RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 PRKRIP1Q9H875 184 aaPredicted RBP20.12■□□□□ 0.81
VARS2-201ENST00000321897 FGD6Q6ZV73 1430 aa20.11■□□□□ 0.81
VARS2-201ENST00000321897 RRBP1Q9P2E9 1410 aaKnown RBP20.09■□□□□ 0.81
VARS2-201ENST00000321897 WASHC2AQ641Q2 1341 aa20.09■□□□□ 0.81
VARS2-201ENST00000321897 PPM1GO15355 546 aaPredicted RBP20.08■□□□□ 0.81
VARS2-201ENST00000321897 TOP2BQ02880 1626 aa20.07■□□□□ 0.8
VARS2-201ENST00000321897 FANCIQ9NVI1 1328 aa20.06■□□□□ 0.8
VARS2-201ENST00000321897 GAPVD1Q14C86 1478 aa20.06■□□□□ 0.8
VARS2-201ENST00000321897 NUTM2DQ5VT03 806 aaPredicted RBP20.06■□□□□ 0.8
VARS2-201ENST00000321897 FRAT1Q92837 279 aaPredicted RBP20.05■□□□□ 0.8
VARS2-201ENST00000321897 NBPF8Q3BBV2 869 aa20.03■□□□□ 0.8
VARS2-201ENST00000321897 PLIN1O60240 522 aa20.02■□□□□ 0.8
VARS2-201ENST00000321897 PAK3O75914 559 aaPredicted RBP20.02■□□□□ 0.8
VARS2-201ENST00000321897 WDR97A6NE52 1622 aa20.02■□□□□ 0.8
VARS2-201ENST00000321897 GLIPR1L2Q4G1C9 344 aa20.02■□□□□ 0.8
VARS2-201ENST00000321897 GGT6Q6P531 493 aa20.02■□□□□ 0.8
VARS2-201ENST00000321897 IL27Q8NEV9 243 aa20.02■□□□□ 0.79
VARS2-201ENST00000321897 IPO9Q96P70 1041 aaKnown RBP20.02■□□□□ 0.79
VARS2-201ENST00000321897 ROCK2O75116 1388 aaKnown RBP20.01■□□□□ 0.79
VARS2-201ENST00000321897 KIF7Q2M1P5 1343 aa19.97■□□□□ 0.79
VARS2-201ENST00000321897 ARID4BQ4LE39 1312 aaPredicted RBP19.97■□□□□ 0.79
VARS2-201ENST00000321897 NCOA2Q15596 1464 aa19.97■□□□□ 0.79
VARS2-201ENST00000321897 CCDC146Q8IYE0 955 aa19.97■□□□□ 0.79
VARS2-201ENST00000321897 ERICH3Q5RHP9 1530 aa19.97■□□□□ 0.79
VARS2-201ENST00000321897 MYOM3Q5VTT5 1437 aa19.96■□□□□ 0.79
VARS2-201ENST00000321897 C11orf95C9JLR9 678 aaPredicted RBP19.96■□□□□ 0.79
VARS2-201ENST00000321897 TMF1P82094 1093 aa19.96■□□□□ 0.79
VARS2-201ENST00000321897 SLC4A3P48751 1232 aa19.95■□□□□ 0.78
VARS2-201ENST00000321897 ANKRD30AQ9BXX3 1397 aa19.95■□□□□ 0.78
VARS2-201ENST00000321897 POLA1P09884 1462 aaPredicted RBP19.94■□□□□ 0.78
VARS2-201ENST00000321897 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.93■□□□□ 0.78
VARS2-201ENST00000321897 STK26Q9P289 416 aa19.93■□□□□ 0.78
VARS2-201ENST00000321897 NAP1L5Q96NT1 182 aaPredicted RBP19.92■□□□□ 0.78
VARS2-201ENST00000321897 RCAN3Q9UKA8 241 aa19.92■□□□□ 0.78
VARS2-201ENST00000321897 DDRGK1Q96HY6 314 aa19.92■□□□□ 0.78
VARS2-201ENST00000321897 ESF1Q9H501 851 aaKnown RBP19.92■□□□□ 0.78
VARS2-201ENST00000321897 UNC13AQ9UPW8 1703 aa19.92■□□□□ 0.78
VARS2-201ENST00000321897 UACAQ9BZF9 1416 aa19.92■□□□□ 0.78
VARS2-201ENST00000321897 USP47Q96K76 1375 aa19.91■□□□□ 0.78
VARS2-201ENST00000321897 KIF3BO15066 747 aa19.91■□□□□ 0.78
VARS2-201ENST00000321897 MLECQ14165 292 aa19.9■□□□□ 0.78
VARS2-201ENST00000321897 CASKIN1Q8WXD9 1431 aa19.9■□□□□ 0.78
VARS2-201ENST00000321897 U2SURPO15042 1029 aaKnown RBP19.89■□□□□ 0.78
VARS2-201ENST00000321897 NUDCQ9Y266 331 aa19.89■□□□□ 0.78
VARS2-201ENST00000321897 PANK3Q9H999 370 aa19.89■□□□□ 0.77
VARS2-201ENST00000321897 CARMIL2Q6F5E8 1435 aa19.88■□□□□ 0.77
VARS2-201ENST00000321897 ERICH6BQ5W0A0 696 aa19.87■□□□□ 0.77
VARS2-201ENST00000321897 EXOC6Q8TAG9 804 aa19.87■□□□□ 0.77
VARS2-201ENST00000321897 SOX12O15370 315 aa19.86■□□□□ 0.77
VARS2-201ENST00000321897 TIAM1Q13009 1591 aa19.86■□□□□ 0.77
VARS2-201ENST00000321897 CCDC7Q96M83 1385 aa19.86■□□□□ 0.77
VARS2-201ENST00000321897 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
VARS2-201ENST00000321897 HSP90AA1P07900 732 aaKnown RBP19.85■□□□□ 0.77
VARS2-201ENST00000321897 UPF2Q9HAU5 1272 aaKnown RBP19.85■□□□□ 0.77
VARS2-201ENST00000321897 KTN1Q86UP2 1357 aaKnown RBP19.84■□□□□ 0.77
VARS2-201ENST00000321897 NBPF1Q3BBV0 1214 aa19.84■□□□□ 0.77
VARS2-201ENST00000321897 RRP7AQ9Y3A4 280 aaKnown RBP19.83■□□□□ 0.76
VARS2-201ENST00000321897 CC2D2AQ9P2K1 1620 aa19.82■□□□□ 0.76
VARS2-201ENST00000321897 SPRYD3Q8NCJ5 442 aa19.81■□□□□ 0.76
VARS2-201ENST00000321897 CLUAP1Q96AJ1 413 aa19.81■□□□□ 0.76
VARS2-201ENST00000321897 CDCA7LQ96GN5 454 aa19.8■□□□□ 0.76
VARS2-201ENST00000321897 PRG4Q92954 1404 aaPredicted RBP19.8■□□□□ 0.76
VARS2-201ENST00000321897 TRAK1Q9UPV9 953 aa19.79■□□□□ 0.76
VARS2-201ENST00000321897 EFCAB2Q5VUJ9 269 aa19.79■□□□□ 0.76
VARS2-201ENST00000321897 NLRP13Q86W25 1043 aa19.78■□□□□ 0.76
VARS2-201ENST00000321897 BCL2L13Q9BXK5 485 aa19.78■□□□□ 0.76
VARS2-201ENST00000321897 ZBTB7CA1YPR0 619 aa19.78■□□□□ 0.76
VARS2-201ENST00000321897 CDK13Q14004 1512 aaKnown RBP19.78■□□□□ 0.76
VARS2-201ENST00000321897 CDCA8Q53HL2 280 aa19.77■□□□□ 0.76
VARS2-201ENST00000321897 NAIPQ13075 1403 aa19.77■□□□□ 0.76
VARS2-201ENST00000321897 SLKQ9H2G2 1235 aaPredicted RBP19.77■□□□□ 0.76
VARS2-201ENST00000321897 POGKQ9P215 609 aa19.76■□□□□ 0.75
VARS2-201ENST00000321897 ZBED9Q6R2W3 1325 aa19.76■□□□□ 0.75
VARS2-201ENST00000321897 BRPF3Q9ULD4 1205 aa19.76■□□□□ 0.75
VARS2-201ENST00000321897 PCF11O94913 1555 aaKnown RBP19.76■□□□□ 0.75
VARS2-201ENST00000321897 SRPK2P78362 688 aaKnown RBP19.76■□□□□ 0.75
VARS2-201ENST00000321897 MORC1Q86VD1 984 aa19.76■□□□□ 0.75
VARS2-201ENST00000321897 FYCO1Q9BQS8 1478 aa19.74■□□□□ 0.75
VARS2-201ENST00000321897 GZF1Q9H116 711 aaPredicted RBP19.74■□□□□ 0.75
VARS2-201ENST00000321897 PRDM2Q13029 1718 aa19.74■□□□□ 0.75
VARS2-201ENST00000321897 RALBP1Q15311 655 aa19.74■□□□□ 0.75
VARS2-201ENST00000321897 PTPRGP23470 1445 aa19.73■□□□□ 0.75
VARS2-201ENST00000321897 AFAP1Q8N556 730 aa19.73■□□□□ 0.75
VARS2-201ENST00000321897 PTPRKQ15262 1439 aa19.73■□□□□ 0.75
VARS2-201ENST00000321897 PDE4AP27815 886 aa19.73■□□□□ 0.75
VARS2-201ENST00000321897 FTSJ3Q8IY81 847 aaKnown RBP19.72■□□□□ 0.75
VARS2-201ENST00000321897 SPAG9O60271 1321 aaKnown RBP19.72■□□□□ 0.75
VARS2-201ENST00000321897 HMGXB3Q12766 1538 aa19.72■□□□□ 0.75
VARS2-201ENST00000321897 SKAP1Q86WV1 359 aa19.72■□□□□ 0.75
VARS2-201ENST00000321897 HFM1A2PYH4 1435 aa19.72■□□□□ 0.75
VARS2-201ENST00000321897 C14orf37Q86TY3 774 aa19.71■□□□□ 0.75
VARS2-201ENST00000321897 AKNAQ7Z591 1439 aa19.71■□□□□ 0.75
VARS2-201ENST00000321897 CCDC144AA2RUR9 1427 aa19.71■□□□□ 0.75
VARS2-201ENST00000321897 KIF15Q9NS87 1388 aa19.7■□□□□ 0.74
VARS2-201ENST00000321897 ANP32BQ92688 251 aaKnown RBP19.7■□□□□ 0.74
VARS2-201ENST00000321897 U2AF1L5P0DN76 240 aaPredicted RBP19.7■□□□□ 0.74
VARS2-201ENST00000321897 U2AF1Q01081 240 aaKnown RBP eCLIP19.7■□□□□ 0.74
VARS2-201ENST00000321897 CFAP53Q96M91 514 aa19.7■□□□□ 0.74
VARS2-201ENST00000321897 MYBBP1AQ9BQG0 1328 aaKnown RBP19.69■□□□□ 0.74
VARS2-201ENST00000321897 CNTLNQ9NXG0 1405 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms