RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 ITGAEP38570 1179 aa33.13■■■□□ 2.89
HOXA4-201ENST00000360046 FAM69CQ0P6D2 419 aa33.13■■■□□ 2.89
HOXA4-201ENST00000360046 ZNF777Q9ULD5 760 aaPredicted RBP33.13■■■□□ 2.89
HOXA4-201ENST00000360046 ARHGAP5Q13017 1502 aa33.12■■■□□ 2.89
HOXA4-201ENST00000360046 CAMSAP2Q08AD1 1489 aa33.1■■■□□ 2.89
HOXA4-201ENST00000360046 ZNF644Q9H582 1327 aaPredicted RBP33.09■■■□□ 2.89
HOXA4-201ENST00000360046 PLCH2O75038 1416 aa33.08■■■□□ 2.89
HOXA4-201ENST00000360046 DIP2BQ9P265 1576 aa33.06■■■□□ 2.88
HOXA4-201ENST00000360046 CD109Q6YHK3 1445 aa33.05■■■□□ 2.88
HOXA4-201ENST00000360046 GLI2P10070 1586 aa33.03■■■□□ 2.88
HOXA4-201ENST00000360046 ARAP3Q8WWN8 1544 aa33.02■■■□□ 2.88
HOXA4-201ENST00000360046 SAMD9LQ8IVG5 1584 aa33.02■■■□□ 2.88
HOXA4-201ENST00000360046 EFCAB2Q5VUJ9 269 aa33.01■■■□□ 2.87
HOXA4-201ENST00000360046 DNMT1P26358 1616 aaKnown RBP32.96■■■□□ 2.87
HOXA4-201ENST00000360046 MAP3K4Q9Y6R4 1608 aa32.94■■■□□ 2.86
HOXA4-201ENST00000360046 TRHP20396 242 aaPredicted RBP32.94■■■□□ 2.86
HOXA4-201ENST00000360046 FANCAO15360 1455 aa32.93■■■□□ 2.86
HOXA4-201ENST00000360046 KIF13AQ9H1H9 1805 aa32.92■■■□□ 2.86
HOXA4-201ENST00000360046 DAPK1P53355 1430 aa32.92■■■□□ 2.86
HOXA4-201ENST00000360046 PTPRKQ15262 1439 aa32.91■■■□□ 2.86
HOXA4-201ENST00000360046 PLEKHH2Q8IVE3 1493 aa32.9■■■□□ 2.86
HOXA4-201ENST00000360046 SYCP2Q9BX26 1530 aa32.9■■■□□ 2.86
HOXA4-201ENST00000360046 ABCC5O15440 1437 aa32.88■■■□□ 2.85
HOXA4-201ENST00000360046 HNRNPMP52272 730 aaKnown RBP eCLIP32.88■■■□□ 2.85
HOXA4-201ENST00000360046 CROCC2H7BZ55 1655 aa32.87■■■□□ 2.85
HOXA4-201ENST00000360046 ABCC1P33527 1531 aa32.86■■■□□ 2.85
HOXA4-201ENST00000360046 ARHGEF5Q12774 1597 aa32.86■■■□□ 2.85
HOXA4-201ENST00000360046 TSPOAP1O95153 1857 aa32.86■■■□□ 2.85
HOXA4-201ENST00000360046 CFAP74Q9C0B2 1584 aa32.86■■■□□ 2.85
HOXA4-201ENST00000360046 KIAA1107Q9UPP5 1409 aa32.84■■■□□ 2.85
HOXA4-201ENST00000360046 MBD5Q9P267 1494 aa32.84■■■□□ 2.85
HOXA4-201ENST00000360046 CHIC2Q9UKJ5 165 aa32.82■■■□□ 2.85
HOXA4-201ENST00000360046 AKNAQ7Z591 1439 aa32.81■■■□□ 2.84
HOXA4-201ENST00000360046 CCDC141Q6ZP82 1450 aa32.81■■■□□ 2.84
HOXA4-201ENST00000360046 ARHGEF12Q9NZN5 1544 aa32.8■■■□□ 2.84
HOXA4-201ENST00000360046 ADGRL1O94910 1474 aa32.79■■■□□ 2.84
HOXA4-201ENST00000360046 ADGBQ8N7X0 1667 aa32.76■■■□□ 2.84
HOXA4-201ENST00000360046 RSPH4AQ5TD94 716 aa32.76■■■□□ 2.83
HOXA4-201ENST00000360046 NEO1Q92859 1461 aa32.76■■■□□ 2.83
HOXA4-201ENST00000360046 SHANK2Q9UPX8 1470 aa32.75■■■□□ 2.83
HOXA4-201ENST00000360046 TEX14Q8IWB6 1497 aa32.74■■■□□ 2.83
HOXA4-201ENST00000360046 SCAPERQ9BY12 1400 aa32.74■■■□□ 2.83
HOXA4-201ENST00000360046 TSPY4P0CV99 314 aa32.74■■■□□ 2.83
HOXA4-201ENST00000360046 TSPY10P0CW01 314 aa32.74■■■□□ 2.83
HOXA4-201ENST00000360046 PPRC1Q5VV67 1664 aaKnown RBP32.73■■■□□ 2.83
HOXA4-201ENST00000360046 C9orf84Q5VXU9 1444 aa32.73■■■□□ 2.83
HOXA4-201ENST00000360046 HFM1A2PYH4 1435 aa32.7■■■□□ 2.83
HOXA4-201ENST00000360046 SETD5Q9C0A6 1442 aa32.7■■■□□ 2.83
HOXA4-201ENST00000360046 ROCK1Q13464 1354 aa32.7■■■□□ 2.83
HOXA4-201ENST00000360046 RRP7BPQ9NSQ0 103 aa32.7■■■□□ 2.83
HOXA4-201ENST00000360046 TRAPPC8Q9Y2L5 1435 aa32.7■■■□□ 2.82
HOXA4-201ENST00000360046 GCC2Q8IWJ2 1684 aa32.67■■■□□ 2.82
HOXA4-201ENST00000360046 ADGRL2O95490 1459 aa32.67■■■□□ 2.82
HOXA4-201ENST00000360046 AFAP1Q8N556 730 aa32.66■■■□□ 2.82
HOXA4-201ENST00000360046 NAIPQ13075 1403 aa32.66■■■□□ 2.82
HOXA4-201ENST00000360046 MAST1Q9Y2H9 1570 aa32.65■■■□□ 2.82
HOXA4-201ENST00000360046 ANKRD30AQ9BXX3 1397 aa32.64■■■□□ 2.82
HOXA4-201ENST00000360046 RAB3GAP2Q9H2M9 1393 aa32.64■■■□□ 2.82
HOXA4-201ENST00000360046 NCOA1Q15788 1441 aa32.62■■■□□ 2.81
HOXA4-201ENST00000360046 DENND4BO75064 1496 aaPredicted RBP32.6■■■□□ 2.81
HOXA4-201ENST00000360046 MYT1LQ9UL68 1186 aa32.6■■■□□ 2.81
HOXA4-201ENST00000360046 ZNF518AQ6AHZ1 1483 aa32.58■■■□□ 2.81
HOXA4-201ENST00000360046 RAPGEF3O95398 923 aa32.58■■■□□ 2.81
HOXA4-201ENST00000360046 POGZQ7Z3K3 1410 aa32.58■■■□□ 2.81
HOXA4-201ENST00000360046 SPAG9O60271 1321 aaKnown RBP32.57■■■□□ 2.8
HOXA4-201ENST00000360046 PLXNC1O60486 1568 aa32.54■■■□□ 2.8
HOXA4-201ENST00000360046 ZFYVE16Q7Z3T8 1539 aa32.54■■■□□ 2.8
HOXA4-201ENST00000360046 KIF15Q9NS87 1388 aa32.53■■■□□ 2.8
HOXA4-201ENST00000360046 INO80Q9ULG1 1556 aaPredicted RBP32.51■■■□□ 2.8
HOXA4-201ENST00000360046 KDM6BO15054 1643 aa32.51■■■□□ 2.8
HOXA4-201ENST00000360046 ATP7AQ04656 1500 aa32.5■■■□□ 2.79
HOXA4-201ENST00000360046 KDM5CP41229 1560 aa32.5■■■□□ 2.79
HOXA4-201ENST00000360046 RTEL1-TNFRSF6BF6WH68 1400 aa32.5■■■□□ 2.79
HOXA4-201ENST00000360046 RICTORQ6R327 1708 aa32.49■■■□□ 2.79
HOXA4-201ENST00000360046 HRCP23327 699 aa32.47■■■□□ 2.79
HOXA4-201ENST00000360046 CCER1Q8TC90 406 aaPredicted RBP32.45■■■□□ 2.78
HOXA4-201ENST00000360046 ANKRD50Q9ULJ7 1429 aa32.44■■■□□ 2.78
HOXA4-201ENST00000360046 HECW2Q9P2P5 1572 aa32.44■■■□□ 2.78
HOXA4-201ENST00000360046 COL17A1Q9UMD9 1497 aaPredicted RBP32.44■■■□□ 2.78
HOXA4-201ENST00000360046 KIDINS220Q9ULH0 1771 aa32.43■■■□□ 2.78
HOXA4-201ENST00000360046 FRMPD1Q5SYB0 1578 aa32.42■■■□□ 2.78
HOXA4-201ENST00000360046 DUOX2Q9NRD8 1548 aa32.4■■■□□ 2.78
HOXA4-201ENST00000360046 MLH3Q9UHC1 1453 aa32.4■■■□□ 2.78
HOXA4-201ENST00000360046 DHX57Q6P158 1386 aaKnown RBP32.35■■■□□ 2.77
HOXA4-201ENST00000360046 ZMYM4Q5VZL5 1548 aa32.33■■■□□ 2.77
HOXA4-201ENST00000360046 TRIM52Q96A61 297 aa32.33■■■□□ 2.77
HOXA4-201ENST00000360046 ERBINQ96RT1 1412 aa32.32■■■□□ 2.76
HOXA4-201ENST00000360046 ABCA6Q8N139 1617 aa32.31■■■□□ 2.76
HOXA4-201ENST00000360046 ACIN1Q9UKV3 1341 aaKnown RBP32.3■■■□□ 2.76
HOXA4-201ENST00000360046 YEATS2Q9ULM3 1422 aa32.27■■■□□ 2.76
HOXA4-201ENST00000360046 MAGI2Q86UL8 1455 aa32.25■■■□□ 2.75
HOXA4-201ENST00000360046 DIP2CQ9Y2E4 1556 aa32.25■■■□□ 2.75
HOXA4-201ENST00000360046 DHX29Q7Z478 1369 aaKnown RBP32.23■■■□□ 2.75
HOXA4-201ENST00000360046 A2MP01023 1474 aa32.23■■■□□ 2.75
HOXA4-201ENST00000360046 EIF2AK4Q9P2K8 1649 aaKnown RBP32.2■■■□□ 2.74
HOXA4-201ENST00000360046 UNC13BO14795 1591 aa32.19■■■□□ 2.74
HOXA4-201ENST00000360046 NUP155O75694 1391 aa32.16■■■□□ 2.74
HOXA4-201ENST00000360046 KIF3BO15066 747 aa32.14■■■□□ 2.74
HOXA4-201ENST00000360046 ATP10AO60312 1499 aa32.14■■■□□ 2.74
HOXA4-201ENST00000360046 KDM5DQ9BY66 1539 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms