RNA–Protein interactions for RNA: ENST00000350896.3

MSR1-202, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5 BASIC

Gene MSR1, Length 3,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-202ENST00000350896 PTPN23Q9H3S7 1636 aa9.06□□□□□ -0.96
MSR1-202ENST00000350896 SCAPERQ9BY12 1400 aa9.06□□□□□ -0.96
MSR1-202ENST00000350896 CCDC7Q96M83 1385 aa9.05□□□□□ -0.96
MSR1-202ENST00000350896 GCC2Q8IWJ2 1684 aa9.05□□□□□ -0.96
MSR1-202ENST00000350896 MTERF4Q7Z6M4 381 aaKnown RBP9.05□□□□□ -0.96
MSR1-202ENST00000350896 PLEKHH2Q8IVE3 1493 aa9.04□□□□□ -0.96
MSR1-202ENST00000350896 FYCO1Q9BQS8 1478 aa9.04□□□□□ -0.96
MSR1-202ENST00000350896 ROCK2O75116 1388 aaKnown RBP9.04□□□□□ -0.96
MSR1-202ENST00000350896 IRX6P78412 446 aaPredicted RBP9.04□□□□□ -0.96
MSR1-202ENST00000350896 CUX1P39880 1505 aa9.04□□□□□ -0.96
MSR1-202ENST00000350896 EFCAB5A4FU69 1503 aa9.04□□□□□ -0.96
MSR1-202ENST00000350896 EIF4G2P78344 907 aaKnown RBP eCLIP9.03□□□□□ -0.96
MSR1-202ENST00000350896 PNNQ9H307 717 aaKnown RBP9.03□□□□□ -0.96
MSR1-202ENST00000350896 KIF27Q86VH2 1401 aa9.03□□□□□ -0.96
MSR1-202ENST00000350896 LRPPRCP42704 1394 aaKnown RBP9.02□□□□□ -0.96
MSR1-202ENST00000350896 THOC2Q8NI27 1593 aaKnown RBP9.02□□□□□ -0.97
MSR1-202ENST00000350896 FMN1Q68DA7 1419 aa9.01□□□□□ -0.97
MSR1-202ENST00000350896 ATAD2BQ9ULI0 1458 aa9.01□□□□□ -0.97
MSR1-202ENST00000350896 SPATA31E1Q6ZUB1 1445 aa9.01□□□□□ -0.97
MSR1-202ENST00000350896 MRS2Q9HD23 443 aa9.01□□□□□ -0.97
MSR1-202ENST00000350896 SIN3AQ96ST3 1273 aa9□□□□□ -0.97
MSR1-202ENST00000350896 PHLDB1Q86UU1 1377 aa9□□□□□ -0.97
MSR1-202ENST00000350896 RRP1P56182 461 aaKnown RBP8.99□□□□□ -0.97
MSR1-202ENST00000350896 FGD1P98174 961 aa8.99□□□□□ -0.97
MSR1-202ENST00000350896 LAS1LQ9Y4W2 734 aaKnown RBP8.99□□□□□ -0.97
MSR1-202ENST00000350896 MYOM3Q5VTT5 1437 aa8.99□□□□□ -0.97
MSR1-202ENST00000350896 FSD2A1L4K1 749 aa8.99□□□□□ -0.97
MSR1-202ENST00000350896 AAMPQ13685 434 aa8.99□□□□□ -0.97
MSR1-202ENST00000350896 BRD4O60885 1362 aaPredicted RBP8.98□□□□□ -0.97
MSR1-202ENST00000350896 SMAP1Q8IYB5 467 aaPredicted RBP8.97□□□□□ -0.97
MSR1-202ENST00000350896 RRAGDQ9NQL2 400 aaPredicted RBP8.97□□□□□ -0.97
MSR1-202ENST00000350896 CTTNBP2Q8WZ74 1663 aa8.97□□□□□ -0.97
MSR1-202ENST00000350896 FGD6Q6ZV73 1430 aa8.96□□□□□ -0.97
MSR1-202ENST00000350896 CASKIN1Q8WXD9 1431 aa8.96□□□□□ -0.97
MSR1-202ENST00000350896 HSPA5P11021 654 aaKnown RBP8.96□□□□□ -0.97
MSR1-202ENST00000350896 UTP14CQ5TAP6 766 aaKnown RBP8.96□□□□□ -0.97
MSR1-202ENST00000350896 NESP48681 1621 aa8.96□□□□□ -0.98
MSR1-202ENST00000350896 FAM161AQ3B820 660 aa8.96□□□□□ -0.98
MSR1-202ENST00000350896 DCAF11Q8TEB1 546 aa8.96□□□□□ -0.98
MSR1-202ENST00000350896 PTMSP20962 102 aa8.96□□□□□ -0.98
MSR1-202ENST00000350896 ZNF326Q5BKZ1 582 aaKnown RBP8.96□□□□□ -0.98
MSR1-202ENST00000350896 DHX29Q7Z478 1369 aaKnown RBP8.95□□□□□ -0.98
MSR1-202ENST00000350896 PRDM4Q9UKN5 801 aa8.95□□□□□ -0.98
MSR1-202ENST00000350896 NAIPQ13075 1403 aa8.95□□□□□ -0.98
MSR1-202ENST00000350896 MRE11P49959 708 aa8.94□□□□□ -0.98
MSR1-202ENST00000350896 CENPQQ7L2Z9 268 aaPredicted RBP8.94□□□□□ -0.98
MSR1-202ENST00000350896 TCOF1Q13428 1488 aaKnown RBP8.94□□□□□ -0.98
MSR1-202ENST00000350896 EIF3AQ14152 1382 aaKnown RBP8.94□□□□□ -0.98
MSR1-202ENST00000350896 BECN1Q14457 450 aa8.94□□□□□ -0.98
MSR1-202ENST00000350896 KIF21AQ7Z4S6 1674 aa8.94□□□□□ -0.98
MSR1-202ENST00000350896 NAP1L5Q96NT1 182 aaPredicted RBP8.93□□□□□ -0.98
MSR1-202ENST00000350896 KDM2BQ8NHM5 1336 aa8.93□□□□□ -0.98
MSR1-202ENST00000350896 RPRD2Q5VT52 1461 aaKnown RBP8.92□□□□□ -0.98
MSR1-202ENST00000350896 PCF11O94913 1555 aaKnown RBP8.92□□□□□ -0.98
MSR1-202ENST00000350896 RBM10P98175 930 aaKnown RBP8.92□□□□□ -0.98
MSR1-202ENST00000350896 FGD5Q6ZNL6 1462 aa8.92□□□□□ -0.98
MSR1-202ENST00000350896 GOLGA6L3A6NEY3 463 aa8.92□□□□□ -0.98
MSR1-202ENST00000350896 PLEKHG5O94827 1062 aa8.92□□□□□ -0.98
MSR1-202ENST00000350896 E9PCH4 1651 aa8.92□□□□□ -0.98
MSR1-202ENST00000350896 PRDM2Q13029 1718 aa8.91□□□□□ -0.98
MSR1-202ENST00000350896 PNISRQ8TF01 805 aaKnown RBP8.91□□□□□ -0.98
MSR1-202ENST00000350896 ARHGEF11O15085 1522 aa8.91□□□□□ -0.98
MSR1-202ENST00000350896 HS1BP3Q53T59 392 aa8.91□□□□□ -0.98
MSR1-202ENST00000350896 GAPVD1Q14C86 1478 aa8.91□□□□□ -0.98
MSR1-202ENST00000350896 RALBP1Q15311 655 aa8.91□□□□□ -0.98
MSR1-202ENST00000350896 TAF3Q5VWG9 929 aa8.91□□□□□ -0.98
MSR1-202ENST00000350896 FAM9BQ8IZU0 186 aa8.91□□□□□ -0.98
MSR1-202ENST00000350896 RCAN3Q9UKA8 241 aa8.91□□□□□ -0.98
MSR1-202ENST00000350896 TEX14Q8IWB6 1497 aa8.9□□□□□ -0.98
MSR1-202ENST00000350896 KIF14Q15058 1648 aa8.9□□□□□ -0.99
MSR1-202ENST00000350896 PDE4CQ08493 712 aa8.89□□□□□ -0.99
MSR1-202ENST00000350896 KIF15Q9NS87 1388 aa8.89□□□□□ -0.99
MSR1-202ENST00000350896 VGFO15240 615 aaPredicted RBP8.89□□□□□ -0.99
MSR1-202ENST00000350896 CLASP1Q7Z460 1538 aa8.89□□□□□ -0.99
MSR1-202ENST00000350896 NPM2Q86SE8 214 aaKnown RBP8.89□□□□□ -0.99
MSR1-202ENST00000350896 SUPT6HQ7KZ85 1726 aaKnown RBP8.89□□□□□ -0.99
MSR1-202ENST00000350896 EHBP1L1Q8N3D4 1523 aa8.89□□□□□ -0.99
MSR1-202ENST00000350896 FRAT2O75474 233 aaPredicted RBP8.88□□□□□ -0.99
MSR1-202ENST00000350896 RANGAP1P46060 587 aaPredicted RBP8.88□□□□□ -0.99
MSR1-202ENST00000350896 MBD5Q9P267 1494 aa8.88□□□□□ -0.99
MSR1-202ENST00000350896 ESPNB1AK53 854 aa8.88□□□□□ -0.99
MSR1-202ENST00000350896 IBTKQ9P2D0 1353 aaPredicted RBP8.88□□□□□ -0.99
MSR1-202ENST00000350896 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.88□□□□□ -0.99
MSR1-202ENST00000350896 NINLQ9Y2I6 1382 aa8.88□□□□□ -0.99
MSR1-202ENST00000350896 KIF7Q2M1P5 1343 aa8.87□□□□□ -0.99
MSR1-202ENST00000350896 CCDC184Q52MB2 194 aa8.87□□□□□ -0.99
MSR1-202ENST00000350896 BLMP54132 1417 aaPredicted RBP8.87□□□□□ -0.99
MSR1-202ENST00000350896 C8orf34Q49A92 452 aa8.86□□□□□ -0.99
MSR1-202ENST00000350896 KIF20AO95235 890 aa8.86□□□□□ -0.99
MSR1-202ENST00000350896 KDM5CP41229 1560 aa8.86□□□□□ -0.99
MSR1-202ENST00000350896 XRCC6P12956 609 aaKnown RBP eCLIP8.86□□□□□ -0.99
MSR1-202ENST00000350896 UHRF1BP1Q6BDS2 1440 aa8.86□□□□□ -0.99
MSR1-202ENST00000350896 MYBBP1AQ9BQG0 1328 aaKnown RBP8.85□□□□□ -0.99
MSR1-202ENST00000350896 ROCK1Q13464 1354 aa8.85□□□□□ -0.99
MSR1-202ENST00000350896 TAF7LQ5H9L4 462 aa8.85□□□□□ -0.99
MSR1-202ENST00000350896 EXOC6Q8TAG9 804 aa8.85□□□□□ -0.99
MSR1-202ENST00000350896 DENND4BO75064 1496 aaPredicted RBP8.85□□□□□ -0.99
MSR1-202ENST00000350896 OFD1O75665 1012 aa8.85□□□□□ -0.99
MSR1-202ENST00000350896 MAPK8IP3Q9UPT6 1336 aa8.85□□□□□ -0.99
MSR1-202ENST00000350896 ANTXR1Q9H6X2 564 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms