RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 KIAA0586Q9BVV6 1533 aa24.85■■□□□ 1.57
IFFO1-201ENST00000336604 NUP153P49790 1475 aaKnown RBP24.85■■□□□ 1.57
IFFO1-201ENST00000336604 KIAA0556O60303 1618 aa24.84■■□□□ 1.57
IFFO1-201ENST00000336604 ABCC5O15440 1437 aa24.83■■□□□ 1.57
IFFO1-201ENST00000336604 ROCK1Q13464 1354 aa24.81■■□□□ 1.56
IFFO1-201ENST00000336604 ANKRD30BQ9BXX2 1392 aa24.79■■□□□ 1.56
IFFO1-201ENST00000336604 HNRNPUQ00839 825 aaKnown RBP eCLIP24.79■■□□□ 1.56
IFFO1-201ENST00000336604 GRIN2AQ12879 1464 aa24.77■■□□□ 1.56
IFFO1-201ENST00000336604 C11orf95C9JLR9 678 aaPredicted RBP24.77■■□□□ 1.56
IFFO1-201ENST00000336604 DNMT1P26358 1616 aaKnown RBP24.77■■□□□ 1.56
IFFO1-201ENST00000336604 CDK11AQ9UQ88 783 aaPredicted RBP24.76■■□□□ 1.55
IFFO1-201ENST00000336604 SLC4A1APQ9BWU0 796 aaKnown RBP24.76■■□□□ 1.55
IFFO1-201ENST00000336604 RAPGEF6Q8TEU7 1601 aa24.75■■□□□ 1.55
IFFO1-201ENST00000336604 NBPF8Q3BBV2 869 aa24.75■■□□□ 1.55
IFFO1-201ENST00000336604 RPRD2Q5VT52 1461 aaKnown RBP24.75■■□□□ 1.55
IFFO1-201ENST00000336604 PRG4Q92954 1404 aaPredicted RBP24.73■■□□□ 1.55
IFFO1-201ENST00000336604 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
IFFO1-201ENST00000336604 CNTLNQ9NXG0 1405 aa24.71■■□□□ 1.55
IFFO1-201ENST00000336604 TEX14Q8IWB6 1497 aa24.7■■□□□ 1.55
IFFO1-201ENST00000336604 CCDC184Q52MB2 194 aa24.69■■□□□ 1.54
IFFO1-201ENST00000336604 NCOA1Q15788 1441 aa24.69■■□□□ 1.54
IFFO1-201ENST00000336604 CFDP1Q9UEE9 299 aaPredicted RBP24.69■■□□□ 1.54
IFFO1-201ENST00000336604 CCDC7Q96M83 1385 aa24.68■■□□□ 1.54
IFFO1-201ENST00000336604 PLB1Q6P1J6 1458 aa24.68■■□□□ 1.54
IFFO1-201ENST00000336604 TROQ12816 1431 aaPredicted RBP24.67■■□□□ 1.54
IFFO1-201ENST00000336604 CHMP7Q8WUX9 453 aaPredicted RBP24.66■■□□□ 1.54
IFFO1-201ENST00000336604 ZNF777Q9ULD5 760 aaPredicted RBP24.66■■□□□ 1.54
IFFO1-201ENST00000336604 CAMSAP2Q08AD1 1489 aa24.65■■□□□ 1.54
IFFO1-201ENST00000336604 FBLN2P98095 1184 aa24.65■■□□□ 1.54
IFFO1-201ENST00000336604 PRKRIP1Q9H875 184 aaPredicted RBP24.63■■□□□ 1.53
IFFO1-201ENST00000336604 RBM19Q9Y4C8 960 aaKnown RBP24.61■■□□□ 1.53
IFFO1-201ENST00000336604 PZPP20742 1482 aa24.61■■□□□ 1.53
IFFO1-201ENST00000336604 GPATCH8Q9UKJ3 1502 aaKnown RBP24.61■■□□□ 1.53
IFFO1-201ENST00000336604 SPATA31E1Q6ZUB1 1445 aa24.6■■□□□ 1.53
IFFO1-201ENST00000336604 CEP170Q5SW79 1584 aa24.6■■□□□ 1.53
IFFO1-201ENST00000336604 IRX6P78412 446 aaPredicted RBP24.6■■□□□ 1.53
IFFO1-201ENST00000336604 KIF7Q2M1P5 1343 aa24.6■■□□□ 1.53
IFFO1-201ENST00000336604 KIF14Q15058 1648 aa24.59■■□□□ 1.53
IFFO1-201ENST00000336604 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.52
IFFO1-201ENST00000336604 ERCC6Q03468 1493 aa24.57■■□□□ 1.52
IFFO1-201ENST00000336604 FAM9BQ8IZU0 186 aa24.57■■□□□ 1.52
IFFO1-201ENST00000336604 SYNJ2O15056 1496 aa24.56■■□□□ 1.52
IFFO1-201ENST00000336604 MRS2Q9HD23 443 aa24.55■■□□□ 1.52
IFFO1-201ENST00000336604 JPH4Q96JJ6 628 aa24.54■■□□□ 1.52
IFFO1-201ENST00000336604 ITSN2Q9NZM3 1697 aa24.53■■□□□ 1.52
IFFO1-201ENST00000336604 PKD2Q13563 968 aa24.52■■□□□ 1.52
IFFO1-201ENST00000336604 ZNF326Q5BKZ1 582 aaKnown RBP24.52■■□□□ 1.52
IFFO1-201ENST00000336604 CARMIL2Q6F5E8 1435 aa24.5■■□□□ 1.51
IFFO1-201ENST00000336604 KIAA1107Q9UPP5 1409 aa24.5■■□□□ 1.51
IFFO1-201ENST00000336604 ADGRL2O95490 1459 aa24.5■■□□□ 1.51
IFFO1-201ENST00000336604 ANKRD30AQ9BXX3 1397 aa24.49■■□□□ 1.51
IFFO1-201ENST00000336604 ADGBQ8N7X0 1667 aa24.49■■□□□ 1.51
IFFO1-201ENST00000336604 ADCY10Q96PN6 1610 aa24.48■■□□□ 1.51
IFFO1-201ENST00000336604 ANKRD50Q9ULJ7 1429 aa24.47■■□□□ 1.51
IFFO1-201ENST00000336604 MBD5Q9P267 1494 aa24.46■■□□□ 1.51
IFFO1-201ENST00000336604 NUP160Q12769 1436 aa24.45■■□□□ 1.51
IFFO1-201ENST00000336604 CROCC2H7BZ55 1655 aa24.45■■□□□ 1.5
IFFO1-201ENST00000336604 PLEKHD1A6NEE1 506 aa24.45■■□□□ 1.5
IFFO1-201ENST00000336604 CNGB1Q14028 1251 aaPredicted RBP24.44■■□□□ 1.5
IFFO1-201ENST00000336604 POLR3GLQ9BT43 218 aa24.43■■□□□ 1.5
IFFO1-201ENST00000336604 USP47Q96K76 1375 aa24.43■■□□□ 1.5
IFFO1-201ENST00000336604 POLR1AO95602 1720 aaPredicted RBP24.41■■□□□ 1.5
IFFO1-201ENST00000336604 ZBED9Q6R2W3 1325 aa24.41■■□□□ 1.5
IFFO1-201ENST00000336604 NUP155O75694 1391 aa24.4■■□□□ 1.5
IFFO1-201ENST00000336604 ATP10BO94823 1461 aa24.39■■□□□ 1.49
IFFO1-201ENST00000336604 C9orf84Q5VXU9 1444 aa24.38■■□□□ 1.49
IFFO1-201ENST00000336604 MSH5O43196 834 aa24.38■■□□□ 1.49
IFFO1-201ENST00000336604 DHX29Q7Z478 1369 aaKnown RBP24.37■■□□□ 1.49
IFFO1-201ENST00000336604 ABCC10Q5T3U5 1492 aa24.37■■□□□ 1.49
IFFO1-201ENST00000336604 CDC42BPAQ5VT25 1732 aa24.36■■□□□ 1.49
IFFO1-201ENST00000336604 BCORL1Q5H9F3 1711 aa24.36■■□□□ 1.49
IFFO1-201ENST00000336604 ABCA8O94911 1581 aa24.35■■□□□ 1.49
IFFO1-201ENST00000336604 TSPY4P0CV99 314 aa24.33■■□□□ 1.49
IFFO1-201ENST00000336604 TSPY10P0CW01 314 aa24.33■■□□□ 1.49
IFFO1-201ENST00000336604 HNRNPMP52272 730 aaKnown RBP eCLIP24.33■■□□□ 1.48
IFFO1-201ENST00000336604 SHANK2Q9UPX8 1470 aa24.32■■□□□ 1.48
IFFO1-201ENST00000336604 KDM5CP41229 1560 aa24.31■■□□□ 1.48
IFFO1-201ENST00000336604 ERICH6BQ5W0A0 696 aa24.3■■□□□ 1.48
IFFO1-201ENST00000336604 PPP4R2Q9NY27 417 aa24.29■■□□□ 1.48
IFFO1-201ENST00000336604 CARD11Q9BXL7 1154 aa24.29■■□□□ 1.48
IFFO1-201ENST00000336604 KDM2AQ9Y2K7 1162 aa24.29■■□□□ 1.48
IFFO1-201ENST00000336604 KIF15Q9NS87 1388 aa24.29■■□□□ 1.48
IFFO1-201ENST00000336604 UHRF1BP1Q6BDS2 1440 aa24.27■■□□□ 1.48
IFFO1-201ENST00000336604 RALGAPBQ86X10 1494 aa24.26■■□□□ 1.47
IFFO1-201ENST00000336604 ARID4BQ4LE39 1312 aaPredicted RBP24.24■■□□□ 1.47
IFFO1-201ENST00000336604 B4GALNT3Q6L9W6 998 aa24.23■■□□□ 1.47
IFFO1-201ENST00000336604 DCAF11Q8TEB1 546 aa24.23■■□□□ 1.47
IFFO1-201ENST00000336604 SENP3-EIF4A1A0A087X0R7 540 aa24.23■■□□□ 1.47
IFFO1-201ENST00000336604 ST20-MTHFSA0A0A6YYL1 179 aa24.22■■□□□ 1.47
IFFO1-201ENST00000336604 KDM5DQ9BY66 1539 aa24.22■■□□□ 1.47
IFFO1-201ENST00000336604 ERICH6Q7L0X2 663 aa24.21■■□□□ 1.47
IFFO1-201ENST00000336604 ARHGEF12Q9NZN5 1544 aa24.21■■□□□ 1.47
IFFO1-201ENST00000336604 PTPRGP23470 1445 aa24.21■■□□□ 1.47
IFFO1-201ENST00000336604 ROCK2O75116 1388 aaKnown RBP24.17■■□□□ 1.46
IFFO1-201ENST00000336604 ARHGEF5Q12774 1597 aa24.17■■□□□ 1.46
IFFO1-201ENST00000336604 PNISRQ8TF01 805 aaKnown RBP24.15■■□□□ 1.46
IFFO1-201ENST00000336604 SMG6Q86US8 1419 aaKnown RBP24.15■■□□□ 1.46
IFFO1-201ENST00000336604 CCDC141Q6ZP82 1450 aa24.15■■□□□ 1.46
IFFO1-201ENST00000336604 SAMD9LQ8IVG5 1584 aa24.15■■□□□ 1.46
IFFO1-201ENST00000336604 TMC1Q8TDI8 760 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms