RNA–Protein interactions for RNA: ENST00000330560.7

CDCA2-201, Transcript of cell division cycle associated 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCA2, Length 3,731 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA2-201ENST00000330560 NUP155O75694 1391 aa20.52■□□□□ 0.88
CDCA2-201ENST00000330560 THOC2Q8NI27 1593 aaKnown RBP20.51■□□□□ 0.87
CDCA2-201ENST00000330560 CARD11Q9BXL7 1154 aa20.51■□□□□ 0.87
CDCA2-201ENST00000330560 MAGI3Q5TCQ9 1506 aa20.51■□□□□ 0.87
CDCA2-201ENST00000330560 CTTNBP2Q8WZ74 1663 aa20.5■□□□□ 0.87
CDCA2-201ENST00000330560 CARMIL2Q6F5E8 1435 aa20.49■□□□□ 0.87
CDCA2-201ENST00000330560 EHBP1L1Q8N3D4 1523 aa20.48■□□□□ 0.87
CDCA2-201ENST00000330560 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
CDCA2-201ENST00000330560 CFAP43Q8NDM7 1665 aa20.47■□□□□ 0.87
CDCA2-201ENST00000330560 PTPN23Q9H3S7 1636 aa20.47■□□□□ 0.87
CDCA2-201ENST00000330560 CCER2I3L3R5 266 aa20.47■□□□□ 0.87
CDCA2-201ENST00000330560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.46■□□□□ 0.87
CDCA2-201ENST00000330560 SUPT6HQ7KZ85 1726 aaKnown RBP20.46■□□□□ 0.87
CDCA2-201ENST00000330560 ABCA5Q8WWZ7 1642 aa20.46■□□□□ 0.87
CDCA2-201ENST00000330560 KIAA0586Q9BVV6 1533 aa20.42■□□□□ 0.86
CDCA2-201ENST00000330560 TMC1Q8TDI8 760 aa20.41■□□□□ 0.86
CDCA2-201ENST00000330560 GRIN2AQ12879 1464 aa20.4■□□□□ 0.86
CDCA2-201ENST00000330560 DAPK1P53355 1430 aa20.4■□□□□ 0.86
CDCA2-201ENST00000330560 ABCC5O15440 1437 aa20.39■□□□□ 0.85
CDCA2-201ENST00000330560 PTPRGP23470 1445 aa20.39■□□□□ 0.85
CDCA2-201ENST00000330560 HECW1Q76N89 1606 aa20.39■□□□□ 0.85
CDCA2-201ENST00000330560 ANKRD30AQ9BXX3 1397 aa20.39■□□□□ 0.85
CDCA2-201ENST00000330560 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
CDCA2-201ENST00000330560 TSHZ2Q9NRE2 1034 aa20.38■□□□□ 0.85
CDCA2-201ENST00000330560 UGGT2Q9NYU1 1516 aa20.37■□□□□ 0.85
CDCA2-201ENST00000330560 PRKRIP1Q9H875 184 aaPredicted RBP20.36■□□□□ 0.85
CDCA2-201ENST00000330560 KIF7Q2M1P5 1343 aa20.36■□□□□ 0.85
CDCA2-201ENST00000330560 NUP153P49790 1475 aaKnown RBP20.36■□□□□ 0.85
CDCA2-201ENST00000330560 ST20-MTHFSA0A0A6YYL1 179 aa20.35■□□□□ 0.85
CDCA2-201ENST00000330560 CHGAP10645 457 aaKnown RBP20.35■□□□□ 0.85
CDCA2-201ENST00000330560 SAMD9Q5K651 1589 aa20.34■□□□□ 0.85
CDCA2-201ENST00000330560 MIA2Q96PC5 1412 aa20.33■□□□□ 0.84
CDCA2-201ENST00000330560 TROQ12816 1431 aaPredicted RBP20.32■□□□□ 0.84
CDCA2-201ENST00000330560 ADAMTS12P58397 1594 aa20.32■□□□□ 0.84
CDCA2-201ENST00000330560 B4GALNT3Q6L9W6 998 aa20.31■□□□□ 0.84
CDCA2-201ENST00000330560 KDM6BO15054 1643 aa20.3■□□□□ 0.84
CDCA2-201ENST00000330560 DISP1Q96F81 1524 aa20.3■□□□□ 0.84
CDCA2-201ENST00000330560 ANKRD50Q9ULJ7 1429 aa20.3■□□□□ 0.84
CDCA2-201ENST00000330560 CC2D1BQ5T0F9 858 aaKnown RBP20.29■□□□□ 0.84
CDCA2-201ENST00000330560 CCDC7Q96M83 1385 aa20.29■□□□□ 0.84
CDCA2-201ENST00000330560 ARHGEF11O15085 1522 aa20.29■□□□□ 0.84
CDCA2-201ENST00000330560 ANKRD30BQ9BXX2 1392 aa20.28■□□□□ 0.84
CDCA2-201ENST00000330560 USP47Q96K76 1375 aa20.26■□□□□ 0.83
CDCA2-201ENST00000330560 KIF15Q9NS87 1388 aa20.26■□□□□ 0.83
CDCA2-201ENST00000330560 ERICH6Q7L0X2 663 aa20.25■□□□□ 0.83
CDCA2-201ENST00000330560 PBRM1Q86U86 1689 aa20.25■□□□□ 0.83
CDCA2-201ENST00000330560 WDR62O43379 1518 aa20.25■□□□□ 0.83
CDCA2-201ENST00000330560 SYNJ2O15056 1496 aa20.24■□□□□ 0.83
CDCA2-201ENST00000330560 NBPF1Q3BBV0 1214 aa20.23■□□□□ 0.83
CDCA2-201ENST00000330560 CAMSAP2Q08AD1 1489 aa20.22■□□□□ 0.83
CDCA2-201ENST00000330560 NCOA1Q15788 1441 aa20.22■□□□□ 0.83
CDCA2-201ENST00000330560 MYT1Q01538 1121 aa20.22■□□□□ 0.83
CDCA2-201ENST00000330560 EIF4G3O43432 1585 aaKnown RBP20.21■□□□□ 0.83
CDCA2-201ENST00000330560 LRRIQ1Q96JM4 1722 aa20.21■□□□□ 0.83
CDCA2-201ENST00000330560 AFAP1Q8N556 730 aa20.2■□□□□ 0.83
CDCA2-201ENST00000330560 GPATCH8Q9UKJ3 1502 aaKnown RBP20.2■□□□□ 0.82
CDCA2-201ENST00000330560 ROCK2O75116 1388 aaKnown RBP20.2■□□□□ 0.82
CDCA2-201ENST00000330560 KIAA0556O60303 1618 aa20.18■□□□□ 0.82
CDCA2-201ENST00000330560 C9orf84Q5VXU9 1444 aa20.17■□□□□ 0.82
CDCA2-201ENST00000330560 AKNAQ7Z591 1439 aa20.16■□□□□ 0.82
CDCA2-201ENST00000330560 CNTLNQ9NXG0 1405 aa20.15■□□□□ 0.82
CDCA2-201ENST00000330560 RBM19Q9Y4C8 960 aaKnown RBP20.14■□□□□ 0.82
CDCA2-201ENST00000330560 TCOF1Q13428 1488 aaKnown RBP20.14■□□□□ 0.81
CDCA2-201ENST00000330560 RAPGEF6Q8TEU7 1601 aa20.14■□□□□ 0.81
CDCA2-201ENST00000330560 ATP10BO94823 1461 aa20.14■□□□□ 0.81
CDCA2-201ENST00000330560 MAGI1Q96QZ7 1491 aaPredicted RBP20.14■□□□□ 0.81
CDCA2-201ENST00000330560 ROCK1Q13464 1354 aa20.13■□□□□ 0.81
CDCA2-201ENST00000330560 DENND4BO75064 1496 aaPredicted RBP20.13■□□□□ 0.81
CDCA2-201ENST00000330560 EFCAB2Q5VUJ9 269 aa20.12■□□□□ 0.81
CDCA2-201ENST00000330560 KIAA1107Q9UPP5 1409 aa20.12■□□□□ 0.81
CDCA2-201ENST00000330560 KIF3BO15066 747 aa20.11■□□□□ 0.81
CDCA2-201ENST00000330560 RPRD2Q5VT52 1461 aaKnown RBP20.1■□□□□ 0.81
CDCA2-201ENST00000330560 CCDC136Q96JN2 1154 aa20.1■□□□□ 0.81
CDCA2-201ENST00000330560 CEP170Q5SW79 1584 aa20.09■□□□□ 0.81
CDCA2-201ENST00000330560 NPM1P06748 294 aaKnown RBP eCLIP20.09■□□□□ 0.81
CDCA2-201ENST00000330560 KIF14Q15058 1648 aa20.08■□□□□ 0.81
CDCA2-201ENST00000330560 NUTM2DQ5VT03 806 aaPredicted RBP20.08■□□□□ 0.8
CDCA2-201ENST00000330560 CCDC144AA2RUR9 1427 aa20.07■□□□□ 0.8
CDCA2-201ENST00000330560 GGT6Q6P531 493 aa20.06■□□□□ 0.8
CDCA2-201ENST00000330560 SPAG9O60271 1321 aaKnown RBP20.06■□□□□ 0.8
CDCA2-201ENST00000330560 TNNT2P45379 298 aaPredicted RBP20.05■□□□□ 0.8
CDCA2-201ENST00000330560 ARHGAP5Q13017 1502 aa20.03■□□□□ 0.8
CDCA2-201ENST00000330560 PANK3Q9H999 370 aa20.02■□□□□ 0.8
CDCA2-201ENST00000330560 NPM2Q86SE8 214 aaKnown RBP20.01■□□□□ 0.79
CDCA2-201ENST00000330560 PPP4R2Q9NY27 417 aa20.01■□□□□ 0.79
CDCA2-201ENST00000330560 PZPP20742 1482 aa20.01■□□□□ 0.79
CDCA2-201ENST00000330560 SAFB2Q14151 953 aaKnown RBP eCLIP19.98■□□□□ 0.795e-8■■■□□ 18.5
CDCA2-201ENST00000330560 RSPH4AQ5TD94 716 aa19.98■□□□□ 0.79
CDCA2-201ENST00000330560 TMF1P82094 1093 aa19.97■□□□□ 0.79
CDCA2-201ENST00000330560 KNSTRNQ9Y448 316 aa19.97■□□□□ 0.79
CDCA2-201ENST00000330560 ZBED9Q6R2W3 1325 aa19.96■□□□□ 0.79
CDCA2-201ENST00000330560 NUP160Q12769 1436 aa19.96■□□□□ 0.79
CDCA2-201ENST00000330560 DNMT1P26358 1616 aaKnown RBP19.94■□□□□ 0.78
CDCA2-201ENST00000330560 PLIN1O60240 522 aa19.93■□□□□ 0.78
CDCA2-201ENST00000330560 NEUROD2Q15784 382 aa19.93■□□□□ 0.78
CDCA2-201ENST00000330560 PLEKHH2Q8IVE3 1493 aa19.93■□□□□ 0.78
CDCA2-201ENST00000330560 TEX14Q8IWB6 1497 aa19.93■□□□□ 0.78
CDCA2-201ENST00000330560 KDM5BQ9UGL1 1544 aa19.92■□□□□ 0.78
CDCA2-201ENST00000330560 WDR43Q15061 677 aaKnown RBP eCLIP19.92■□□□□ 0.78
CDCA2-201ENST00000330560 PLPPR3Q6T4P5 718 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms