RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 HSPA5P11021 654 aaKnown RBP18.39■□□□□ 0.54
CTR9-201ENST00000361367 TNNT2P45379 298 aaPredicted RBP18.39■□□□□ 0.53
CTR9-201ENST00000361367 TOP2BQ02880 1626 aa18.39■□□□□ 0.53
CTR9-201ENST00000361367 CC2D1BQ5T0F9 858 aaKnown RBP18.38■□□□□ 0.53
CTR9-201ENST00000361367 CCDC136Q96JN2 1154 aa18.37■□□□□ 0.53
CTR9-201ENST00000361367 L3MBTL2Q969R5 705 aa18.36■□□□□ 0.53
CTR9-201ENST00000361367 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
CTR9-201ENST00000361367 KIF21BO75037 1637 aa18.35■□□□□ 0.53
CTR9-201ENST00000361367 ERICH3Q5RHP9 1530 aa18.35■□□□□ 0.53
CTR9-201ENST00000361367 DNMBPQ6XZF7 1577 aa18.34■□□□□ 0.53
CTR9-201ENST00000361367 ROCK2O75116 1388 aaKnown RBP18.33■□□□□ 0.53
CTR9-201ENST00000361367 PRG4Q92954 1404 aaPredicted RBP18.33■□□□□ 0.52
CTR9-201ENST00000361367 NPM2Q86SE8 214 aaKnown RBP18.33■□□□□ 0.52
CTR9-201ENST00000361367 FAM69CQ0P6D2 419 aa18.33■□□□□ 0.52
CTR9-201ENST00000361367 NEUROD2Q15784 382 aa18.32■□□□□ 0.52
CTR9-201ENST00000361367 PRXQ9BXM0 1461 aa18.32■□□□□ 0.52
CTR9-201ENST00000361367 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
CTR9-201ENST00000361367 ZNF644Q9H582 1327 aaPredicted RBP18.31■□□□□ 0.52
CTR9-201ENST00000361367 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
CTR9-201ENST00000361367 IRX6P78412 446 aaPredicted RBP18.3■□□□□ 0.52
CTR9-201ENST00000361367 CASKIN1Q8WXD9 1431 aa18.3■□□□□ 0.52
CTR9-201ENST00000361367 MYOM3Q5VTT5 1437 aa18.3■□□□□ 0.52
CTR9-201ENST00000361367 SNAPC4Q5SXM2 1469 aa18.29■□□□□ 0.52
CTR9-201ENST00000361367 ANP32AP39687 249 aaKnown RBP18.28■□□□□ 0.52
CTR9-201ENST00000361367 U2SURPO15042 1029 aaKnown RBP18.27■□□□□ 0.52
CTR9-201ENST00000361367 FGD6Q6ZV73 1430 aa18.27■□□□□ 0.52
CTR9-201ENST00000361367 ARAP1Q96P48 1450 aa18.27■□□□□ 0.52
CTR9-201ENST00000361367 NUTM2DQ5VT03 806 aaPredicted RBP18.27■□□□□ 0.51
CTR9-201ENST00000361367 PRDM2Q13029 1718 aa18.26■□□□□ 0.51
CTR9-201ENST00000361367 SOX12O15370 315 aa18.25■□□□□ 0.51
CTR9-201ENST00000361367 EID1Q9Y6B2 187 aa18.25■□□□□ 0.51
CTR9-201ENST00000361367 LRRC9Q6ZRR7 1453 aa18.25■□□□□ 0.51
CTR9-201ENST00000361367 PHLDB1Q86UU1 1377 aa18.25■□□□□ 0.51
CTR9-201ENST00000361367 MORC1Q86VD1 984 aa18.25■□□□□ 0.51
CTR9-201ENST00000361367 CCDC144AA2RUR9 1427 aa18.24■□□□□ 0.51
CTR9-201ENST00000361367 DHX57Q6P158 1386 aaKnown RBP18.23■□□□□ 0.51
CTR9-201ENST00000361367 PEG3Q9GZU2 1588 aa18.23■□□□□ 0.51
CTR9-201ENST00000361367 SYNJ2O15056 1496 aa18.22■□□□□ 0.51
CTR9-201ENST00000361367 HDGFL2Q7Z4V5 671 aaPredicted RBP18.22■□□□□ 0.51
CTR9-201ENST00000361367 UPF2Q9HAU5 1272 aaKnown RBP18.22■□□□□ 0.51
CTR9-201ENST00000361367 ABCA10Q8WWZ4 1543 aa18.21■□□□□ 0.51
CTR9-201ENST00000361367 UNC13AQ9UPW8 1703 aa18.21■□□□□ 0.51
CTR9-201ENST00000361367 MYH16Q9H6N6 1097 aa18.21■□□□□ 0.51
CTR9-201ENST00000361367 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
CTR9-201ENST00000361367 NCOA2Q15596 1464 aa18.2■□□□□ 0.5
CTR9-201ENST00000361367 EIF3AQ14152 1382 aaKnown RBP18.19■□□□□ 0.5
CTR9-201ENST00000361367 KIF15Q9NS87 1388 aa18.19■□□□□ 0.5
CTR9-201ENST00000361367 FYCO1Q9BQS8 1478 aa18.19■□□□□ 0.5
CTR9-201ENST00000361367 MYT1Q01538 1121 aa18.17■□□□□ 0.5
CTR9-201ENST00000361367 EFCAB5A4FU69 1503 aa18.17■□□□□ 0.5
CTR9-201ENST00000361367 AFAP1Q8N556 730 aa18.16■□□□□ 0.5
CTR9-201ENST00000361367 PNNQ9H307 717 aaKnown RBP18.16■□□□□ 0.5
CTR9-201ENST00000361367 KTN1Q86UP2 1357 aaKnown RBP18.15■□□□□ 0.5
CTR9-201ENST00000361367 TRAK1Q9UPV9 953 aa18.14■□□□□ 0.49
CTR9-201ENST00000361367 KIAA0586Q9BVV6 1533 aa18.13■□□□□ 0.49
CTR9-201ENST00000361367 VGFO15240 615 aaPredicted RBP18.13■□□□□ 0.49
CTR9-201ENST00000361367 SUPT16HQ9Y5B9 1047 aaKnown RBP18.13■□□□□ 0.49
CTR9-201ENST00000361367 CCER2I3L3R5 266 aa18.13■□□□□ 0.49
CTR9-201ENST00000361367 PAK3O75914 559 aaPredicted RBP18.13■□□□□ 0.49
CTR9-201ENST00000361367 HSP90AA1P07900 732 aaKnown RBP18.12■□□□□ 0.49
CTR9-201ENST00000361367 ARXQ96QS3 562 aa18.11■□□□□ 0.49
CTR9-201ENST00000361367 UACAQ9BZF9 1416 aa18.11■□□□□ 0.49
CTR9-201ENST00000361367 ANKRD50Q9ULJ7 1429 aa18.11■□□□□ 0.49
CTR9-201ENST00000361367 FTSJ3Q8IY81 847 aaKnown RBP18.1■□□□□ 0.49
CTR9-201ENST00000361367 ST20-MTHFSA0A0A6YYL1 179 aa18.1■□□□□ 0.49
CTR9-201ENST00000361367 ARHGAP5Q13017 1502 aa18.09■□□□□ 0.49
CTR9-201ENST00000361367 TERF2IPQ9NYB0 399 aa18.09■□□□□ 0.49
CTR9-201ENST00000361367 URB2Q14146 1524 aaKnown RBP18.09■□□□□ 0.49
CTR9-201ENST00000361367 RALBP1Q15311 655 aa18.07■□□□□ 0.48
CTR9-201ENST00000361367 TROQ12816 1431 aaPredicted RBP18.07■□□□□ 0.48
CTR9-201ENST00000361367 FRAT1Q92837 279 aaPredicted RBP18.06■□□□□ 0.48
CTR9-201ENST00000361367 NUTM2FA1L443 756 aa18.05■□□□□ 0.48
CTR9-201ENST00000361367 NGDNQ8NEJ9 315 aaKnown RBP18.04■□□□□ 0.48
CTR9-201ENST00000361367 U2AF1L5P0DN76 240 aaPredicted RBP18.03■□□□□ 0.48
CTR9-201ENST00000361367 U2AF1Q01081 240 aaKnown RBP eCLIP18.03■□□□□ 0.48
CTR9-201ENST00000361367 MAGI1Q96QZ7 1491 aaPredicted RBP18.01■□□□□ 0.47
CTR9-201ENST00000361367 IQGAP2Q13576 1575 aa18■□□□□ 0.47
CTR9-201ENST00000361367 ZNF608Q9ULD9 1512 aaPredicted RBP18■□□□□ 0.47
CTR9-201ENST00000361367 EHBP1L1Q8N3D4 1523 aa17.99■□□□□ 0.47
CTR9-201ENST00000361367 GRIN2AQ12879 1464 aa17.99■□□□□ 0.47
CTR9-201ENST00000361367 MIA2Q96PC5 1412 aa17.98■□□□□ 0.47
CTR9-201ENST00000361367 RRBP1Q9P2E9 1410 aaKnown RBP17.98■□□□□ 0.47
CTR9-201ENST00000361367 RTF1Q92541 710 aaKnown RBP17.98■□□□□ 0.47
CTR9-201ENST00000361367 HECW1Q76N89 1606 aa17.98■□□□□ 0.47
CTR9-201ENST00000361367 USP47Q96K76 1375 aa17.97■□□□□ 0.47
CTR9-201ENST00000361367 CSB-PGBD3P0DP91 1061 aa17.96■□□□□ 0.47
CTR9-201ENST00000361367 NLRP13Q86W25 1043 aa17.96■□□□□ 0.46
CTR9-201ENST00000361367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.96■□□□□ 0.46
CTR9-201ENST00000361367 CUL7Q14999 1698 aa17.95■□□□□ 0.46
CTR9-201ENST00000361367 MS4A1P11836 297 aa17.95■□□□□ 0.46
CTR9-201ENST00000361367 SCAPERQ9BY12 1400 aa17.95■□□□□ 0.46
CTR9-201ENST00000361367 PLEKHH2Q8IVE3 1493 aa17.94■□□□□ 0.46
CTR9-201ENST00000361367 EVC2Q86UK5 1308 aa17.94■□□□□ 0.46
CTR9-201ENST00000361367 MINK1Q8N4C8 1332 aaPredicted RBP17.94■□□□□ 0.46
CTR9-201ENST00000361367 PANK3Q9H999 370 aa17.94■□□□□ 0.46
CTR9-201ENST00000361367 EPRSP07814 1512 aaKnown RBP17.94■□□□□ 0.46
CTR9-201ENST00000361367 STAC3Q96MF2 364 aa17.94■□□□□ 0.46
CTR9-201ENST00000361367 TIAM1Q13009 1591 aa17.94■□□□□ 0.46
CTR9-201ENST00000361367 C9orf84Q5VXU9 1444 aa17.93■□□□□ 0.46
CTR9-201ENST00000361367 CDK13Q14004 1512 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms