RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 NISCHQ9Y2I1 1504 aa36.77■■■■□ 3.48
IFFO1-201ENST00000336604 SHROOM4Q9ULL8 1493 aa31.51■■■□□ 2.63
IFFO1-201ENST00000336604 CCDC180Q9P1Z9 1646 aa31.14■■■□□ 2.58
IFFO1-201ENST00000336604 ZCCHC6Q5VYS8 1495 aaKnown RBP31.11■■■□□ 2.57
IFFO1-201ENST00000336604 SUPT5HO00267 1087 aaKnown RBP30.92■■■□□ 2.54
IFFO1-201ENST00000336604 DCAF8L2P0C7V8 631 aa30.59■■■□□ 2.49
IFFO1-201ENST00000336604 DCAF1Q9Y4B6 1507 aa30.11■■■□□ 2.41
IFFO1-201ENST00000336604 CHIC1Q5VXU3 224 aa30.06■■■□□ 2.4
IFFO1-201ENST00000336604 MYO15BQ96JP2 1530 aa29.98■■■□□ 2.39
IFFO1-201ENST00000336604 ABCC9O60706 1549 aa29.36■■■□□ 2.29
IFFO1-201ENST00000336604 SCRIBQ14160 1630 aa29.31■■■□□ 2.28
IFFO1-201ENST00000336604 PCGF6Q9BYE7 350 aa29.23■■■□□ 2.27
IFFO1-201ENST00000336604 HRCP23327 699 aa29.22■■■□□ 2.27
IFFO1-201ENST00000336604 LOC105371045A0A1W2PR82 267 aa29.22■■■□□ 2.27
IFFO1-201ENST00000336604 RSF1Q96T23 1441 aaPredicted RBP29.16■■■□□ 2.26
IFFO1-201ENST00000336604 RB1CC1Q8TDY2 1594 aa28.86■■■□□ 2.21
IFFO1-201ENST00000336604 NACADO15069 1562 aa28.82■■■□□ 2.2
IFFO1-201ENST00000336604 TRIM41Q8WV44 630 aa28.77■■■□□ 2.2
IFFO1-201ENST00000336604 CECR2Q9BXF3 1484 aa28.73■■■□□ 2.19
IFFO1-201ENST00000336604 PPARGC1BQ86YN6 1023 aaKnown RBP28.67■■■□□ 2.18
IFFO1-201ENST00000336604 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
IFFO1-201ENST00000336604 TRIM26Q12899 539 aaPredicted RBP28.6■■■□□ 2.17
IFFO1-201ENST00000336604 FAM9AQ8IZU1 332 aaPredicted RBP28.59■■■□□ 2.17
IFFO1-201ENST00000336604 WIZO95785 1651 aa28.46■■■□□ 2.15
IFFO1-201ENST00000336604 EHMT2Q96KQ7 1210 aa28.39■■■□□ 2.14
IFFO1-201ENST00000336604 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
IFFO1-201ENST00000336604 EIF4G1Q04637 1599 aaKnown RBP28.07■■■□□ 2.08
IFFO1-201ENST00000336604 SMARCA4P51532 1647 aa27.98■■■□□ 2.07
IFFO1-201ENST00000336604 TOP2AP11388 1531 aaKnown RBP27.97■■■□□ 2.07
IFFO1-201ENST00000336604 ZEB1P37275 1124 aaPredicted RBP27.94■■■□□ 2.06
IFFO1-201ENST00000336604 UNC13AQ9UPW8 1703 aa27.92■■■□□ 2.06
IFFO1-201ENST00000336604 CCDC88BA6NC98 1476 aa27.91■■■□□ 2.06
IFFO1-201ENST00000336604 ABCC8Q09428 1581 aa27.88■■■□□ 2.05
IFFO1-201ENST00000336604 SMARCA2P51531 1590 aa27.84■■■□□ 2.05
IFFO1-201ENST00000336604 PABPN1Q86U42 306 aaKnown RBP eCLIP27.74■■■□□ 2.03
IFFO1-201ENST00000336604 SOGA1O94964 1423 aa27.65■■■□□ 2.02
IFFO1-201ENST00000336604 BICRAQ9NZM4 1560 aa27.61■■■□□ 2.01
IFFO1-201ENST00000336604 PELP1Q8IZL8 1130 aaKnown RBP27.58■■■□□ 2.01
IFFO1-201ENST00000336604 CEP162Q5TB80 1403 aa27.53■■■□□ 2
IFFO1-201ENST00000336604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.51■■□□□ 1.99
IFFO1-201ENST00000336604 RUSC2Q8N2Y8 1516 aa27.51■■□□□ 1.99
IFFO1-201ENST00000336604 TTBK1Q5TCY1 1321 aaPredicted RBP27.48■■□□□ 1.99
IFFO1-201ENST00000336604 CSRNP3Q8WYN3 585 aa27.47■■□□□ 1.99
IFFO1-201ENST00000336604 WRNQ14191 1432 aaPredicted RBP eCLIP27.47■■□□□ 1.99
IFFO1-201ENST00000336604 TNIKQ9UKE5 1360 aa27.45■■□□□ 1.98
IFFO1-201ENST00000336604 SCAF1Q9H7N4 1312 aaKnown RBP27.43■■□□□ 1.98
IFFO1-201ENST00000336604 EEA1Q15075 1411 aa27.42■■□□□ 1.98
IFFO1-201ENST00000336604 CCER1Q8TC90 406 aaPredicted RBP27.41■■□□□ 1.98
IFFO1-201ENST00000336604 PEG3Q9GZU2 1588 aa27.41■■□□□ 1.98
IFFO1-201ENST00000336604 UBTFP17480 764 aaKnown RBP27.41■■□□□ 1.98
IFFO1-201ENST00000336604 GOLGA3Q08378 1498 aa27.28■■□□□ 1.96
IFFO1-201ENST00000336604 ATAD2BQ9ULI0 1458 aa27.27■■□□□ 1.96
IFFO1-201ENST00000336604 SYNJ1O43426 1573 aa27.24■■□□□ 1.95
IFFO1-201ENST00000336604 BAZ1BQ9UIG0 1483 aaKnown RBP27.2■■□□□ 1.95
IFFO1-201ENST00000336604 CEP164Q9UPV0 1460 aa27.12■■□□□ 1.93
IFFO1-201ENST00000336604 KIF21BO75037 1637 aa27.05■■□□□ 1.92
IFFO1-201ENST00000336604 CLIP1P30622 1438 aa27■■□□□ 1.91
IFFO1-201ENST00000336604 RAPGEF2Q9Y4G8 1499 aa26.96■■□□□ 1.91
IFFO1-201ENST00000336604 RANGAP1P46060 587 aaPredicted RBP26.91■■□□□ 1.9
IFFO1-201ENST00000336604 DIEXFQ68CQ4 756 aaKnown RBP26.89■■□□□ 1.9
IFFO1-201ENST00000336604 VPS8Q8N3P4 1428 aa26.88■■□□□ 1.89
IFFO1-201ENST00000336604 TOP2BQ02880 1626 aa26.87■■□□□ 1.89
IFFO1-201ENST00000336604 HNRNPUL2Q1KMD3 747 aaKnown RBP26.85■■□□□ 1.89
IFFO1-201ENST00000336604 ACIN1Q9UKV3 1341 aaKnown RBP26.78■■□□□ 1.88
IFFO1-201ENST00000336604 NEUROD1Q13562 356 aa26.77■■□□□ 1.88
IFFO1-201ENST00000336604 APLP2Q06481 763 aa26.77■■□□□ 1.88
IFFO1-201ENST00000336604 BIVM-ERCC5R4GMW8 1640 aa26.74■■□□□ 1.87
IFFO1-201ENST00000336604 NCAPD3P42695 1498 aa26.71■■□□□ 1.87
IFFO1-201ENST00000336604 HMGXB3Q12766 1538 aa26.68■■□□□ 1.86
IFFO1-201ENST00000336604 ZNF316A6NFI3 1004 aaPredicted RBP26.65■■□□□ 1.86
IFFO1-201ENST00000336604 PRXQ9BXM0 1461 aa26.65■■□□□ 1.86
IFFO1-201ENST00000336604 CUX1P39880 1505 aa26.63■■□□□ 1.85
IFFO1-201ENST00000336604 GTF3C3Q9Y5Q9 886 aa26.62■■□□□ 1.85
IFFO1-201ENST00000336604 ERICH3Q5RHP9 1530 aa26.61■■□□□ 1.85
IFFO1-201ENST00000336604 ARAP1Q96P48 1450 aa26.55■■□□□ 1.84
IFFO1-201ENST00000336604 CFTRP13569 1480 aa26.53■■□□□ 1.84
IFFO1-201ENST00000336604 KIF27Q86VH2 1401 aa26.52■■□□□ 1.84
IFFO1-201ENST00000336604 CENPBP07199 599 aaPredicted RBP26.5■■□□□ 1.83
IFFO1-201ENST00000336604 KANK4Q5T7N3 995 aaPredicted RBP26.48■■□□□ 1.83
IFFO1-201ENST00000336604 MYT1Q01538 1121 aa26.38■■□□□ 1.81
IFFO1-201ENST00000336604 MIER1Q8N108 512 aa26.32■■□□□ 1.8
IFFO1-201ENST00000336604 ARHGAP35Q9NRY4 1499 aa26.32■■□□□ 1.8
IFFO1-201ENST00000336604 YTHDC1Q96MU7 727 aaKnown RBP26.31■■□□□ 1.8
IFFO1-201ENST00000336604 DHX57Q6P158 1386 aaKnown RBP26.29■■□□□ 1.8
IFFO1-201ENST00000336604 CUX2O14529 1486 aa26.27■■□□□ 1.8
IFFO1-201ENST00000336604 IGF1RP08069 1367 aa26.25■■□□□ 1.79
IFFO1-201ENST00000336604 RRBP1Q9P2E9 1410 aaKnown RBP26.25■■□□□ 1.79
IFFO1-201ENST00000336604 CADPSQ9ULU8 1353 aa26.23■■□□□ 1.79
IFFO1-201ENST00000336604 CLSPNQ9HAW4 1339 aa26.22■■□□□ 1.79
IFFO1-201ENST00000336604 PRDM2Q13029 1718 aa26.2■■□□□ 1.78
IFFO1-201ENST00000336604 CCNB3Q8WWL7 1395 aa26.16■■□□□ 1.78
IFFO1-201ENST00000336604 FGD5Q6ZNL6 1462 aa26.15■■□□□ 1.78
IFFO1-201ENST00000336604 ITGAEP38570 1179 aa26.14■■□□□ 1.77
IFFO1-201ENST00000336604 CARMIL1Q5VZK9 1371 aa26.13■■□□□ 1.77
IFFO1-201ENST00000336604 TIAM1Q13009 1591 aa26.01■■□□□ 1.75
IFFO1-201ENST00000336604 CC2D2AQ9P2K1 1620 aa26.01■■□□□ 1.75
IFFO1-201ENST00000336604 FANCD2Q9BXW9 1451 aa25.99■■□□□ 1.75
IFFO1-201ENST00000336604 P3H3Q8IVL6 736 aa25.96■■□□□ 1.75
IFFO1-201ENST00000336604 RAB3GAP2Q9H2M9 1393 aa25.95■■□□□ 1.74
IFFO1-201ENST00000336604 MAP3K1Q13233 1512 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms