RNA–Protein interactions for RNA: ENST00000323929.7

MRE11-201, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRE11, Length 6,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-201ENST00000323929 TOPBP1Q92547 1522 aa9.9□□□□□ -0.82
MRE11-201ENST00000323929 PRDM2Q13029 1718 aa9.9□□□□□ -0.83
MRE11-201ENST00000323929 CASKIN1Q8WXD9 1431 aa9.9□□□□□ -0.83
MRE11-201ENST00000323929 AQRO60306 1485 aaKnown RBP eCLIP9.89□□□□□ -0.835e-7■■□□□ 13.1
MRE11-201ENST00000323929 MLECQ14165 292 aa9.89□□□□□ -0.83
MRE11-201ENST00000323929 FYCO1Q9BQS8 1478 aa9.89□□□□□ -0.83
MRE11-201ENST00000323929 EIF5BO60841 1220 aaKnown RBP9.88□□□□□ -0.83
MRE11-201ENST00000323929 HSPA5P11021 654 aaKnown RBP9.88□□□□□ -0.83
MRE11-201ENST00000323929 HSP90AA1P07900 732 aaKnown RBP9.88□□□□□ -0.83
MRE11-201ENST00000323929 CCER2I3L3R5 266 aa9.87□□□□□ -0.83
MRE11-201ENST00000323929 KTN1Q86UP2 1357 aaKnown RBP9.87□□□□□ -0.83
MRE11-201ENST00000323929 MYOM3Q5VTT5 1437 aa9.87□□□□□ -0.83
MRE11-201ENST00000323929 HDGFL2Q7Z4V5 671 aaPredicted RBP9.86□□□□□ -0.83
MRE11-201ENST00000323929 CHMP4BQ9H444 224 aaKnown RBP9.86□□□□□ -0.83
MRE11-201ENST00000323929 KIF3BO15066 747 aa9.86□□□□□ -0.83
MRE11-201ENST00000323929 PEG3Q9GZU2 1588 aa9.86□□□□□ -0.83
MRE11-201ENST00000323929 SRPK2P78362 688 aaKnown RBP9.86□□□□□ -0.83
MRE11-201ENST00000323929 CC2D1BQ5T0F9 858 aaKnown RBP9.86□□□□□ -0.83
MRE11-201ENST00000323929 NESP48681 1621 aa9.86□□□□□ -0.83
MRE11-201ENST00000323929 MS4A1P11836 297 aa9.85□□□□□ -0.83
MRE11-201ENST00000323929 HECW1Q76N89 1606 aa9.85□□□□□ -0.83
MRE11-201ENST00000323929 PPM1GO15355 546 aaPredicted RBP9.85□□□□□ -0.83
MRE11-201ENST00000323929 LRRC9Q6ZRR7 1453 aa9.84□□□□□ -0.83
MRE11-201ENST00000323929 EHBP1L1Q8N3D4 1523 aa9.84□□□□□ -0.83
MRE11-201ENST00000323929 CUL7Q14999 1698 aa9.84□□□□□ -0.84
MRE11-201ENST00000323929 POLA1P09884 1462 aaPredicted RBP9.83□□□□□ -0.84
MRE11-201ENST00000323929 WASHC2CQ9Y4E1 1318 aa9.83□□□□□ -0.84
MRE11-201ENST00000323929 MORC1Q86VD1 984 aa9.83□□□□□ -0.84
MRE11-201ENST00000323929 SYNJ2O15056 1496 aa9.83□□□□□ -0.84
MRE11-201ENST00000323929 CCDC144AA2RUR9 1427 aa9.83□□□□□ -0.84
MRE11-201ENST00000323929 FGD6Q6ZV73 1430 aa9.83□□□□□ -0.84
MRE11-201ENST00000323929 RALBP1Q15311 655 aa9.83□□□□□ -0.84
MRE11-201ENST00000323929 FOXD1Q16676 465 aa9.82□□□□□ -0.84
MRE11-201ENST00000323929 FTSJ3Q8IY81 847 aaKnown RBP9.82□□□□□ -0.84
MRE11-201ENST00000323929 SNAPC4Q5SXM2 1469 aa9.82□□□□□ -0.84
MRE11-201ENST00000323929 EID1Q9Y6B2 187 aa9.82□□□□□ -0.84
MRE11-201ENST00000323929 UNC13AQ9UPW8 1703 aa9.81□□□□□ -0.84
MRE11-201ENST00000323929 A0A0G2JS52 829 aa9.81□□□□□ -0.84
MRE11-201ENST00000323929 DDRGK1Q96HY6 314 aa9.81□□□□□ -0.84
MRE11-201ENST00000323929 ANP32BQ92688 251 aaKnown RBP9.81□□□□□ -0.84
MRE11-201ENST00000323929 NCOA2Q15596 1464 aa9.8□□□□□ -0.84
MRE11-201ENST00000323929 PRXQ9BXM0 1461 aa9.8□□□□□ -0.84
MRE11-201ENST00000323929 ABCA10Q8WWZ4 1543 aa9.8□□□□□ -0.84
MRE11-201ENST00000323929 CASC1Q6TDU7 716 aa9.8□□□□□ -0.84
MRE11-201ENST00000323929 PLEKHG5O94827 1062 aa9.79□□□□□ -0.84
MRE11-201ENST00000323929 U2SURPO15042 1029 aaKnown RBP9.79□□□□□ -0.84
MRE11-201ENST00000323929 DHX57Q6P158 1386 aaKnown RBP9.79□□□□□ -0.84
MRE11-201ENST00000323929 PRG4Q92954 1404 aaPredicted RBP9.79□□□□□ -0.84
MRE11-201ENST00000323929 LMOD2Q6P5Q4 547 aa9.79□□□□□ -0.84
MRE11-201ENST00000323929 ARHGAP5Q13017 1502 aa9.78□□□□□ -0.84
MRE11-201ENST00000323929 PLEKHH2Q8IVE3 1493 aa9.78□□□□□ -0.84
MRE11-201ENST00000323929 STK26Q9P289 416 aa9.78□□□□□ -0.84
MRE11-201ENST00000323929 TNNT2P45379 298 aaPredicted RBP9.78□□□□□ -0.84
MRE11-201ENST00000323929 LAS1LQ9Y4W2 734 aaKnown RBP9.78□□□□□ -0.84
MRE11-201ENST00000323929 ARAP1Q96P48 1450 aa9.77□□□□□ -0.85
MRE11-201ENST00000323929 IRX6P78412 446 aaPredicted RBP9.77□□□□□ -0.85
MRE11-201ENST00000323929 BECN1Q14457 450 aa9.77□□□□□ -0.85
MRE11-201ENST00000323929 CALD1Q05682 793 aaKnown RBP9.77□□□□□ -0.85
MRE11-201ENST00000323929 TERF2IPQ9NYB0 399 aa9.76□□□□□ -0.85
MRE11-201ENST00000323929 L3MBTL2Q969R5 705 aa9.76□□□□□ -0.85
MRE11-201ENST00000323929 PHLDB1Q86UU1 1377 aa9.75□□□□□ -0.85
MRE11-201ENST00000323929 NEUROD2Q15784 382 aa9.75□□□□□ -0.85
MRE11-201ENST00000323929 PPP4R2Q9NY27 417 aa9.75□□□□□ -0.85
MRE11-201ENST00000323929 SAFB2Q14151 953 aaKnown RBP eCLIP9.75□□□□□ -0.85
MRE11-201ENST00000323929 BIVM-ERCC5R4GMW8 1640 aa9.75□□□□□ -0.85
MRE11-201ENST00000323929 SUPT6HQ7KZ85 1726 aaKnown RBP9.74□□□□□ -0.85
MRE11-201ENST00000323929 IQGAP2Q13576 1575 aa9.73□□□□□ -0.85
MRE11-201ENST00000323929 STAC3Q96MF2 364 aa9.73□□□□□ -0.85
MRE11-201ENST00000323929 KIF15Q9NS87 1388 aa9.73□□□□□ -0.85
MRE11-201ENST00000323929 RTF1Q92541 710 aaKnown RBP9.73□□□□□ -0.85
MRE11-201ENST00000323929 SUPT16HQ9Y5B9 1047 aaKnown RBP9.73□□□□□ -0.85
MRE11-201ENST00000323929 MIA2Q96PC5 1412 aa9.73□□□□□ -0.85
MRE11-201ENST00000323929 CYB5RLQ6IPT4 315 aa9.73□□□□□ -0.85
MRE11-201ENST00000323929 KIAA0586Q9BVV6 1533 aa9.73□□□□□ -0.85
MRE11-201ENST00000323929 TIAM1Q13009 1591 aa9.73□□□□□ -0.85
MRE11-201ENST00000323929 VGFO15240 615 aaPredicted RBP9.73□□□□□ -0.85
MRE11-201ENST00000323929 RRBP1Q9P2E9 1410 aaKnown RBP9.72□□□□□ -0.85
MRE11-201ENST00000323929 MAGI1Q96QZ7 1491 aaPredicted RBP9.72□□□□□ -0.85
MRE11-201ENST00000323929 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.71□□□□□ -0.86
MRE11-201ENST00000323929 CHMP4AQ9BY43 222 aa9.7□□□□□ -0.86
MRE11-201ENST00000323929 FRAT1Q92837 279 aaPredicted RBP9.7□□□□□ -0.86
MRE11-201ENST00000323929 TROQ12816 1431 aaPredicted RBP9.69□□□□□ -0.86
MRE11-201ENST00000323929 ANKRD50Q9ULJ7 1429 aa9.69□□□□□ -0.86
MRE11-201ENST00000323929 FAM69CQ0P6D2 419 aa9.69□□□□□ -0.86
MRE11-201ENST00000323929 CFAP44Q96MT7 982 aa9.69□□□□□ -0.86
MRE11-201ENST00000323929 EVC2Q86UK5 1308 aa9.68□□□□□ -0.86
MRE11-201ENST00000323929 ARXQ96QS3 562 aa9.68□□□□□ -0.86
MRE11-201ENST00000323929 IPO8O15397 1037 aaKnown RBP9.68□□□□□ -0.86
MRE11-201ENST00000323929 PAK3O75914 559 aaPredicted RBP9.68□□□□□ -0.86
MRE11-201ENST00000323929 ERICH6BQ5W0A0 696 aa9.68□□□□□ -0.86
MRE11-201ENST00000323929 NCLP19338 710 aaKnown RBP9.67□□□□□ -0.86
MRE11-201ENST00000323929 USP47Q96K76 1375 aa9.67□□□□□ -0.86
MRE11-201ENST00000323929 LMOD3Q0VAK6 560 aa9.67□□□□□ -0.86
MRE11-201ENST00000323929 ANP32EQ9BTT0 268 aa9.66□□□□□ -0.86
MRE11-201ENST00000323929 MYBBP1AQ9BQG0 1328 aaKnown RBP9.66□□□□□ -0.86
MRE11-201ENST00000323929 OS9Q13438 667 aaPredicted RBP9.66□□□□□ -0.86
MRE11-201ENST00000323929 NLRP13Q86W25 1043 aa9.65□□□□□ -0.86
MRE11-201ENST00000323929 U2AF1L5P0DN76 240 aaPredicted RBP9.65□□□□□ -0.86
MRE11-201ENST00000323929 U2AF1Q01081 240 aaKnown RBP eCLIP9.65□□□□□ -0.862e-8■■■■■ 32.6
MRE11-201ENST00000323929 GRIN2AQ12879 1464 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms