RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 ABCA9Q8IUA7 1624 aa20.61■□□□□ 0.89
CSNK1E-201ENST00000359867 MYO5CQ9NQX4 1742 aa20.6■□□□□ 0.89
CSNK1E-201ENST00000359867 CDC42BPBQ9Y5S2 1711 aa20.6■□□□□ 0.89
CSNK1E-201ENST00000359867 PTPN23Q9H3S7 1636 aa20.6■□□□□ 0.89
CSNK1E-201ENST00000359867 PREX2Q70Z35 1606 aa20.59■□□□□ 0.89
CSNK1E-201ENST00000359867 ITGAEP38570 1179 aa20.59■□□□□ 0.89
CSNK1E-201ENST00000359867 MIA2Q96PC5 1412 aa20.58■□□□□ 0.89
CSNK1E-201ENST00000359867 ARHGAP5Q13017 1502 aa20.57■□□□□ 0.88
CSNK1E-201ENST00000359867 DIP2BQ9P265 1576 aa20.56■□□□□ 0.88
CSNK1E-201ENST00000359867 PLCH2O75038 1416 aa20.55■□□□□ 0.88
CSNK1E-201ENST00000359867 FAM69CQ0P6D2 419 aa20.55■□□□□ 0.88
CSNK1E-201ENST00000359867 CAMSAP2Q08AD1 1489 aa20.54■□□□□ 0.88
CSNK1E-201ENST00000359867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.53■□□□□ 0.888e-8■■■■□ 24.8
CSNK1E-201ENST00000359867 TCOF1Q13428 1488 aaKnown RBP20.53■□□□□ 0.88
CSNK1E-201ENST00000359867 CD109Q6YHK3 1445 aa20.53■□□□□ 0.88
CSNK1E-201ENST00000359867 SAMD9LQ8IVG5 1584 aa20.51■□□□□ 0.87
CSNK1E-201ENST00000359867 GLI2P10070 1586 aa20.49■□□□□ 0.87
CSNK1E-201ENST00000359867 KIF13AQ9H1H9 1805 aa20.49■□□□□ 0.87
CSNK1E-201ENST00000359867 MAP3K4Q9Y6R4 1608 aa20.48■□□□□ 0.87
CSNK1E-201ENST00000359867 FANCAO15360 1455 aa20.48■□□□□ 0.87
CSNK1E-201ENST00000359867 EFCAB2Q5VUJ9 269 aa20.48■□□□□ 0.87
CSNK1E-201ENST00000359867 TSPOAP1O95153 1857 aa20.46■□□□□ 0.87
CSNK1E-201ENST00000359867 ARAP3Q8WWN8 1544 aa20.46■□□□□ 0.87
CSNK1E-201ENST00000359867 HNRNPMP52272 730 aaKnown RBP eCLIP20.46■□□□□ 0.87
CSNK1E-201ENST00000359867 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
CSNK1E-201ENST00000359867 PTPRKQ15262 1439 aa20.45■□□□□ 0.86
CSNK1E-201ENST00000359867 SYCP2Q9BX26 1530 aa20.45■□□□□ 0.86
CSNK1E-201ENST00000359867 CHIC2Q9UKJ5 165 aa20.42■□□□□ 0.86
CSNK1E-201ENST00000359867 ARHGEF12Q9NZN5 1544 aa20.42■□□□□ 0.86
CSNK1E-201ENST00000359867 DNMT1P26358 1616 aaKnown RBP20.42■□□□□ 0.86
CSNK1E-201ENST00000359867 DAPK1P53355 1430 aa20.41■□□□□ 0.86
CSNK1E-201ENST00000359867 TRHP20396 242 aaPredicted RBP20.41■□□□□ 0.86
CSNK1E-201ENST00000359867 ABCC5O15440 1437 aa20.41■□□□□ 0.86
CSNK1E-201ENST00000359867 ABCC1P33527 1531 aa20.41■□□□□ 0.86
CSNK1E-201ENST00000359867 MBD5Q9P267 1494 aa20.4■□□□□ 0.86
CSNK1E-201ENST00000359867 DHX57Q6P158 1386 aaKnown RBP20.39■□□□□ 0.86
CSNK1E-201ENST00000359867 PPRC1Q5VV67 1664 aaKnown RBP20.39■□□□□ 0.85
CSNK1E-201ENST00000359867 ADGRL1O94910 1474 aa20.38■□□□□ 0.85
CSNK1E-201ENST00000359867 AKNAQ7Z591 1439 aa20.38■□□□□ 0.85
CSNK1E-201ENST00000359867 PLEKHH2Q8IVE3 1493 aa20.37■□□□□ 0.85
CSNK1E-201ENST00000359867 SETD5Q9C0A6 1442 aa20.36■□□□□ 0.85
CSNK1E-201ENST00000359867 KIAA1107Q9UPP5 1409 aa20.36■□□□□ 0.85
CSNK1E-201ENST00000359867 SCAPERQ9BY12 1400 aa20.36■□□□□ 0.85
CSNK1E-201ENST00000359867 TRAPPC8Q9Y2L5 1435 aa20.36■□□□□ 0.85
CSNK1E-201ENST00000359867 ARHGEF5Q12774 1597 aa20.35■□□□□ 0.85
CSNK1E-201ENST00000359867 CFAP74Q9C0B2 1584 aa20.35■□□□□ 0.85
CSNK1E-201ENST00000359867 CROCC2H7BZ55 1655 aa20.35■□□□□ 0.85
CSNK1E-201ENST00000359867 CCDC141Q6ZP82 1450 aa20.35■□□□□ 0.85
CSNK1E-201ENST00000359867 AFAP1Q8N556 730 aa20.33■□□□□ 0.85
CSNK1E-201ENST00000359867 RAB3GAP2Q9H2M9 1393 aa20.33■□□□□ 0.85
CSNK1E-201ENST00000359867 NEO1Q92859 1461 aa20.33■□□□□ 0.84
CSNK1E-201ENST00000359867 NEUROD1Q13562 356 aa20.33■□□□□ 0.84
CSNK1E-201ENST00000359867 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
CSNK1E-201ENST00000359867 C9orf84Q5VXU9 1444 aa20.3■□□□□ 0.84
CSNK1E-201ENST00000359867 TSPY4P0CV99 314 aa20.3■□□□□ 0.84
CSNK1E-201ENST00000359867 TSPY10P0CW01 314 aa20.3■□□□□ 0.84
CSNK1E-201ENST00000359867 DIEXFQ68CQ4 756 aaKnown RBP20.3■□□□□ 0.84
CSNK1E-201ENST00000359867 TEX14Q8IWB6 1497 aa20.3■□□□□ 0.84
CSNK1E-201ENST00000359867 ACIN1Q9UKV3 1341 aaKnown RBP20.29■□□□□ 0.84
CSNK1E-201ENST00000359867 RSPH4AQ5TD94 716 aa20.28■□□□□ 0.84
CSNK1E-201ENST00000359867 RAPGEF3O95398 923 aa20.27■□□□□ 0.84
CSNK1E-201ENST00000359867 SHANK2Q9UPX8 1470 aa20.27■□□□□ 0.84
CSNK1E-201ENST00000359867 ADGBQ8N7X0 1667 aa20.26■□□□□ 0.83
CSNK1E-201ENST00000359867 POGZQ7Z3K3 1410 aa20.25■□□□□ 0.83
CSNK1E-201ENST00000359867 NAIPQ13075 1403 aa20.25■□□□□ 0.83
CSNK1E-201ENST00000359867 HFM1A2PYH4 1435 aa20.24■□□□□ 0.83
CSNK1E-201ENST00000359867 NCOA1Q15788 1441 aa20.24■□□□□ 0.83
CSNK1E-201ENST00000359867 SPAG9O60271 1321 aaKnown RBP20.24■□□□□ 0.83
CSNK1E-201ENST00000359867 DENND4BO75064 1496 aaPredicted RBP20.24■□□□□ 0.83
CSNK1E-201ENST00000359867 ZNF518AQ6AHZ1 1483 aa20.24■□□□□ 0.83
CSNK1E-201ENST00000359867 ROCK1Q13464 1354 aa20.23■□□□□ 0.83
CSNK1E-201ENST00000359867 MYT1LQ9UL68 1186 aa20.23■□□□□ 0.83
CSNK1E-201ENST00000359867 ADGRL2O95490 1459 aa20.22■□□□□ 0.83
CSNK1E-201ENST00000359867 ANKRD30AQ9BXX3 1397 aa20.22■□□□□ 0.83
CSNK1E-201ENST00000359867 MAST1Q9Y2H9 1570 aa20.21■□□□□ 0.83
CSNK1E-201ENST00000359867 RICTORQ6R327 1708 aa20.21■□□□□ 0.83
CSNK1E-201ENST00000359867 COL17A1Q9UMD9 1497 aaPredicted RBP20.21■□□□□ 0.83
CSNK1E-201ENST00000359867 ZFYVE16Q7Z3T8 1539 aa20.21■□□□□ 0.83
CSNK1E-201ENST00000359867 GCC2Q8IWJ2 1684 aa20.2■□□□□ 0.82
CSNK1E-201ENST00000359867 KDM6BO15054 1643 aa20.2■□□□□ 0.82
CSNK1E-201ENST00000359867 KIF15Q9NS87 1388 aa20.19■□□□□ 0.82
CSNK1E-201ENST00000359867 KDM5CP41229 1560 aa20.19■□□□□ 0.82
CSNK1E-201ENST00000359867 FRMPD1Q5SYB0 1578 aa20.19■□□□□ 0.82
CSNK1E-201ENST00000359867 ATP7AQ04656 1500 aa20.19■□□□□ 0.82
CSNK1E-201ENST00000359867 INO80Q9ULG1 1556 aaPredicted RBP20.18■□□□□ 0.82
CSNK1E-201ENST00000359867 KIDINS220Q9ULH0 1771 aa20.16■□□□□ 0.82
CSNK1E-201ENST00000359867 GTF3C3Q9Y5Q9 886 aa20.15■□□□□ 0.82
CSNK1E-201ENST00000359867 PLXNC1O60486 1568 aa20.15■□□□□ 0.82
CSNK1E-201ENST00000359867 HECW2Q9P2P5 1572 aa20.15■□□□□ 0.82
CSNK1E-201ENST00000359867 RTEL1-TNFRSF6BF6WH68 1400 aa20.15■□□□□ 0.82
CSNK1E-201ENST00000359867 ANKRD50Q9ULJ7 1429 aa20.13■□□□□ 0.81
CSNK1E-201ENST00000359867 MLH3Q9UHC1 1453 aa20.12■□□□□ 0.81
CSNK1E-201ENST00000359867 ZNF316A6NFI3 1004 aaPredicted RBP20.11■□□□□ 0.81
CSNK1E-201ENST00000359867 YEATS2Q9ULM3 1422 aa20.1■□□□□ 0.81
CSNK1E-201ENST00000359867 ABCA6Q8N139 1617 aa20.1■□□□□ 0.81
CSNK1E-201ENST00000359867 CENPBP07199 599 aaPredicted RBP20.09■□□□□ 0.81
CSNK1E-201ENST00000359867 ZMYM4Q5VZL5 1548 aa20.08■□□□□ 0.81
CSNK1E-201ENST00000359867 DUOX2Q9NRD8 1548 aa20.08■□□□□ 0.8
CSNK1E-201ENST00000359867 DIP2CQ9Y2E4 1556 aa20.06■□□□□ 0.8
CSNK1E-201ENST00000359867 TRIM52Q96A61 297 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms