RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 RSPH4AQ5TD94 716 aa18.54■□□□□ 0.56
ATN1-201ENST00000356654 CUX1P39880 1505 aa18.54■□□□□ 0.56
ATN1-201ENST00000356654 PRXQ9BXM0 1461 aa18.53■□□□□ 0.56
ATN1-201ENST00000356654 STK26Q9P289 416 aa18.52■□□□□ 0.56
ATN1-201ENST00000356654 HMGXB3Q12766 1538 aa18.5■□□□□ 0.55
ATN1-201ENST00000356654 ROCK2O75116 1388 aaKnown RBP18.5■□□□□ 0.55
ATN1-201ENST00000356654 SRPK2P78362 688 aaKnown RBP18.47■□□□□ 0.55
ATN1-201ENST00000356654 POLA1P09884 1462 aaPredicted RBP18.47■□□□□ 0.55
ATN1-201ENST00000356654 LRRC9Q6ZRR7 1453 aa18.47■□□□□ 0.55
ATN1-201ENST00000356654 FGD6Q6ZV73 1430 aa18.47■□□□□ 0.55
ATN1-201ENST00000356654 TOPBP1Q92547 1522 aa18.46■□□□□ 0.55
ATN1-201ENST00000356654 NUTM2DQ5VT03 806 aaPredicted RBP18.46■□□□□ 0.55
ATN1-201ENST00000356654 TOP2BQ02880 1626 aa18.46■□□□□ 0.54
ATN1-201ENST00000356654 U2SURPO15042 1029 aaKnown RBP18.45■□□□□ 0.54
ATN1-201ENST00000356654 CYB5RLQ6IPT4 315 aa18.45■□□□□ 0.54
ATN1-201ENST00000356654 UPF2Q9HAU5 1272 aaKnown RBP18.44■□□□□ 0.54
ATN1-201ENST00000356654 ERICH3Q5RHP9 1530 aa18.43■□□□□ 0.54
ATN1-201ENST00000356654 B4GALNT3Q6L9W6 998 aa18.43■□□□□ 0.54
ATN1-201ENST00000356654 ST20-MTHFSA0A0A6YYL1 179 aa18.42■□□□□ 0.54
ATN1-201ENST00000356654 GRIN2BQ13224 1484 aa18.42■□□□□ 0.54
ATN1-201ENST00000356654 MYOM3Q5VTT5 1437 aa18.42■□□□□ 0.54
ATN1-201ENST00000356654 OSCARQ8IYS5 282 aa18.41■□□□□ 0.54
ATN1-201ENST00000356654 NUDCQ9Y266 331 aa18.41■□□□□ 0.54
ATN1-201ENST00000356654 WASHC2CQ9Y4E1 1318 aa18.41■□□□□ 0.54
ATN1-201ENST00000356654 LAS1LQ9Y4W2 734 aaKnown RBP18.41■□□□□ 0.54
ATN1-201ENST00000356654 CASKIN1Q8WXD9 1431 aa18.41■□□□□ 0.54
ATN1-201ENST00000356654 MORC1Q86VD1 984 aa18.4■□□□□ 0.54
ATN1-201ENST00000356654 SOX12O15370 315 aa18.39■□□□□ 0.53
ATN1-201ENST00000356654 LMOD2Q6P5Q4 547 aa18.39■□□□□ 0.53
ATN1-201ENST00000356654 PPP4R2Q9NY27 417 aa18.39■□□□□ 0.53
ATN1-201ENST00000356654 MAPK8IP3Q9UPT6 1336 aa18.39■□□□□ 0.53
ATN1-201ENST00000356654 FRAT1Q92837 279 aaPredicted RBP18.38■□□□□ 0.53
ATN1-201ENST00000356654 HSP90AA1P07900 732 aaKnown RBP18.37■□□□□ 0.53
ATN1-201ENST00000356654 NCOA2Q15596 1464 aa18.36■□□□□ 0.53
ATN1-201ENST00000356654 KTN1Q86UP2 1357 aaKnown RBP18.35■□□□□ 0.53
ATN1-201ENST00000356654 NBR1Q14596 966 aa18.34■□□□□ 0.53
ATN1-201ENST00000356654 CCDC144AA2RUR9 1427 aa18.32■□□□□ 0.52
ATN1-201ENST00000356654 A0A0G2JS52 829 aa18.32■□□□□ 0.52
ATN1-201ENST00000356654 HDGFP51858 240 aaKnown RBP18.32■□□□□ 0.52
ATN1-201ENST00000356654 TRAK1Q9UPV9 953 aa18.32■□□□□ 0.52
ATN1-201ENST00000356654 MRC2Q9UBG0 1479 aa18.31■□□□□ 0.52
ATN1-201ENST00000356654 RALBP1Q15311 655 aa18.3■□□□□ 0.52
ATN1-201ENST00000356654 FTSJ3Q8IY81 847 aaKnown RBP18.3■□□□□ 0.52
ATN1-201ENST00000356654 MYH16Q9H6N6 1097 aa18.29■□□□□ 0.52
ATN1-201ENST00000356654 RRBP1Q9P2E9 1410 aaKnown RBP18.29■□□□□ 0.52
ATN1-201ENST00000356654 AFAP1Q8N556 730 aa18.28■□□□□ 0.52
ATN1-201ENST00000356654 KIF15Q9NS87 1388 aa18.28■□□□□ 0.52
ATN1-201ENST00000356654 RGS3P49796 1198 aa18.28■□□□□ 0.52
ATN1-201ENST00000356654 UACAQ9BZF9 1416 aa18.27■□□□□ 0.52
ATN1-201ENST00000356654 FYCO1Q9BQS8 1478 aa18.26■□□□□ 0.51
ATN1-201ENST00000356654 PRG4Q92954 1404 aaPredicted RBP18.25■□□□□ 0.51
ATN1-201ENST00000356654 PRKRIP1Q9H875 184 aaPredicted RBP18.25■□□□□ 0.51
ATN1-201ENST00000356654 PANK3Q9H999 370 aa18.25■□□□□ 0.51
ATN1-201ENST00000356654 IFT140Q96RY7 1462 aa18.24■□□□□ 0.51
ATN1-201ENST00000356654 U2AF1L5P0DN76 240 aaPredicted RBP18.24■□□□□ 0.51
ATN1-201ENST00000356654 U2AF1Q01081 240 aaKnown RBP eCLIP18.24■□□□□ 0.51
ATN1-201ENST00000356654 PRDM2Q13029 1718 aa18.24■□□□□ 0.51
ATN1-201ENST00000356654 USP47Q96K76 1375 aa18.24■□□□□ 0.51
ATN1-201ENST00000356654 NLRP13Q86W25 1043 aa18.23■□□□□ 0.51
ATN1-201ENST00000356654 DNMBPQ6XZF7 1577 aa18.23■□□□□ 0.51
ATN1-201ENST00000356654 HAP1P54257 671 aaPredicted RBP18.23■□□□□ 0.51
ATN1-201ENST00000356654 ANKRD50Q9ULJ7 1429 aa18.23■□□□□ 0.51
ATN1-201ENST00000356654 HDGFL2Q7Z4V5 671 aaPredicted RBP18.22■□□□□ 0.51
ATN1-201ENST00000356654 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
ATN1-201ENST00000356654 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
ATN1-201ENST00000356654 PEG3Q9GZU2 1588 aa18.19■□□□□ 0.5
ATN1-201ENST00000356654 NUTM2FA1L443 756 aa18.19■□□□□ 0.5
ATN1-201ENST00000356654 RCAN3Q9UKA8 241 aa18.19■□□□□ 0.5
ATN1-201ENST00000356654 CCDC146Q8IYE0 955 aa18.18■□□□□ 0.5
ATN1-201ENST00000356654 EIF3AQ14152 1382 aaKnown RBP18.16■□□□□ 0.5
ATN1-201ENST00000356654 FAM69CQ0P6D2 419 aa18.16■□□□□ 0.5
ATN1-201ENST00000356654 UNC13AQ9UPW8 1703 aa18.15■□□□□ 0.5
ATN1-201ENST00000356654 EFCAB5A4FU69 1503 aa18.15■□□□□ 0.5
ATN1-201ENST00000356654 PNNQ9H307 717 aaKnown RBP18.14■□□□□ 0.49
ATN1-201ENST00000356654 KIF7Q2M1P5 1343 aa18.13■□□□□ 0.49
ATN1-201ENST00000356654 ARXQ96QS3 562 aa18.13■□□□□ 0.49
ATN1-201ENST00000356654 TIAM1Q13009 1591 aa18.13■□□□□ 0.49
ATN1-201ENST00000356654 PAK3O75914 559 aaPredicted RBP18.12■□□□□ 0.49
ATN1-201ENST00000356654 VGFO15240 615 aaPredicted RBP18.12■□□□□ 0.49
ATN1-201ENST00000356654 SYNJ2O15056 1496 aa18.11■□□□□ 0.49
ATN1-201ENST00000356654 TERF2IPQ9NYB0 399 aa18.11■□□□□ 0.49
ATN1-201ENST00000356654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.11■□□□□ 0.49
ATN1-201ENST00000356654 MYBBP1AQ9BQG0 1328 aaKnown RBP18.1■□□□□ 0.49
ATN1-201ENST00000356654 TROQ12816 1431 aaPredicted RBP18.1■□□□□ 0.49
ATN1-201ENST00000356654 NBPF8Q3BBV2 869 aa18.09■□□□□ 0.49
ATN1-201ENST00000356654 WASHC2AQ641Q2 1341 aa18.09■□□□□ 0.49
ATN1-201ENST00000356654 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.49
ATN1-201ENST00000356654 KIAA0586Q9BVV6 1533 aa18.08■□□□□ 0.49
ATN1-201ENST00000356654 LAMC3Q9Y6N6 1575 aa18.08■□□□□ 0.48
ATN1-201ENST00000356654 CCDC7Q96M83 1385 aa18.08■□□□□ 0.48
ATN1-201ENST00000356654 GOLGA2Q08379 1002 aa18.07■□□□□ 0.48
ATN1-201ENST00000356654 CDK13Q14004 1512 aaKnown RBP18.07■□□□□ 0.48
ATN1-201ENST00000356654 MINK1Q8N4C8 1332 aaPredicted RBP18.07■□□□□ 0.48
ATN1-201ENST00000356654 RRP7AQ9Y3A4 280 aaKnown RBP18.06■□□□□ 0.48
ATN1-201ENST00000356654 EID1Q9Y6B2 187 aa18.06■□□□□ 0.48
ATN1-201ENST00000356654 HFM1A2PYH4 1435 aa18.06■□□□□ 0.48
ATN1-201ENST00000356654 MIA2Q96PC5 1412 aa18.06■□□□□ 0.48
ATN1-201ENST00000356654 NBPF1Q3BBV0 1214 aa18.05■□□□□ 0.48
ATN1-201ENST00000356654 RBM19Q9Y4C8 960 aaKnown RBP18.05■□□□□ 0.48
ATN1-201ENST00000356654 MS4A1P11836 297 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms