RNA–Protein interactions for RNA: ENST00000330560.7

CDCA2-201, Transcript of cell division cycle associated 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCA2, Length 3,731 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA2-201ENST00000330560 PTBP1P26599 531 aaKnown RBP eCLIP13.34□□□□□ -0.275e-15■■■■■ 94.4
CDCA2-201ENST00000330560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.67■□□□□ 0.261e-6■■■■■ 93.8
CDCA2-201ENST00000330560 HNRNPMP52272 730 aaKnown RBP eCLIP20.68■□□□□ 0.91e-6■■■■■ 43.8
CDCA2-201ENST00000330560 AQRO60306 1485 aaKnown RBP eCLIP21.16■□□□□ 0.989e-8■■■■■ 33.5
CDCA2-201ENST00000330560 NCBP2P52298 156 aaKnown RBP eCLIP14.24□□□□□ -0.134e-8■■■■■ 27.8
CDCA2-201ENST00000330560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.57■□□□□ 0.42e-6■■■■■ 26.8
CDCA2-201ENST00000330560 EFTUD2Q15029 972 aaKnown RBP eCLIP15.68■□□□□ 0.19e-11■■■■□ 23.1
CDCA2-201ENST00000330560 FMR1Q06787 632 aaKnown RBP eCLIP16.97■□□□□ 0.317e-6■■■■□ 21.7
CDCA2-201ENST00000330560 PRPF4O43172 522 aaKnown RBP eCLIP15.32■□□□□ 0.042e-6■■■■□ 21.6
CDCA2-201ENST00000330560 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.44□□□□□ -0.423e-6■■■■□ 20.7
CDCA2-201ENST00000330560 MATR3P43243 847 aaKnown RBP eCLIP16.76■□□□□ 0.273e-6■■■■□ 20.4
CDCA2-201ENST00000330560 YBX3P16989 372 aaKnown RBP eCLIP15.53■□□□□ 0.083e-6■■■■□ 20.4
CDCA2-201ENST00000330560 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.41□□□□□ -0.261e-6■■■□□ 18.6
CDCA2-201ENST00000330560 SAFB2Q14151 953 aaKnown RBP eCLIP19.98■□□□□ 0.795e-8■■■□□ 18.5
CDCA2-201ENST00000330560 KHSRPQ92945 711 aaKnown RBP eCLIP15.32■□□□□ 0.043e-8■■■□□ 18.1
CDCA2-201ENST00000330560 DDX3XO00571 662 aaKnown RBP eCLIP16.17■□□□□ 0.185e-8■■■□□ 15.9
CDCA2-201ENST00000330560 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.01□□□□□ -0.331e-6■■■□□ 15.6
CDCA2-201ENST00000330560 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.08■□□□□ 0.177e-7■■■□□ 15.2
CDCA2-201ENST00000330560 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.78■□□□□ 0.282e-9■■□□□ 14.1
CDCA2-201ENST00000330560 GPKOWQ92917 476 aaPredicted RBP eCLIP17.11■□□□□ 0.331e-6■■□□□ 13.2
CDCA2-201ENST00000330560 TARDBPQ13148 414 aaKnown RBP eCLIP14.24□□□□□ -0.134e-7■■□□□ 12.9
CDCA2-201ENST00000330560 RBM15Q96T37 977 aaKnown RBP eCLIP15.79■□□□□ 0.126e-7■■□□□ 12.9
CDCA2-201ENST00000330560 SF3B4Q15427 424 aaKnown RBP eCLIP13.79□□□□□ -0.24e-6■■□□□ 12.6
CDCA2-201ENST00000330560 SAFBQ15424 915 aaKnown RBP eCLIP17.33■□□□□ 0.375e-7■■□□□ 12.1
CDCA2-201ENST00000330560 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.22□□□□□ -0.132e-6■□□□□ 11.2
CDCA2-201ENST00000330560 XRCC6P12956 609 aaKnown RBP eCLIP18.15■□□□□ 0.58e-6■□□□□ 10.2
CDCA2-201ENST00000330560 SRSF1Q07955 248 aaKnown RBP eCLIP11.28□□□□□ -0.62e-7■□□□□ 9.7
CDCA2-201ENST00000330560 HLTFQ14527 1009 aaKnown RBP eCLIP16.44■□□□□ 0.225e-6■□□□□ 9.5
CDCA2-201ENST00000330560 PPIGQ13427 754 aaKnown RBP eCLIP14.29□□□□□ -0.126e-6■□□□□ 9.4
CDCA2-201ENST00000330560 ZNF622Q969S3 477 aaKnown RBP eCLIP16.96■□□□□ 0.311e-8■□□□□ 8.5
Retrieved 30 of 30 RNA–protein pairs in 8.1 ms