RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 DAPK1P53355 1430 aa18.85■□□□□ 0.61
TUBA1B-201ENST00000332858 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
TUBA1B-201ENST00000332858 EIF4G3O43432 1585 aaKnown RBP18.83■□□□□ 0.6
TUBA1B-201ENST00000332858 PRG4Q92954 1404 aaPredicted RBP18.82■□□□□ 0.6
TUBA1B-201ENST00000332858 FBLN2P98095 1184 aa18.82■□□□□ 0.6
TUBA1B-201ENST00000332858 C11orf95C9JLR9 678 aaPredicted RBP18.82■□□□□ 0.6
TUBA1B-201ENST00000332858 TSHZ2Q9NRE2 1034 aa18.81■□□□□ 0.6
TUBA1B-201ENST00000332858 RAPGEF6Q8TEU7 1601 aa18.8■□□□□ 0.6
TUBA1B-201ENST00000332858 NBPF8Q3BBV2 869 aa18.8■□□□□ 0.6
TUBA1B-201ENST00000332858 CHMP7Q8WUX9 453 aaPredicted RBP18.8■□□□□ 0.6
TUBA1B-201ENST00000332858 EIF4G2P78344 907 aaKnown RBP eCLIP18.79■□□□□ 0.6
TUBA1B-201ENST00000332858 ANKRD30BQ9BXX2 1392 aa18.79■□□□□ 0.6
TUBA1B-201ENST00000332858 PLB1Q6P1J6 1458 aa18.79■□□□□ 0.6
TUBA1B-201ENST00000332858 ROCK1Q13464 1354 aa18.78■□□□□ 0.6
TUBA1B-201ENST00000332858 SLC4A1APQ9BWU0 796 aaKnown RBP18.78■□□□□ 0.6
TUBA1B-201ENST00000332858 DNMT1P26358 1616 aaKnown RBP18.78■□□□□ 0.6
TUBA1B-201ENST00000332858 CDK11AQ9UQ88 783 aaPredicted RBP18.77■□□□□ 0.6
TUBA1B-201ENST00000332858 PLPPR3Q6T4P5 718 aa18.77■□□□□ 0.6
TUBA1B-201ENST00000332858 ZNF777Q9ULD5 760 aaPredicted RBP18.77■□□□□ 0.59
TUBA1B-201ENST00000332858 CFDP1Q9UEE9 299 aaPredicted RBP18.75■□□□□ 0.59
TUBA1B-201ENST00000332858 CCDC184Q52MB2 194 aa18.75■□□□□ 0.59
TUBA1B-201ENST00000332858 CEP170Q5SW79 1584 aa18.74■□□□□ 0.59
TUBA1B-201ENST00000332858 ERCC6Q03468 1493 aa18.74■□□□□ 0.59
TUBA1B-201ENST00000332858 RPRD2Q5VT52 1461 aaKnown RBP18.73■□□□□ 0.59
TUBA1B-201ENST00000332858 TROQ12816 1431 aaPredicted RBP18.72■□□□□ 0.59
TUBA1B-201ENST00000332858 HNRNPUQ00839 825 aaKnown RBP eCLIP18.71■□□□□ 0.59
TUBA1B-201ENST00000332858 JPH4Q96JJ6 628 aa18.71■□□□□ 0.59
TUBA1B-201ENST00000332858 GPATCH8Q9UKJ3 1502 aaKnown RBP18.7■□□□□ 0.58
TUBA1B-201ENST00000332858 KIF14Q15058 1648 aa18.7■□□□□ 0.58
TUBA1B-201ENST00000332858 CAMSAP2Q08AD1 1489 aa18.7■□□□□ 0.58
TUBA1B-201ENST00000332858 TEX14Q8IWB6 1497 aa18.7■□□□□ 0.58
TUBA1B-201ENST00000332858 SYNJ2O15056 1496 aa18.69■□□□□ 0.58
TUBA1B-201ENST00000332858 MAGI1Q96QZ7 1491 aaPredicted RBP18.69■□□□□ 0.58
TUBA1B-201ENST00000332858 NCOA1Q15788 1441 aa18.68■□□□□ 0.58
TUBA1B-201ENST00000332858 PZPP20742 1482 aa18.68■□□□□ 0.58
TUBA1B-201ENST00000332858 CCDC7Q96M83 1385 aa18.67■□□□□ 0.58
TUBA1B-201ENST00000332858 NEFLP07196 543 aa18.67■□□□□ 0.58
TUBA1B-201ENST00000332858 CNTLNQ9NXG0 1405 aa18.66■□□□□ 0.58
TUBA1B-201ENST00000332858 SPATA31E1Q6ZUB1 1445 aa18.63■□□□□ 0.57
TUBA1B-201ENST00000332858 PRKRIP1Q9H875 184 aaPredicted RBP18.63■□□□□ 0.57
TUBA1B-201ENST00000332858 KIF7Q2M1P5 1343 aa18.62■□□□□ 0.57
TUBA1B-201ENST00000332858 PKD2Q13563 968 aa18.62■□□□□ 0.57
TUBA1B-201ENST00000332858 NUP160Q12769 1436 aa18.61■□□□□ 0.57
TUBA1B-201ENST00000332858 IRX6P78412 446 aaPredicted RBP18.61■□□□□ 0.57
TUBA1B-201ENST00000332858 ZNF326Q5BKZ1 582 aaKnown RBP18.61■□□□□ 0.57
TUBA1B-201ENST00000332858 CARMIL2Q6F5E8 1435 aa18.6■□□□□ 0.57
TUBA1B-201ENST00000332858 PLEKHD1A6NEE1 506 aa18.58■□□□□ 0.57
TUBA1B-201ENST00000332858 FAM9BQ8IZU0 186 aa18.58■□□□□ 0.57
TUBA1B-201ENST00000332858 RTN4Q9NQC3 1192 aaKnown RBP18.58■□□□□ 0.57
TUBA1B-201ENST00000332858 ITSN2Q9NZM3 1697 aa18.58■□□□□ 0.56
TUBA1B-201ENST00000332858 PRKCSHP14314 528 aaPredicted RBP18.57■□□□□ 0.56
TUBA1B-201ENST00000332858 CNGB1Q14028 1251 aaPredicted RBP18.56■□□□□ 0.56
TUBA1B-201ENST00000332858 ADCY10Q96PN6 1610 aa18.56■□□□□ 0.56
TUBA1B-201ENST00000332858 ATP10BO94823 1461 aa18.56■□□□□ 0.56
TUBA1B-201ENST00000332858 KIAA1107Q9UPP5 1409 aa18.56■□□□□ 0.56
TUBA1B-201ENST00000332858 ADGRL2O95490 1459 aa18.56■□□□□ 0.56
TUBA1B-201ENST00000332858 ANKRD30AQ9BXX3 1397 aa18.56■□□□□ 0.56
TUBA1B-201ENST00000332858 ANKRD50Q9ULJ7 1429 aa18.55■□□□□ 0.56
TUBA1B-201ENST00000332858 MRS2Q9HD23 443 aa18.55■□□□□ 0.56
TUBA1B-201ENST00000332858 ADGBQ8N7X0 1667 aa18.55■□□□□ 0.56
TUBA1B-201ENST00000332858 CROCC2H7BZ55 1655 aa18.53■□□□□ 0.56
TUBA1B-201ENST00000332858 HNRNPMP52272 730 aaKnown RBP eCLIP18.53■□□□□ 0.56
TUBA1B-201ENST00000332858 CDC42BPAQ5VT25 1732 aa18.53■□□□□ 0.56
TUBA1B-201ENST00000332858 ABCC10Q5T3U5 1492 aa18.53■□□□□ 0.56
TUBA1B-201ENST00000332858 POLR3GLQ9BT43 218 aa18.52■□□□□ 0.56
TUBA1B-201ENST00000332858 ABCA8O94911 1581 aa18.52■□□□□ 0.56
TUBA1B-201ENST00000332858 MBD5Q9P267 1494 aa18.52■□□□□ 0.56
TUBA1B-201ENST00000332858 NUP155O75694 1391 aa18.52■□□□□ 0.55
TUBA1B-201ENST00000332858 C9orf84Q5VXU9 1444 aa18.5■□□□□ 0.55
TUBA1B-201ENST00000332858 USP47Q96K76 1375 aa18.49■□□□□ 0.55
TUBA1B-201ENST00000332858 BCORL1Q5H9F3 1711 aa18.48■□□□□ 0.55
TUBA1B-201ENST00000332858 TSPY4P0CV99 314 aa18.47■□□□□ 0.55
TUBA1B-201ENST00000332858 TSPY10P0CW01 314 aa18.47■□□□□ 0.55
TUBA1B-201ENST00000332858 RBM19Q9Y4C8 960 aaKnown RBP18.46■□□□□ 0.55
TUBA1B-201ENST00000332858 KDM2AQ9Y2K7 1162 aa18.46■□□□□ 0.55
TUBA1B-201ENST00000332858 DHX29Q7Z478 1369 aaKnown RBP18.45■□□□□ 0.54
TUBA1B-201ENST00000332858 POLR1AO95602 1720 aaPredicted RBP18.45■□□□□ 0.54
TUBA1B-201ENST00000332858 SENP3-EIF4A1A0A087X0R7 540 aa18.43■□□□□ 0.54
TUBA1B-201ENST00000332858 PTPRGP23470 1445 aa18.43■□□□□ 0.54
TUBA1B-201ENST00000332858 KIF15Q9NS87 1388 aa18.43■□□□□ 0.54
TUBA1B-201ENST00000332858 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
TUBA1B-201ENST00000332858 SHANK2Q9UPX8 1470 aa18.41■□□□□ 0.54
TUBA1B-201ENST00000332858 ZBED9Q6R2W3 1325 aa18.4■□□□□ 0.54
TUBA1B-201ENST00000332858 CARD11Q9BXL7 1154 aa18.4■□□□□ 0.54
TUBA1B-201ENST00000332858 KDM5CP41229 1560 aa18.4■□□□□ 0.54
TUBA1B-201ENST00000332858 DCAF11Q8TEB1 546 aa18.4■□□□□ 0.54
TUBA1B-201ENST00000332858 ST20-MTHFSA0A0A6YYL1 179 aa18.37■□□□□ 0.53
TUBA1B-201ENST00000332858 UHRF1BP1Q6BDS2 1440 aa18.37■□□□□ 0.53
TUBA1B-201ENST00000332858 SAMD9LQ8IVG5 1584 aa18.35■□□□□ 0.53
TUBA1B-201ENST00000332858 CDC42BPBQ9Y5S2 1711 aa18.35■□□□□ 0.53
TUBA1B-201ENST00000332858 RALGAPBQ86X10 1494 aa18.35■□□□□ 0.53
TUBA1B-201ENST00000332858 KDM5DQ9BY66 1539 aa18.33■□□□□ 0.53
TUBA1B-201ENST00000332858 ARHGEF5Q12774 1597 aa18.32■□□□□ 0.52
TUBA1B-201ENST00000332858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.52
TUBA1B-201ENST00000332858 CCDC141Q6ZP82 1450 aa18.31■□□□□ 0.52
TUBA1B-201ENST00000332858 RGL3Q3MIN7 710 aa18.31■□□□□ 0.52
TUBA1B-201ENST00000332858 ANP32EQ9BTT0 268 aa18.31■□□□□ 0.52
TUBA1B-201ENST00000332858 B4GALNT3Q6L9W6 998 aa18.3■□□□□ 0.52
TUBA1B-201ENST00000332858 FAM135AQ9P2D6 1515 aa18.29■□□□□ 0.52
TUBA1B-201ENST00000332858 PPP4R2Q9NY27 417 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms