RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 B4GALNT3Q6L9W6 998 aa18.79■□□□□ 0.6
PRKN-205ENST00000366897 ARID3CA6NKF2 412 aa18.79■□□□□ 0.6
PRKN-205ENST00000366897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
PRKN-205ENST00000366897 PTPN23Q9H3S7 1636 aa18.78■□□□□ 0.6
PRKN-205ENST00000366897 SENP3-EIF4A1A0A087X0R7 540 aa18.78■□□□□ 0.6
PRKN-205ENST00000366897 C11orf95C9JLR9 678 aaPredicted RBP18.78■□□□□ 0.6
PRKN-205ENST00000366897 KDM5BQ9UGL1 1544 aa18.76■□□□□ 0.59
PRKN-205ENST00000366897 FANCIQ9NVI1 1328 aa18.74■□□□□ 0.59
PRKN-205ENST00000366897 NCOA2Q15596 1464 aa18.74■□□□□ 0.59
PRKN-205ENST00000366897 EIF4G2P78344 907 aaKnown RBP eCLIP18.73■□□□□ 0.596e-6■■■■□ 25.1
PRKN-205ENST00000366897 FMN1Q68DA7 1419 aa18.73■□□□□ 0.59
PRKN-205ENST00000366897 MRS2Q9HD23 443 aa18.72■□□□□ 0.59
PRKN-205ENST00000366897 L3MBTL2Q969R5 705 aa18.71■□□□□ 0.59
PRKN-205ENST00000366897 MYOM3Q5VTT5 1437 aa18.71■□□□□ 0.59
PRKN-205ENST00000366897 PPP4R2Q9NY27 417 aa18.71■□□□□ 0.59
PRKN-205ENST00000366897 EFCAB5A4FU69 1503 aa18.71■□□□□ 0.59
PRKN-205ENST00000366897 IQGAP2Q13576 1575 aa18.69■□□□□ 0.58
PRKN-205ENST00000366897 PRKRIP1Q9H875 184 aaPredicted RBP18.68■□□□□ 0.58
PRKN-205ENST00000366897 DENND4BO75064 1496 aaPredicted RBP18.66■□□□□ 0.58
PRKN-205ENST00000366897 MPHOSPH9Q99550 1183 aa18.65■□□□□ 0.58
PRKN-205ENST00000366897 CNTLNQ9NXG0 1405 aa18.65■□□□□ 0.58
PRKN-205ENST00000366897 TRHP20396 242 aaPredicted RBP18.64■□□□□ 0.58
PRKN-205ENST00000366897 POLR3GLQ9BT43 218 aa18.64■□□□□ 0.58
PRKN-205ENST00000366897 LRRIQ1Q96JM4 1722 aa18.63■□□□□ 0.57
PRKN-205ENST00000366897 NBPF8Q3BBV2 869 aa18.63■□□□□ 0.57
PRKN-205ENST00000366897 KDM6BO15054 1643 aa18.62■□□□□ 0.57
PRKN-205ENST00000366897 CARMIL2Q6F5E8 1435 aa18.61■□□□□ 0.57
PRKN-205ENST00000366897 CCDC7Q96M83 1385 aa18.61■□□□□ 0.57
PRKN-205ENST00000366897 CTTNBP2Q8WZ74 1663 aa18.61■□□□□ 0.57
PRKN-205ENST00000366897 MAGI3Q5TCQ9 1506 aa18.59■□□□□ 0.57
PRKN-205ENST00000366897 DISP1Q96F81 1524 aa18.59■□□□□ 0.57
PRKN-205ENST00000366897 NBR1Q14596 966 aa18.59■□□□□ 0.57
PRKN-205ENST00000366897 PTPRGP23470 1445 aa18.58■□□□□ 0.57
PRKN-205ENST00000366897 UGGT2Q9NYU1 1516 aa18.58■□□□□ 0.56
PRKN-205ENST00000366897 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
PRKN-205ENST00000366897 KIF7Q2M1P5 1343 aa18.56■□□□□ 0.56
PRKN-205ENST00000366897 PAK3O75914 559 aaPredicted RBP18.56■□□□□ 0.56
PRKN-205ENST00000366897 SUPT6HQ7KZ85 1726 aaKnown RBP18.55■□□□□ 0.56
PRKN-205ENST00000366897 NCOA1Q15788 1441 aa18.55■□□□□ 0.56
PRKN-205ENST00000366897 ZNF326Q5BKZ1 582 aaKnown RBP18.55■□□□□ 0.56
PRKN-205ENST00000366897 AKNAQ7Z591 1439 aa18.55■□□□□ 0.56
PRKN-205ENST00000366897 ERICH6BQ5W0A0 696 aa18.54■□□□□ 0.56
PRKN-205ENST00000366897 DEKP35659 375 aaKnown RBP18.53■□□□□ 0.56
PRKN-205ENST00000366897 EHBP1L1Q8N3D4 1523 aa18.52■□□□□ 0.56
PRKN-205ENST00000366897 ADCY10Q96PN6 1610 aa18.51■□□□□ 0.55
PRKN-205ENST00000366897 KIAA0556O60303 1618 aa18.51■□□□□ 0.55
PRKN-205ENST00000366897 NPM1P06748 294 aaKnown RBP eCLIP18.5■□□□□ 0.55
PRKN-205ENST00000366897 ZNF644Q9H582 1327 aaPredicted RBP18.5■□□□□ 0.55
PRKN-205ENST00000366897 SAMD9Q5K651 1589 aa18.49■□□□□ 0.55
PRKN-205ENST00000366897 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
PRKN-205ENST00000366897 NOP58Q9Y2X3 529 aaKnown RBP18.48■□□□□ 0.55
PRKN-205ENST00000366897 CDK13Q14004 1512 aaKnown RBP18.47■□□□□ 0.55
PRKN-205ENST00000366897 HECW1Q76N89 1606 aa18.46■□□□□ 0.55
PRKN-205ENST00000366897 CCDC136Q96JN2 1154 aa18.45■□□□□ 0.54
PRKN-205ENST00000366897 ANKRD30BQ9BXX2 1392 aa18.45■□□□□ 0.54
PRKN-205ENST00000366897 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
PRKN-205ENST00000366897 GCC2Q8IWJ2 1684 aa18.42■□□□□ 0.54
PRKN-205ENST00000366897 ABCC2Q92887 1545 aa18.41■□□□□ 0.54
PRKN-205ENST00000366897 RPRD2Q5VT52 1461 aaKnown RBP18.4■□□□□ 0.54
PRKN-205ENST00000366897 UHRF1BP1LA0JNW5 1464 aa18.4■□□□□ 0.54
PRKN-205ENST00000366897 TEX14Q8IWB6 1497 aa18.4■□□□□ 0.54
PRKN-205ENST00000366897 SPATA31E1Q6ZUB1 1445 aa18.4■□□□□ 0.54
PRKN-205ENST00000366897 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
PRKN-205ENST00000366897 EPRSP07814 1512 aaKnown RBP18.39■□□□□ 0.54
PRKN-205ENST00000366897 PLB1Q6P1J6 1458 aa18.39■□□□□ 0.53
PRKN-205ENST00000366897 SALL2Q9Y467 1007 aaPredicted RBP18.38■□□□□ 0.53
PRKN-205ENST00000366897 FAM69CQ0P6D2 419 aa18.36■□□□□ 0.53
PRKN-205ENST00000366897 DHX29Q7Z478 1369 aaKnown RBP18.36■□□□□ 0.53
PRKN-205ENST00000366897 SMG6Q86US8 1419 aaKnown RBP18.36■□□□□ 0.53
PRKN-205ENST00000366897 ABCC10Q5T3U5 1492 aa18.35■□□□□ 0.53
PRKN-205ENST00000366897 NPM2Q86SE8 214 aaKnown RBP18.35■□□□□ 0.53
PRKN-205ENST00000366897 DAPK1P53355 1430 aa18.34■□□□□ 0.53
PRKN-205ENST00000366897 ANP32AP39687 249 aaKnown RBP18.33■□□□□ 0.53
PRKN-205ENST00000366897 ZNF777Q9ULD5 760 aaPredicted RBP18.33■□□□□ 0.53
PRKN-205ENST00000366897 TMC1Q8TDI8 760 aa18.33■□□□□ 0.52
PRKN-205ENST00000366897 USP47Q96K76 1375 aa18.33■□□□□ 0.52
PRKN-205ENST00000366897 ABCC5O15440 1437 aa18.33■□□□□ 0.52
PRKN-205ENST00000366897 KIF13AQ9H1H9 1805 aa18.32■□□□□ 0.52
PRKN-205ENST00000366897 MIA2Q96PC5 1412 aa18.32■□□□□ 0.52
PRKN-205ENST00000366897 ASXL2Q76L83 1435 aa18.32■□□□□ 0.52
PRKN-205ENST00000366897 ABCA8O94911 1581 aa18.31■□□□□ 0.52
PRKN-205ENST00000366897 IPO9Q96P70 1041 aaKnown RBP18.3■□□□□ 0.52
PRKN-205ENST00000366897 PNISRQ8TF01 805 aaKnown RBP18.29■□□□□ 0.52
PRKN-205ENST00000366897 DIP2BQ9P265 1576 aa18.29■□□□□ 0.52
PRKN-205ENST00000366897 PKD2Q13563 968 aa18.28■□□□□ 0.52
PRKN-205ENST00000366897 ZBTB47Q9UFB7 747 aaPredicted RBP18.28■□□□□ 0.52
PRKN-205ENST00000366897 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
PRKN-205ENST00000366897 KDM2AQ9Y2K7 1162 aa18.28■□□□□ 0.52
PRKN-205ENST00000366897 ZCCHC11Q5TAX3 1644 aaKnown RBP18.28■□□□□ 0.52
PRKN-205ENST00000366897 RNF123Q5XPI4 1314 aa18.27■□□□□ 0.52
PRKN-205ENST00000366897 BCORL1Q5H9F3 1711 aa18.27■□□□□ 0.51
PRKN-205ENST00000366897 EXOC6Q8TAG9 804 aa18.26■□□□□ 0.51
PRKN-205ENST00000366897 ROCK1Q13464 1354 aa18.24■□□□□ 0.51
PRKN-205ENST00000366897 RTL5Q5HYW3 569 aaPredicted RBP18.24■□□□□ 0.51
PRKN-205ENST00000366897 PZPP20742 1482 aa18.24■□□□□ 0.51
PRKN-205ENST00000366897 SKAP1Q86WV1 359 aa18.23■□□□□ 0.51
PRKN-205ENST00000366897 CARD11Q9BXL7 1154 aa18.23■□□□□ 0.51
PRKN-205ENST00000366897 CFDP1Q9UEE9 299 aaPredicted RBP18.22■□□□□ 0.51
PRKN-205ENST00000366897 LAS1LQ9Y4W2 734 aaKnown RBP18.22■□□□□ 0.51
PRKN-205ENST00000366897 ST20-MTHFSA0A0A6YYL1 179 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms