RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 NEO1Q92859 1461 aa40.46■■■■■ 4.07
SMDT1-201ENST00000331479 PPARGC1BQ86YN6 1023 aaKnown RBP40.43■■■■■ 4.06
SMDT1-201ENST00000331479 EFCAB2Q5VUJ9 269 aa40.42■■■■■ 4.06
SMDT1-201ENST00000331479 COL17A1Q9UMD9 1497 aaPredicted RBP40.4■■■■■ 4.06
SMDT1-201ENST00000331479 CFAP74Q9C0B2 1584 aa40.4■■■■■ 4.06
SMDT1-201ENST00000331479 AKNAQ7Z591 1439 aa40.39■■■■■ 4.06
SMDT1-201ENST00000331479 KDM6BO15054 1643 aa40.37■■■■■ 4.05
SMDT1-201ENST00000331479 PHLDB1Q86UU1 1377 aa40.37■■■■■ 4.05
SMDT1-201ENST00000331479 CFDP1Q9UEE9 299 aaPredicted RBP40.36■■■■■ 4.05
SMDT1-201ENST00000331479 ITSN2Q9NZM3 1697 aa40.36■■■■■ 4.05
SMDT1-201ENST00000331479 ZNF777Q9ULD5 760 aaPredicted RBP40.31■■■■■ 4.04
SMDT1-201ENST00000331479 ADGRL1O94910 1474 aa40.29■■■■■ 4.04
SMDT1-201ENST00000331479 SAMD9LQ8IVG5 1584 aa40.27■■■■■ 4.04
SMDT1-201ENST00000331479 MYOM3Q5VTT5 1437 aa40.26■■■■■ 4.04
SMDT1-201ENST00000331479 SCAPERQ9BY12 1400 aa40.24■■■■■ 4.03
SMDT1-201ENST00000331479 ZNF644Q9H582 1327 aaPredicted RBP40.23■■■■■ 4.03
SMDT1-201ENST00000331479 RAPGEF3O95398 923 aa40.23■■■■■ 4.03
SMDT1-201ENST00000331479 ABCC1P33527 1531 aa40.21■■■■■ 4.03
SMDT1-201ENST00000331479 DENND4BO75064 1496 aaPredicted RBP40.19■■■■■ 4.02
SMDT1-201ENST00000331479 ARHGEF12Q9NZN5 1544 aa40.19■■■■■ 4.02
SMDT1-201ENST00000331479 FRMPD1Q5SYB0 1578 aa40.16■■■■■ 4.02
SMDT1-201ENST00000331479 MIA2Q96PC5 1412 aa40.16■■■■■ 4.02
SMDT1-201ENST00000331479 RICTORQ6R327 1708 aa40.14■■■■■ 4.02
SMDT1-201ENST00000331479 SYCP2Q9BX26 1530 aa40.13■■■■■ 4.01
SMDT1-201ENST00000331479 CAMSAP2Q08AD1 1489 aa40.12■■■■■ 4.01
SMDT1-201ENST00000331479 POGZQ7Z3K3 1410 aa40.12■■■■■ 4.01
SMDT1-201ENST00000331479 HNRNPMP52272 730 aaKnown RBP eCLIP40.11■■■■■ 4.01
SMDT1-201ENST00000331479 FGD6Q6ZV73 1430 aa40.11■■■■■ 4.01
SMDT1-201ENST00000331479 PLEKHH2Q8IVE3 1493 aa40.1■■■■■ 4.01
SMDT1-201ENST00000331479 KIAA1107Q9UPP5 1409 aa40.1■■■■■ 4.01
SMDT1-201ENST00000331479 TRAPPC8Q9Y2L5 1435 aa40.09■■■■■ 4.01
SMDT1-201ENST00000331479 AFAP1Q8N556 730 aa40.07■■■■■ 4.01
SMDT1-201ENST00000331479 PTPN23Q9H3S7 1636 aa40.05■■■■■ 4
SMDT1-201ENST00000331479 ZNF518AQ6AHZ1 1483 aa40.03■■■■■ 4
SMDT1-201ENST00000331479 MBD5Q9P267 1494 aa40.03■■■■■ 4
SMDT1-201ENST00000331479 TCOF1Q13428 1488 aaKnown RBP39.98■■■■□ 3.99
SMDT1-201ENST00000331479 KDM5CP41229 1560 aa39.98■■■■□ 3.99
SMDT1-201ENST00000331479 ZMYM4Q5VZL5 1548 aa39.97■■■■□ 3.99
SMDT1-201ENST00000331479 ARHGEF5Q12774 1597 aa39.9■■■■□ 3.98
SMDT1-201ENST00000331479 CCDC141Q6ZP82 1450 aa39.88■■■■□ 3.97
SMDT1-201ENST00000331479 FAM50AQ14320 339 aaKnown RBP39.88■■■■□ 3.97
SMDT1-201ENST00000331479 RSPH4AQ5TD94 716 aa39.86■■■■□ 3.97
SMDT1-201ENST00000331479 YEATS2Q9ULM3 1422 aa39.86■■■■□ 3.97
SMDT1-201ENST00000331479 MAGI2Q86UL8 1455 aa39.86■■■■□ 3.97
SMDT1-201ENST00000331479 HECW2Q9P2P5 1572 aa39.86■■■■□ 3.97
SMDT1-201ENST00000331479 MLH3Q9UHC1 1453 aa39.85■■■■□ 3.97
SMDT1-201ENST00000331479 SPAG9O60271 1321 aaKnown RBP39.84■■■■□ 3.97
SMDT1-201ENST00000331479 ZFYVE16Q7Z3T8 1539 aa39.83■■■■□ 3.97
SMDT1-201ENST00000331479 MYT1LQ9UL68 1186 aa39.82■■■■□ 3.97
SMDT1-201ENST00000331479 KIDINS220Q9ULH0 1771 aa39.8■■■■□ 3.96
SMDT1-201ENST00000331479 RRBP1Q9P2E9 1410 aaKnown RBP39.8■■■■□ 3.96
SMDT1-201ENST00000331479 ARHGEF40Q8TER5 1519 aa39.8■■■■□ 3.96
SMDT1-201ENST00000331479 ABCC5O15440 1437 aa39.79■■■■□ 3.96
SMDT1-201ENST00000331479 INO80Q9ULG1 1556 aaPredicted RBP39.77■■■■□ 3.96
SMDT1-201ENST00000331479 DNMT1P26358 1616 aaKnown RBP39.77■■■■□ 3.96
SMDT1-201ENST00000331479 DAPK1P53355 1430 aa39.76■■■■□ 3.96
SMDT1-201ENST00000331479 ATP7AQ04656 1500 aa39.76■■■■□ 3.95
SMDT1-201ENST00000331479 TSPY4P0CV99 314 aa39.74■■■■□ 3.95
SMDT1-201ENST00000331479 TSPY10P0CW01 314 aa39.74■■■■□ 3.95
SMDT1-201ENST00000331479 ABCA6Q8N139 1617 aa39.73■■■■□ 3.95
SMDT1-201ENST00000331479 DIP2CQ9Y2E4 1556 aa39.71■■■■□ 3.95
SMDT1-201ENST00000331479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.71■■■■□ 3.953e-8■■■□□ 16.5
SMDT1-201ENST00000331479 CROCC2H7BZ55 1655 aa39.71■■■■□ 3.95
SMDT1-201ENST00000331479 RTEL1-TNFRSF6BF6WH68 1400 aa39.71■■■■□ 3.95
SMDT1-201ENST00000331479 C9orf84Q5VXU9 1444 aa39.69■■■■□ 3.94
SMDT1-201ENST00000331479 ATP10AO60312 1499 aa39.68■■■■□ 3.94
SMDT1-201ENST00000331479 MAST1Q9Y2H9 1570 aa39.67■■■■□ 3.94
SMDT1-201ENST00000331479 SHANK2Q9UPX8 1470 aa39.65■■■■□ 3.94
SMDT1-201ENST00000331479 PTPRKQ15262 1439 aa39.61■■■■□ 3.93
SMDT1-201ENST00000331479 SIGLEC1Q9BZZ2 1709 aa39.61■■■■□ 3.93
SMDT1-201ENST00000331479 CHIC2Q9UKJ5 165 aa39.6■■■■□ 3.93
SMDT1-201ENST00000331479 ITGAEP38570 1179 aa39.59■■■■□ 3.93
SMDT1-201ENST00000331479 ADGBQ8N7X0 1667 aa39.55■■■■□ 3.92
SMDT1-201ENST00000331479 REREQ9P2R6 1566 aa39.54■■■■□ 3.92
SMDT1-201ENST00000331479 A2MP01023 1474 aa39.52■■■■□ 3.92
SMDT1-201ENST00000331479 PLXNC1O60486 1568 aa39.52■■■■□ 3.92
SMDT1-201ENST00000331479 ARID4BQ4LE39 1312 aaPredicted RBP39.49■■■■□ 3.91
SMDT1-201ENST00000331479 ADGRL2O95490 1459 aa39.47■■■■□ 3.91
SMDT1-201ENST00000331479 RRP7BPQ9NSQ0 103 aa39.47■■■■□ 3.91
SMDT1-201ENST00000331479 NCOA1Q15788 1441 aa39.47■■■■□ 3.91
SMDT1-201ENST00000331479 DHX29Q7Z478 1369 aaKnown RBP39.45■■■■□ 3.91
SMDT1-201ENST00000331479 ANKRD30AQ9BXX3 1397 aa39.45■■■■□ 3.91
SMDT1-201ENST00000331479 KIF15Q9NS87 1388 aa39.44■■■■□ 3.9
SMDT1-201ENST00000331479 AGLP35573 1532 aa39.41■■■■□ 3.9
SMDT1-201ENST00000331479 DUOX2Q9NRD8 1548 aa39.38■■■■□ 3.89
SMDT1-201ENST00000331479 ROCK1Q13464 1354 aa39.37■■■■□ 3.89
SMDT1-201ENST00000331479 MLECQ14165 292 aa39.36■■■■□ 3.89
SMDT1-201ENST00000331479 BCORL1Q5H9F3 1711 aa39.35■■■■□ 3.89
SMDT1-201ENST00000331479 KDM4FA0A1W2PPD8 638 aa39.29■■■■□ 3.88
SMDT1-201ENST00000331479 KIF3BO15066 747 aa39.29■■■■□ 3.88
SMDT1-201ENST00000331479 ERBINQ96RT1 1412 aa39.26■■■■□ 3.88
SMDT1-201ENST00000331479 ADAMTSL3P82987 1691 aa39.25■■■■□ 3.87
SMDT1-201ENST00000331479 EIF2AK4Q9P2K8 1649 aaKnown RBP39.23■■■■□ 3.87
SMDT1-201ENST00000331479 GGT6Q6P531 493 aa39.22■■■■□ 3.87
SMDT1-201ENST00000331479 ANKRD50Q9ULJ7 1429 aa39.21■■■■□ 3.87
SMDT1-201ENST00000331479 MADDQ8WXG6 1647 aa39.18■■■■□ 3.86
SMDT1-201ENST00000331479 NAIPQ13075 1403 aa39.16■■■■□ 3.86
SMDT1-201ENST00000331479 RNF17Q9BXT8 1623 aaKnown RBP39.15■■■■□ 3.86
SMDT1-201ENST00000331479 HFM1A2PYH4 1435 aa39.13■■■■□ 3.85
SMDT1-201ENST00000331479 FER1L4A9Z1Z3 1794 aa39.12■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms