RNA–Protein interactions for RNA: ENST00000334035.9

CPEB4-202, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 6,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-202ENST00000334035 PDE4AP27815 886 aa8.47□□□□□ -1.05
CPEB4-202ENST00000334035 MCCP23508 829 aa8.47□□□□□ -1.05
CPEB4-202ENST00000334035 HAP1P54257 671 aaPredicted RBP8.46□□□□□ -1.05
CPEB4-202ENST00000334035 AAMPQ13685 434 aa8.46□□□□□ -1.05
CPEB4-202ENST00000334035 EIF3AQ14152 1382 aaKnown RBP8.46□□□□□ -1.05
CPEB4-202ENST00000334035 MROH2BQ7Z745 1585 aa8.46□□□□□ -1.05
CPEB4-202ENST00000334035 FAM43AQ8N2R8 423 aa8.46□□□□□ -1.06
CPEB4-202ENST00000334035 NGEFQ8N5V2 710 aa8.46□□□□□ -1.06
CPEB4-202ENST00000334035 CSPP1Q1MSJ5 1256 aa8.45□□□□□ -1.06
CPEB4-202ENST00000334035 CECR2Q9BXF3 1484 aa8.45□□□□□ -1.06
CPEB4-202ENST00000334035 CHGAP10645 457 aaKnown RBP8.44□□□□□ -1.06
CPEB4-202ENST00000334035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.44□□□□□ -1.063e-8■□□□□ 8.6
CPEB4-202ENST00000334035 CARMIL1Q5VZK9 1371 aa8.44□□□□□ -1.06
CPEB4-202ENST00000334035 PHF14O94880 888 aa8.44□□□□□ -1.06
CPEB4-202ENST00000334035 ABCC8Q09428 1581 aa8.44□□□□□ -1.06
CPEB4-202ENST00000334035 MYBBP1AQ9BQG0 1328 aaKnown RBP8.44□□□□□ -1.06
CPEB4-202ENST00000334035 NLRP13Q86W25 1043 aa8.44□□□□□ -1.06
CPEB4-202ENST00000334035 TPM2P07951 284 aa8.43□□□□□ -1.06
CPEB4-202ENST00000334035 IPO8O15397 1037 aaKnown RBP8.43□□□□□ -1.06
CPEB4-202ENST00000334035 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.43□□□□□ -1.06
CPEB4-202ENST00000334035 ISY1Q9ULR0 285 aaKnown RBP8.43□□□□□ -1.06
CPEB4-202ENST00000334035 RRP1P56182 461 aaKnown RBP8.43□□□□□ -1.06
CPEB4-202ENST00000334035 SMARCA2P51531 1590 aa8.42□□□□□ -1.06
CPEB4-202ENST00000334035 CFDP1Q9UEE9 299 aaPredicted RBP8.42□□□□□ -1.06
CPEB4-202ENST00000334035 VSIG10Q8N0Z9 540 aa8.41□□□□□ -1.06
CPEB4-202ENST00000334035 CNTLNQ9NXG0 1405 aa8.41□□□□□ -1.06
CPEB4-202ENST00000334035 KIF21BO75037 1637 aa8.41□□□□□ -1.06
CPEB4-202ENST00000334035 KANK4Q5T7N3 995 aaPredicted RBP8.41□□□□□ -1.06
CPEB4-202ENST00000334035 SENP3-EIF4A1A0A087X0R7 540 aa8.41□□□□□ -1.06
CPEB4-202ENST00000334035 PRKRIP1Q9H875 184 aaPredicted RBP8.41□□□□□ -1.06
CPEB4-202ENST00000334035 PLEKHD1A6NEE1 506 aa8.4□□□□□ -1.06
CPEB4-202ENST00000334035 HTATSF1O43719 755 aaKnown RBP8.4□□□□□ -1.06
CPEB4-202ENST00000334035 FRAT1Q92837 279 aaPredicted RBP8.4□□□□□ -1.07
CPEB4-202ENST00000334035 CALD1Q05682 793 aaKnown RBP8.4□□□□□ -1.07
CPEB4-202ENST00000334035 GOLGA2Q08379 1002 aa8.4□□□□□ -1.07
CPEB4-202ENST00000334035 PRKCSHP14314 528 aaPredicted RBP8.39□□□□□ -1.07
CPEB4-202ENST00000334035 ESF1Q9H501 851 aaKnown RBP8.39□□□□□ -1.07
CPEB4-202ENST00000334035 CGNL1Q0VF96 1302 aa8.39□□□□□ -1.07
CPEB4-202ENST00000334035 CUX2O14529 1486 aa8.39□□□□□ -1.07
CPEB4-202ENST00000334035 MPHOSPH9Q99550 1183 aa8.39□□□□□ -1.07
CPEB4-202ENST00000334035 RRBP1Q9P2E9 1410 aaKnown RBP8.38□□□□□ -1.07
CPEB4-202ENST00000334035 STAG3Q9UJ98 1225 aa8.38□□□□□ -1.07
CPEB4-202ENST00000334035 MRE11P49959 708 aa8.38□□□□□ -1.07
CPEB4-202ENST00000334035 PLCB2Q00722 1185 aa8.38□□□□□ -1.07
CPEB4-202ENST00000334035 CC2D1BQ5T0F9 858 aaKnown RBP8.38□□□□□ -1.07
CPEB4-202ENST00000334035 RAPGEF2Q9Y4G8 1499 aa8.38□□□□□ -1.07
CPEB4-202ENST00000334035 PKNOX2Q96KN3 472 aa8.37□□□□□ -1.07
CPEB4-202ENST00000334035 GOLGA6L4A6NEF3 574 aa8.37□□□□□ -1.07
CPEB4-202ENST00000334035 CUX1P39880 1505 aa8.37□□□□□ -1.07
CPEB4-202ENST00000334035 CHMP5Q9NZZ3 219 aa8.37□□□□□ -1.07
CPEB4-202ENST00000334035 CCDC18Q5T9S5 1454 aa8.37□□□□□ -1.07
CPEB4-202ENST00000334035 SLKQ9H2G2 1235 aaPredicted RBP8.37□□□□□ -1.07
CPEB4-202ENST00000334035 SPRYD3Q8NCJ5 442 aa8.36□□□□□ -1.07
CPEB4-202ENST00000334035 ANKRD30AQ9BXX3 1397 aa8.36□□□□□ -1.07
CPEB4-202ENST00000334035 RRP9O43818 475 aaKnown RBP8.36□□□□□ -1.07
CPEB4-202ENST00000334035 TNNT3P45378 269 aaPredicted RBP8.35□□□□□ -1.07
CPEB4-202ENST00000334035 ERICH3Q5RHP9 1530 aa8.35□□□□□ -1.07
CPEB4-202ENST00000334035 UACAQ9BZF9 1416 aa8.35□□□□□ -1.07
CPEB4-202ENST00000334035 NPM1P06748 294 aaKnown RBP eCLIP8.35□□□□□ -1.07
CPEB4-202ENST00000334035 SMG6Q86US8 1419 aaKnown RBP8.35□□□□□ -1.07
CPEB4-202ENST00000334035 NFKBIBQ15653 356 aa8.35□□□□□ -1.07
CPEB4-202ENST00000334035 CENPJQ9HC77 1338 aaPredicted RBP8.35□□□□□ -1.07
CPEB4-202ENST00000334035 WIZO95785 1651 aa8.35□□□□□ -1.07
CPEB4-202ENST00000334035 DRC7Q8IY82 874 aa8.34□□□□□ -1.07
CPEB4-202ENST00000334035 GZF1Q9H116 711 aaPredicted RBP8.34□□□□□ -1.07
CPEB4-202ENST00000334035 KIF16BQ96L93 1317 aa8.34□□□□□ -1.07
CPEB4-202ENST00000334035 TPM4P67936 248 aa8.34□□□□□ -1.07
CPEB4-202ENST00000334035 TPRNQ4KMQ1 711 aa8.34□□□□□ -1.07
CPEB4-202ENST00000334035 BRD4O60885 1362 aaPredicted RBP8.33□□□□□ -1.08
CPEB4-202ENST00000334035 NINLQ9Y2I6 1382 aa8.33□□□□□ -1.08
CPEB4-202ENST00000334035 MIA2Q96PC5 1412 aa8.33□□□□□ -1.08
CPEB4-202ENST00000334035 CCDC7Q96M83 1385 aa8.33□□□□□ -1.08
CPEB4-202ENST00000334035 E9PSI1 815 aa8.33□□□□□ -1.08
CPEB4-202ENST00000334035 ST18O60284 1047 aa8.33□□□□□ -1.08
CPEB4-202ENST00000334035 TPM3P06753 285 aa8.33□□□□□ -1.08
CPEB4-202ENST00000334035 NEUROD2Q15784 382 aa8.33□□□□□ -1.08
CPEB4-202ENST00000334035 RGL3Q3MIN7 710 aa8.33□□□□□ -1.08
CPEB4-202ENST00000334035 KANK1Q14678 1352 aa8.33□□□□□ -1.08
CPEB4-202ENST00000334035 DCAF11Q8TEB1 546 aa8.33□□□□□ -1.08
CPEB4-202ENST00000334035 L3MBTL2Q969R5 705 aa8.32□□□□□ -1.08
CPEB4-202ENST00000334035 EXOC6Q8TAG9 804 aa8.32□□□□□ -1.08
CPEB4-202ENST00000334035 CHMP4AQ9BY43 222 aa8.31□□□□□ -1.08
CPEB4-202ENST00000334035 UBE2Q2Q8WVN8 375 aa8.31□□□□□ -1.08
CPEB4-202ENST00000334035 MORC1Q86VD1 984 aa8.31□□□□□ -1.08
CPEB4-202ENST00000334035 KCNH8Q96L42 1107 aa8.31□□□□□ -1.08
CPEB4-202ENST00000334035 MFAP1P55081 439 aaKnown RBP8.31□□□□□ -1.08
CPEB4-202ENST00000334035 ATP6V1DQ9Y5K8 247 aa8.31□□□□□ -1.08
CPEB4-202ENST00000334035 CCDC39Q9UFE4 941 aa8.3□□□□□ -1.08
CPEB4-202ENST00000334035 CCDC173Q0VFZ6 552 aa8.3□□□□□ -1.08
CPEB4-202ENST00000334035 PKD2Q13563 968 aa8.3□□□□□ -1.08
CPEB4-202ENST00000334035 SMARCA4P51532 1647 aa8.3□□□□□ -1.08
CPEB4-202ENST00000334035 TAF3Q5VWG9 929 aa8.29□□□□□ -1.08
CPEB4-202ENST00000334035 GOLGA6L1Q8N7Z2 621 aa8.29□□□□□ -1.08
CPEB4-202ENST00000334035 CHMP4CQ96CF2 233 aa8.29□□□□□ -1.08
CPEB4-202ENST00000334035 NUCB2P80303 420 aa8.29□□□□□ -1.08
CPEB4-202ENST00000334035 RSPH4AQ5TD94 716 aa8.29□□□□□ -1.08
CPEB4-202ENST00000334035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.29□□□□□ -1.08
CPEB4-202ENST00000334035 CRBNQ96SW2 442 aa8.29□□□□□ -1.08
CPEB4-202ENST00000334035 DDX49Q9Y6V7 483 aaKnown RBP8.29□□□□□ -1.08
CPEB4-202ENST00000334035 WASHC2AQ641Q2 1341 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms