RNA–Protein interactions for RNA: ENST00000344979.7

PDE4A-202, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best) BASIC

Gene PDE4A, Length 2,579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-202ENST00000344979 CDK11AQ9UQ88 783 aaPredicted RBP25.55■■□□□ 1.68
PDE4A-202ENST00000344979 NUP153P49790 1475 aaKnown RBP25.55■■□□□ 1.68
PDE4A-202ENST00000344979 KIAA0556O60303 1618 aa25.55■■□□□ 1.68
PDE4A-202ENST00000344979 ABCC5O15440 1437 aa25.53■■□□□ 1.68
PDE4A-202ENST00000344979 SLC4A1APQ9BWU0 796 aaKnown RBP25.53■■□□□ 1.68
PDE4A-202ENST00000344979 HNRNPUQ00839 825 aaKnown RBP eCLIP25.51■■□□□ 1.68
PDE4A-202ENST00000344979 GRIN2AQ12879 1464 aa25.51■■□□□ 1.67
PDE4A-202ENST00000344979 CHMP7Q8WUX9 453 aaPredicted RBP25.51■■□□□ 1.67
PDE4A-202ENST00000344979 ZNF777Q9ULD5 760 aaPredicted RBP25.51■■□□□ 1.67
PDE4A-202ENST00000344979 ROCK1Q13464 1354 aa25.48■■□□□ 1.67
PDE4A-202ENST00000344979 PRG4Q92954 1404 aaPredicted RBP25.48■■□□□ 1.67
PDE4A-202ENST00000344979 CFDP1Q9UEE9 299 aaPredicted RBP25.47■■□□□ 1.67
PDE4A-202ENST00000344979 RAPGEF6Q8TEU7 1601 aa25.47■■□□□ 1.67
PDE4A-202ENST00000344979 ANKRD30BQ9BXX2 1392 aa25.47■■□□□ 1.67
PDE4A-202ENST00000344979 C11orf95C9JLR9 678 aaPredicted RBP25.46■■□□□ 1.67
PDE4A-202ENST00000344979 NBPF8Q3BBV2 869 aa25.46■■□□□ 1.67
PDE4A-202ENST00000344979 EIF4G3O43432 1585 aaKnown RBP25.46■■□□□ 1.67
PDE4A-202ENST00000344979 DNMT1P26358 1616 aaKnown RBP25.44■■□□□ 1.66
PDE4A-202ENST00000344979 ERCC6Q03468 1493 aa25.42■■□□□ 1.66
PDE4A-202ENST00000344979 PLB1Q6P1J6 1458 aa25.42■■□□□ 1.66
PDE4A-202ENST00000344979 RPRD2Q5VT52 1461 aaKnown RBP25.41■■□□□ 1.66
PDE4A-202ENST00000344979 CCDC184Q52MB2 194 aa25.39■■□□□ 1.65
PDE4A-202ENST00000344979 TROQ12816 1431 aaPredicted RBP25.39■■□□□ 1.65
PDE4A-202ENST00000344979 CNTLNQ9NXG0 1405 aa25.38■■□□□ 1.65
PDE4A-202ENST00000344979 CCDC7Q96M83 1385 aa25.37■■□□□ 1.65
PDE4A-202ENST00000344979 CAMSAP2Q08AD1 1489 aa25.36■■□□□ 1.65
PDE4A-202ENST00000344979 ZNF326Q5BKZ1 582 aaKnown RBP25.35■■□□□ 1.65
PDE4A-202ENST00000344979 TEX14Q8IWB6 1497 aa25.34■■□□□ 1.65
PDE4A-202ENST00000344979 IRX6P78412 446 aaPredicted RBP25.34■■□□□ 1.65
PDE4A-202ENST00000344979 NCOA1Q15788 1441 aa25.34■■□□□ 1.65
PDE4A-202ENST00000344979 JPH4Q96JJ6 628 aa25.33■■□□□ 1.65
PDE4A-202ENST00000344979 CEP170Q5SW79 1584 aa25.32■■□□□ 1.64
PDE4A-202ENST00000344979 FAM9BQ8IZU0 186 aa25.32■■□□□ 1.64
PDE4A-202ENST00000344979 GPATCH8Q9UKJ3 1502 aaKnown RBP25.31■■□□□ 1.64
PDE4A-202ENST00000344979 MAGI1Q96QZ7 1491 aaPredicted RBP25.31■■□□□ 1.64
PDE4A-202ENST00000344979 PRKRIP1Q9H875 184 aaPredicted RBP25.31■■□□□ 1.64
PDE4A-202ENST00000344979 CNGB1Q14028 1251 aaPredicted RBP25.3■■□□□ 1.64
PDE4A-202ENST00000344979 SYNJ2O15056 1496 aa25.3■■□□□ 1.64
PDE4A-202ENST00000344979 KIF14Q15058 1648 aa25.3■■□□□ 1.64
PDE4A-202ENST00000344979 KIF7Q2M1P5 1343 aa25.29■■□□□ 1.64
PDE4A-202ENST00000344979 PZPP20742 1482 aa25.28■■□□□ 1.64
PDE4A-202ENST00000344979 POLR3GLQ9BT43 218 aa25.28■■□□□ 1.64
PDE4A-202ENST00000344979 MRS2Q9HD23 443 aa25.28■■□□□ 1.64
PDE4A-202ENST00000344979 CARMIL2Q6F5E8 1435 aa25.27■■□□□ 1.64
PDE4A-202ENST00000344979 PKD2Q13563 968 aa25.27■■□□□ 1.64
PDE4A-202ENST00000344979 PLEKHD1A6NEE1 506 aa25.24■■□□□ 1.63
PDE4A-202ENST00000344979 ANKRD30AQ9BXX3 1397 aa25.22■■□□□ 1.63
PDE4A-202ENST00000344979 ITSN2Q9NZM3 1697 aa25.22■■□□□ 1.63
PDE4A-202ENST00000344979 SPATA31E1Q6ZUB1 1445 aa25.22■■□□□ 1.63
PDE4A-202ENST00000344979 KIAA1107Q9UPP5 1409 aa25.19■■□□□ 1.62
PDE4A-202ENST00000344979 ANKRD50Q9ULJ7 1429 aa25.18■■□□□ 1.62
PDE4A-202ENST00000344979 ADGBQ8N7X0 1667 aa25.16■■□□□ 1.62
PDE4A-202ENST00000344979 RBM19Q9Y4C8 960 aaKnown RBP25.16■■□□□ 1.62
PDE4A-202ENST00000344979 NUP160Q12769 1436 aa25.15■■□□□ 1.62
PDE4A-202ENST00000344979 NUP155O75694 1391 aa25.15■■□□□ 1.62
PDE4A-202ENST00000344979 ADGRL2O95490 1459 aa25.15■■□□□ 1.62
PDE4A-202ENST00000344979 USP47Q96K76 1375 aa25.14■■□□□ 1.61
PDE4A-202ENST00000344979 ADCY10Q96PN6 1610 aa25.13■■□□□ 1.61
PDE4A-202ENST00000344979 TSPY4P0CV99 314 aa25.12■■□□□ 1.61
PDE4A-202ENST00000344979 TSPY10P0CW01 314 aa25.12■■□□□ 1.61
PDE4A-202ENST00000344979 HNRNPMP52272 730 aaKnown RBP eCLIP25.11■■□□□ 1.61
PDE4A-202ENST00000344979 ATP10BO94823 1461 aa25.11■■□□□ 1.61
PDE4A-202ENST00000344979 CROCC2H7BZ55 1655 aa25.1■■□□□ 1.61
PDE4A-202ENST00000344979 C9orf84Q5VXU9 1444 aa25.1■■□□□ 1.61
PDE4A-202ENST00000344979 KDM2AQ9Y2K7 1162 aa25.09■■□□□ 1.61
PDE4A-202ENST00000344979 MBD5Q9P267 1494 aa25.08■■□□□ 1.61
PDE4A-202ENST00000344979 ZBED9Q6R2W3 1325 aa25.06■■□□□ 1.6
PDE4A-202ENST00000344979 ABCC10Q5T3U5 1492 aa25.05■■□□□ 1.6
PDE4A-202ENST00000344979 ABCA8O94911 1581 aa25.04■■□□□ 1.6
PDE4A-202ENST00000344979 CDC42BPAQ5VT25 1732 aa25.04■■□□□ 1.6
PDE4A-202ENST00000344979 CARD11Q9BXL7 1154 aa25.04■■□□□ 1.6
PDE4A-202ENST00000344979 ANP32EQ9BTT0 268 aa25.03■■□□□ 1.6
PDE4A-202ENST00000344979 SENP3-EIF4A1A0A087X0R7 540 aa25.02■■□□□ 1.6
PDE4A-202ENST00000344979 KIF15Q9NS87 1388 aa25.02■■□□□ 1.6
PDE4A-202ENST00000344979 DHX29Q7Z478 1369 aaKnown RBP25.01■■□□□ 1.59
PDE4A-202ENST00000344979 BCORL1Q5H9F3 1711 aa25■■□□□ 1.59
PDE4A-202ENST00000344979 POLR1AO95602 1720 aaPredicted RBP25■■□□□ 1.59
PDE4A-202ENST00000344979 DCAF11Q8TEB1 546 aa25■■□□□ 1.59
PDE4A-202ENST00000344979 PTPRGP23470 1445 aa24.98■■□□□ 1.59
PDE4A-202ENST00000344979 SHANK2Q9UPX8 1470 aa24.97■■□□□ 1.59
PDE4A-202ENST00000344979 PPP4R2Q9NY27 417 aa24.96■■□□□ 1.59
PDE4A-202ENST00000344979 ST20-MTHFSA0A0A6YYL1 179 aa24.94■■□□□ 1.58
PDE4A-202ENST00000344979 KDM5CP41229 1560 aa24.94■■□□□ 1.58
PDE4A-202ENST00000344979 B4GALNT3Q6L9W6 998 aa24.93■■□□□ 1.58
PDE4A-202ENST00000344979 ERICH6BQ5W0A0 696 aa24.91■■□□□ 1.58
PDE4A-202ENST00000344979 UHRF1BP1Q6BDS2 1440 aa24.91■■□□□ 1.58
PDE4A-202ENST00000344979 RALGAPBQ86X10 1494 aa24.91■■□□□ 1.58
PDE4A-202ENST00000344979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.9■■□□□ 1.58
PDE4A-202ENST00000344979 ARID4BQ4LE39 1312 aaPredicted RBP24.89■■□□□ 1.57
PDE4A-202ENST00000344979 RGL3Q3MIN7 710 aa24.88■■□□□ 1.57
PDE4A-202ENST00000344979 TMC1Q8TDI8 760 aa24.88■■□□□ 1.57
PDE4A-202ENST00000344979 ROCK2O75116 1388 aaKnown RBP24.85■■□□□ 1.57
PDE4A-202ENST00000344979 CCDC141Q6ZP82 1450 aa24.85■■□□□ 1.57
PDE4A-202ENST00000344979 ARHGEF12Q9NZN5 1544 aa24.84■■□□□ 1.57
PDE4A-202ENST00000344979 KDM5DQ9BY66 1539 aa24.84■■□□□ 1.57
PDE4A-202ENST00000344979 SAMD9LQ8IVG5 1584 aa24.83■■□□□ 1.57
PDE4A-202ENST00000344979 ARHGEF5Q12774 1597 aa24.82■■□□□ 1.56
PDE4A-202ENST00000344979 PNISRQ8TF01 805 aaKnown RBP24.81■■□□□ 1.56
PDE4A-202ENST00000344979 FAM135AQ9P2D6 1515 aa24.81■■□□□ 1.56
PDE4A-202ENST00000344979 NUDCQ9Y266 331 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms