RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 FOXD1Q16676 465 aa29.87■■■□□ 2.37
PTDSS1-201ENST00000337004 KIAA0556O60303 1618 aa29.87■■■□□ 2.37
PTDSS1-201ENST00000337004 ANKRD30BQ9BXX2 1392 aa29.86■■■□□ 2.37
PTDSS1-201ENST00000337004 NUP153P49790 1475 aaKnown RBP29.85■■■□□ 2.37
PTDSS1-201ENST00000337004 HNRNPUQ00839 825 aaKnown RBP eCLIP29.84■■■□□ 2.37
PTDSS1-201ENST00000337004 DNMT1P26358 1616 aaKnown RBP29.82■■■□□ 2.36
PTDSS1-201ENST00000337004 RPRD2Q5VT52 1461 aaKnown RBP29.82■■■□□ 2.36
PTDSS1-201ENST00000337004 CNTLNQ9NXG0 1405 aa29.81■■■□□ 2.36
PTDSS1-201ENST00000337004 ZNF644Q9H582 1327 aaPredicted RBP29.81■■■□□ 2.36
PTDSS1-201ENST00000337004 SLC4A1APQ9BWU0 796 aaKnown RBP29.79■■■□□ 2.36
PTDSS1-201ENST00000337004 RAPGEF6Q8TEU7 1601 aa29.78■■■□□ 2.36
PTDSS1-201ENST00000337004 GRIN2AQ12879 1464 aa29.78■■■□□ 2.36
PTDSS1-201ENST00000337004 NCOA1Q15788 1441 aa29.77■■■□□ 2.36
PTDSS1-201ENST00000337004 CCDC7Q96M83 1385 aa29.75■■■□□ 2.35
PTDSS1-201ENST00000337004 NBPF8Q3BBV2 869 aa29.73■■■□□ 2.35
PTDSS1-201ENST00000337004 TROQ12816 1431 aaPredicted RBP29.72■■■□□ 2.35
PTDSS1-201ENST00000337004 TEX14Q8IWB6 1497 aa29.72■■■□□ 2.35
PTDSS1-201ENST00000337004 C11orf95C9JLR9 678 aaPredicted RBP29.71■■■□□ 2.35
PTDSS1-201ENST00000337004 CFDP1Q9UEE9 299 aaPredicted RBP29.71■■■□□ 2.35
PTDSS1-201ENST00000337004 PRKRIP1Q9H875 184 aaPredicted RBP29.68■■■□□ 2.34
PTDSS1-201ENST00000337004 PRG4Q92954 1404 aaPredicted RBP29.68■■■□□ 2.34
PTDSS1-201ENST00000337004 CHMP7Q8WUX9 453 aaPredicted RBP29.64■■■□□ 2.34
PTDSS1-201ENST00000337004 CAMSAP2Q08AD1 1489 aa29.64■■■□□ 2.34
PTDSS1-201ENST00000337004 EIF4G3O43432 1585 aaKnown RBP29.64■■■□□ 2.34
PTDSS1-201ENST00000337004 SPATA31E1Q6ZUB1 1445 aa29.63■■■□□ 2.33
PTDSS1-201ENST00000337004 MAGI1Q96QZ7 1491 aaPredicted RBP29.62■■■□□ 2.33
PTDSS1-201ENST00000337004 GPATCH8Q9UKJ3 1502 aaKnown RBP29.61■■■□□ 2.33
PTDSS1-201ENST00000337004 PZPP20742 1482 aa29.6■■■□□ 2.33
PTDSS1-201ENST00000337004 CCDC184Q52MB2 194 aa29.6■■■□□ 2.33
PTDSS1-201ENST00000337004 KIF7Q2M1P5 1343 aa29.6■■■□□ 2.33
PTDSS1-201ENST00000337004 RBM19Q9Y4C8 960 aaKnown RBP29.59■■■□□ 2.33
PTDSS1-201ENST00000337004 PLB1Q6P1J6 1458 aa29.58■■■□□ 2.33
PTDSS1-201ENST00000337004 ANP32EQ9BTT0 268 aa29.57■■■□□ 2.32
PTDSS1-201ENST00000337004 MRS2Q9HD23 443 aa29.57■■■□□ 2.32
PTDSS1-201ENST00000337004 ZNF777Q9ULD5 760 aaPredicted RBP29.57■■■□□ 2.32
PTDSS1-201ENST00000337004 ITSN2Q9NZM3 1697 aa29.57■■■□□ 2.32
PTDSS1-201ENST00000337004 CARMIL2Q6F5E8 1435 aa29.56■■■□□ 2.32
PTDSS1-201ENST00000337004 ADGRL2O95490 1459 aa29.56■■■□□ 2.32
PTDSS1-201ENST00000337004 ERICH6BQ5W0A0 696 aa29.56■■■□□ 2.32
PTDSS1-201ENST00000337004 SYNJ2O15056 1496 aa29.56■■■□□ 2.32
PTDSS1-201ENST00000337004 KIAA1107Q9UPP5 1409 aa29.55■■■□□ 2.32
PTDSS1-201ENST00000337004 ANKRD30AQ9BXX3 1397 aa29.54■■■□□ 2.32
PTDSS1-201ENST00000337004 FAM9BQ8IZU0 186 aa29.54■■■□□ 2.32
PTDSS1-201ENST00000337004 CEP170Q5SW79 1584 aa29.51■■■□□ 2.32
PTDSS1-201ENST00000337004 JPH4Q96JJ6 628 aa29.51■■■□□ 2.31
PTDSS1-201ENST00000337004 FBLN2P98095 1184 aa29.5■■■□□ 2.31
PTDSS1-201ENST00000337004 ADCY10Q96PN6 1610 aa29.5■■■□□ 2.31
PTDSS1-201ENST00000337004 ADGBQ8N7X0 1667 aa29.49■■■□□ 2.31
PTDSS1-201ENST00000337004 PKD2Q13563 968 aa29.49■■■□□ 2.31
PTDSS1-201ENST00000337004 ZBED9Q6R2W3 1325 aa29.48■■■□□ 2.31
PTDSS1-201ENST00000337004 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
PTDSS1-201ENST00000337004 IRX6P78412 446 aaPredicted RBP29.47■■■□□ 2.31
PTDSS1-201ENST00000337004 PLEKHD1A6NEE1 506 aa29.47■■■□□ 2.31
PTDSS1-201ENST00000337004 KIF14Q15058 1648 aa29.46■■■□□ 2.31
PTDSS1-201ENST00000337004 MBD5Q9P267 1494 aa29.46■■■□□ 2.31
PTDSS1-201ENST00000337004 ANKRD50Q9ULJ7 1429 aa29.45■■■□□ 2.3
PTDSS1-201ENST00000337004 NUP160Q12769 1436 aa29.43■■■□□ 2.3
PTDSS1-201ENST00000337004 USP47Q96K76 1375 aa29.41■■■□□ 2.3
PTDSS1-201ENST00000337004 POLR1AO95602 1720 aaPredicted RBP29.41■■■□□ 2.3
PTDSS1-201ENST00000337004 CROCC2H7BZ55 1655 aa29.41■■■□□ 2.3
PTDSS1-201ENST00000337004 ARID4BQ4LE39 1312 aaPredicted RBP29.4■■■□□ 2.3
PTDSS1-201ENST00000337004 PPP4R2Q9NY27 417 aa29.4■■■□□ 2.3
PTDSS1-201ENST00000337004 ZNF326Q5BKZ1 582 aaKnown RBP29.39■■■□□ 2.3
PTDSS1-201ENST00000337004 SHANK2Q9UPX8 1470 aa29.36■■■□□ 2.29
PTDSS1-201ENST00000337004 NUP155O75694 1391 aa29.36■■■□□ 2.29
PTDSS1-201ENST00000337004 TSPY4P0CV99 314 aa29.35■■■□□ 2.29
PTDSS1-201ENST00000337004 TSPY10P0CW01 314 aa29.35■■■□□ 2.29
PTDSS1-201ENST00000337004 DHX29Q7Z478 1369 aaKnown RBP29.34■■■□□ 2.29
PTDSS1-201ENST00000337004 C9orf84Q5VXU9 1444 aa29.33■■■□□ 2.29
PTDSS1-201ENST00000337004 ABCC10Q5T3U5 1492 aa29.33■■■□□ 2.29
PTDSS1-201ENST00000337004 UHRF1BP1Q6BDS2 1440 aa29.32■■■□□ 2.28
PTDSS1-201ENST00000337004 ATP10BO94823 1461 aa29.31■■■□□ 2.28
PTDSS1-201ENST00000337004 ABCA8O94911 1581 aa29.31■■■□□ 2.28
PTDSS1-201ENST00000337004 POLR3GLQ9BT43 218 aa29.3■■■□□ 2.28
PTDSS1-201ENST00000337004 ROCK2O75116 1388 aaKnown RBP29.28■■■□□ 2.28
PTDSS1-201ENST00000337004 KDM5CP41229 1560 aa29.26■■■□□ 2.27
PTDSS1-201ENST00000337004 RALGAPBQ86X10 1494 aa29.25■■■□□ 2.27
PTDSS1-201ENST00000337004 CARD11Q9BXL7 1154 aa29.25■■■□□ 2.27
PTDSS1-201ENST00000337004 CDC42BPAQ5VT25 1732 aa29.24■■■□□ 2.27
PTDSS1-201ENST00000337004 ARHGEF12Q9NZN5 1544 aa29.24■■■□□ 2.27
PTDSS1-201ENST00000337004 KDM5DQ9BY66 1539 aa29.23■■■□□ 2.27
PTDSS1-201ENST00000337004 BCORL1Q5H9F3 1711 aa29.23■■■□□ 2.27
PTDSS1-201ENST00000337004 KIF15Q9NS87 1388 aa29.21■■■□□ 2.27
PTDSS1-201ENST00000337004 FANCIQ9NVI1 1328 aa29.2■■■□□ 2.27
PTDSS1-201ENST00000337004 HNRNPMP52272 730 aaKnown RBP eCLIP29.19■■■□□ 2.26
PTDSS1-201ENST00000337004 SMG6Q86US8 1419 aaKnown RBP29.19■■■□□ 2.26
PTDSS1-201ENST00000337004 CNGB1Q14028 1251 aaPredicted RBP29.18■■■□□ 2.26
PTDSS1-201ENST00000337004 PTPRGP23470 1445 aa29.18■■■□□ 2.26
PTDSS1-201ENST00000337004 RSPH4AQ5TD94 716 aa29.16■■■□□ 2.26
PTDSS1-201ENST00000337004 KDM2AQ9Y2K7 1162 aa29.16■■■□□ 2.26
PTDSS1-201ENST00000337004 ARHGEF5Q12774 1597 aa29.15■■■□□ 2.26
PTDSS1-201ENST00000337004 DCAF11Q8TEB1 546 aa29.14■■■□□ 2.26
PTDSS1-201ENST00000337004 B4GALNT3Q6L9W6 998 aa29.13■■■□□ 2.25
PTDSS1-201ENST00000337004 NUDCQ9Y266 331 aa29.13■■■□□ 2.25
PTDSS1-201ENST00000337004 TMC1Q8TDI8 760 aa29.12■■■□□ 2.25
PTDSS1-201ENST00000337004 ST20-MTHFSA0A0A6YYL1 179 aa29.11■■■□□ 2.25
PTDSS1-201ENST00000337004 PNISRQ8TF01 805 aaKnown RBP29.11■■■□□ 2.25
PTDSS1-201ENST00000337004 CCDC141Q6ZP82 1450 aa29.09■■■□□ 2.25
PTDSS1-201ENST00000337004 KTN1Q86UP2 1357 aaKnown RBP29.08■■■□□ 2.25
PTDSS1-201ENST00000337004 MSH5O43196 834 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms