST00000366898 FAM13BQ9NYF5 915 aa15.17■□□□□ 0.02
PRKN-206ENST00000366898 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
PRKN-206ENST00000366898 FRAT1Q92837 279 aaPredicted RBP15.16■□□□□ 0.02
PRKN-206ENST00000366898 GOLGA6L3A6NEY3 463 aa15.16■□□□□ 0.02
PRKN-206ENST00000366898 UACAQ9BZF9 1416 aa15.16■□□□□ 0.02
PRKN-206ENST00000366898 CHGAP10645 457 aaKnown RBP15.16■□□□□ 0.02
PRKN-206ENST00000366898 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.16■□□□□ 0.02
PRKN-206ENST00000366898 DNAJC5Q9H3Z4 198 aa15.14■□□□□ 0.01
PRKN-206ENST00000366898 MYH16Q9H6N6 1097 aa15.14■□□□□ 0.01
PRKN-206ENST00000366898 NUP155O75694 1391 aa15.13■□□□□ 0.01
PRKN-206ENST00000366898 CDK13Q14004 1512 aaKnown RBP15.13■□□□□ 0.01
PRKN-206ENST00000366898 MAPKBP1O60336 1514 aa15.12■□□□□ 0.01
PRKN-206ENST00000366898 PTPRKQ15262 1439 aa15.12■□□□□ 0.01
PRKN-206ENST00000366898 EFCAB5A4FU69 1503 aa15.12■□□□□ 0.01
PRKN-206ENST00000366898 TPRNQ4KMQ1 711 aa15.11■□□□□ 0.01
PRKN-206ENST00000366898 WASHC2AQ641Q2 1341 aa15.11■□□□□ 0.01
PRKN-206ENST00000366898 GOLGA6L22H0YM25 854 aa15.1■□□□□ 0.01
PRKN-206ENST00000366898 TNNT3P45378 269 aaPredicted RBP15.1■□□□□ 0.01
PRKN-206ENST00000366898 PRDM2Q13029 1718 aa15.1■□□□□ 0.01
PRKN-206ENST00000366898 NAIPQ13075 1403 aa15.1■□□□□ 0.01
PRKN-206ENST00000366898 NFKBIBQ15653 356 aa15.09■□□□□ 0.01
PRKN-206ENST00000366898 TCERG1O14776 1098 aaKnown RBP15.09■□□□□ 0.01
PRKN-206ENST00000366898 IFT140Q96RY7 1462 aa15.09■□□□□ 0.01
PRKN-206ENST00000366898 HFM1A2PYH4 1435 aa15.08■□□□□ 0
PRKN-206ENST00000366898 KIF21AQ7Z4S6 1674 aa15.08■□□□□ 0
PRKN-206ENST00000366898 PLCB2Q00722 1185 aa15.08■□□□□ 0
PRKN-206ENST00000366898 NBPF8Q3BBV2 869 aa15.08■□□□□ 0
PRKN-206ENST00000366898 CCDC184Q52MB2 194 aa15.08■□□□□ 0
PRKN-206ENST00000366898 CARMIL2Q6F5E8 1435 aa15.07■□□□□ 0
PRKN-206ENST00000366898 PDE4AP27815 886 aa15.07■□□□□ 0
PRKN-206ENST00000366898 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
PRKN-206ENST00000366898 CC2D1BQ5T0F9 858 aaKnown RBP15.06■□□□□ 0
PRKN-206ENST00000366898 GRIN2BQ13224 1484 aa15.05■□□□□ 0
PRKN-206ENST00000366898 PRG4Q92954 1404 aaPredicted RBP15.05■□□□□ -0
PRKN-206ENST00000366898 FAM43AQ8N2R8 423 aa15.05■□□□□ -0
PRKN-206ENST00000366898 PRKRIP1Q9H875 184 aaPredicted RBP15.04■□□□□ -0
PRKN-206ENST00000366898 ZNF608Q9ULD9 1512 aaPredicted RBP15.04■□□□□ -0
PRKN-206ENST00000366898 ANKRD30AQ9BXX3 1397 aa15.04■□□□□ -0
PRKN-206ENST00000366898 MAP3K1Q13233 1512 aa15.04■□□□□ -0
PRKN-206ENST00000366898 RRP9O43818 475 aaKnown RBP15.03■□□□□ -0
PRKN-206ENST00000366898 RBM10P98175 930 aaKnown RBP15.03■□□□□ -0
PRKN-206ENST00000366898 C11orf95C9JLR9 678 aaPredicted RBP15.02■□□□□ -0
PRKN-206ENST00000366898 ST20-MTHFSA0A0A6YYL1 179 aa15.02□□□□□ -0.01
PRKN-206ENST00000366898 EPRSP07814 1512 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms