RNA–Protein interactions for RNA: ENST00000320159.2

ZNF48-201, Transcript of zinc finger protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF48, Length 3,234 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-201ENST00000320159 PRG4Q92954 1404 aaPredicted RBP28.65■■■□□ 2.18
ZNF48-201ENST00000320159 IQGAP2Q13576 1575 aa28.64■■■□□ 2.18
ZNF48-201ENST00000320159 RBM19Q9Y4C8 960 aaKnown RBP28.64■■■□□ 2.18
ZNF48-201ENST00000320159 PKD2Q13563 968 aa28.56■■■□□ 2.16
ZNF48-201ENST00000320159 PRKRIP1Q9H875 184 aaPredicted RBP28.55■■■□□ 2.16
ZNF48-201ENST00000320159 HECW1Q76N89 1606 aa28.54■■■□□ 2.16
ZNF48-201ENST00000320159 ABCC5O15440 1437 aa28.54■■■□□ 2.16
ZNF48-201ENST00000320159 KIF7Q2M1P5 1343 aa28.53■■■□□ 2.16
ZNF48-201ENST00000320159 PLB1Q6P1J6 1458 aa28.53■■■□□ 2.16
ZNF48-201ENST00000320159 PBRM1Q86U86 1689 aa28.53■■■□□ 2.16
ZNF48-201ENST00000320159 DAPK1P53355 1430 aa28.53■■■□□ 2.16
ZNF48-201ENST00000320159 B4GALNT3Q6L9W6 998 aa28.53■■■□□ 2.16
ZNF48-201ENST00000320159 SALL2Q9Y467 1007 aaPredicted RBP28.52■■■□□ 2.16
ZNF48-201ENST00000320159 CDK11AQ9UQ88 783 aaPredicted RBP28.52■■■□□ 2.16
ZNF48-201ENST00000320159 CCDC7Q96M83 1385 aa28.5■■■□□ 2.15
ZNF48-201ENST00000320159 ARHGEF11O15085 1522 aa28.49■■■□□ 2.15
ZNF48-201ENST00000320159 WDR62O43379 1518 aa28.48■■■□□ 2.15
ZNF48-201ENST00000320159 ANKRD30BQ9BXX2 1392 aa28.48■■■□□ 2.15
ZNF48-201ENST00000320159 ADAMTS12P58397 1594 aa28.47■■■□□ 2.15
ZNF48-201ENST00000320159 NUP153P49790 1475 aaKnown RBP28.47■■■□□ 2.15
ZNF48-201ENST00000320159 MRC2Q9UBG0 1479 aa28.47■■■□□ 2.15
ZNF48-201ENST00000320159 HNRNPMP52272 730 aaKnown RBP eCLIP28.46■■■□□ 2.15
ZNF48-201ENST00000320159 TCOF1Q13428 1488 aaKnown RBP28.44■■■□□ 2.14
ZNF48-201ENST00000320159 DISP1Q96F81 1524 aa28.44■■■□□ 2.14
ZNF48-201ENST00000320159 JPH4Q96JJ6 628 aa28.43■■■□□ 2.14
ZNF48-201ENST00000320159 ERCC6Q03468 1493 aa28.42■■■□□ 2.14
ZNF48-201ENST00000320159 RGL3Q3MIN7 710 aa28.42■■■□□ 2.14
ZNF48-201ENST00000320159 ANP32EQ9BTT0 268 aa28.42■■■□□ 2.14
ZNF48-201ENST00000320159 CNTLNQ9NXG0 1405 aa28.42■■■□□ 2.14
ZNF48-201ENST00000320159 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.41■■■□□ 2.14
ZNF48-201ENST00000320159 MIA2Q96PC5 1412 aa28.39■■■□□ 2.13
ZNF48-201ENST00000320159 DCAF11Q8TEB1 546 aa28.33■■■□□ 2.13
ZNF48-201ENST00000320159 PLEKHD1A6NEE1 506 aa28.33■■■□□ 2.13
ZNF48-201ENST00000320159 NUP155O75694 1391 aa28.32■■■□□ 2.12
ZNF48-201ENST00000320159 GCC2Q8IWJ2 1684 aa28.32■■■□□ 2.12
ZNF48-201ENST00000320159 MSH5O43196 834 aa28.31■■■□□ 2.12
ZNF48-201ENST00000320159 KIAA0586Q9BVV6 1533 aa28.31■■■□□ 2.12
ZNF48-201ENST00000320159 CARD11Q9BXL7 1154 aa28.31■■■□□ 2.12
ZNF48-201ENST00000320159 GRIN2AQ12879 1464 aa28.31■■■□□ 2.12
ZNF48-201ENST00000320159 NCOA1Q15788 1441 aa28.31■■■□□ 2.12
ZNF48-201ENST00000320159 RPRD2Q5VT52 1461 aaKnown RBP28.3■■■□□ 2.12
ZNF48-201ENST00000320159 MYT1Q01538 1121 aa28.3■■■□□ 2.12
ZNF48-201ENST00000320159 KIAA0556O60303 1618 aa28.29■■■□□ 2.12
ZNF48-201ENST00000320159 CAMSAP2Q08AD1 1489 aa28.28■■■□□ 2.12
ZNF48-201ENST00000320159 USP47Q96K76 1375 aa28.27■■■□□ 2.12
ZNF48-201ENST00000320159 KIF14Q15058 1648 aa28.27■■■□□ 2.12
ZNF48-201ENST00000320159 ST20-MTHFSA0A0A6YYL1 179 aa28.26■■■□□ 2.11
ZNF48-201ENST00000320159 TEX14Q8IWB6 1497 aa28.26■■■□□ 2.11
ZNF48-201ENST00000320159 IFT140Q96RY7 1462 aa28.25■■■□□ 2.11
ZNF48-201ENST00000320159 TSPY4P0CV99 314 aa28.24■■■□□ 2.11
ZNF48-201ENST00000320159 TSPY10P0CW01 314 aa28.24■■■□□ 2.11
ZNF48-201ENST00000320159 AKNAQ7Z591 1439 aa28.24■■■□□ 2.11
ZNF48-201ENST00000320159 PZPP20742 1482 aa28.23■■■□□ 2.11
ZNF48-201ENST00000320159 RAPGEF6Q8TEU7 1601 aa28.22■■■□□ 2.11
ZNF48-201ENST00000320159 GPATCH8Q9UKJ3 1502 aaKnown RBP28.22■■■□□ 2.11
ZNF48-201ENST00000320159 TROQ12816 1431 aaPredicted RBP28.22■■■□□ 2.11
ZNF48-201ENST00000320159 EIF4G3O43432 1585 aaKnown RBP28.21■■■□□ 2.11
ZNF48-201ENST00000320159 TMC1Q8TDI8 760 aa28.19■■■□□ 2.1
ZNF48-201ENST00000320159 ROCK1Q13464 1354 aa28.18■■■□□ 2.1
ZNF48-201ENST00000320159 ANKRD50Q9ULJ7 1429 aa28.17■■■□□ 2.1
ZNF48-201ENST00000320159 DNMT1P26358 1616 aaKnown RBP28.17■■■□□ 2.1
ZNF48-201ENST00000320159 ANKRD30AQ9BXX3 1397 aa28.15■■■□□ 2.1
ZNF48-201ENST00000320159 SPATA31E1Q6ZUB1 1445 aa28.14■■■□□ 2.09
ZNF48-201ENST00000320159 PPP4R2Q9NY27 417 aa28.13■■■□□ 2.09
ZNF48-201ENST00000320159 NBPF1Q3BBV0 1214 aa28.13■■■□□ 2.09
ZNF48-201ENST00000320159 CEP170Q5SW79 1584 aa28.13■■■□□ 2.09
ZNF48-201ENST00000320159 ZBED9Q6R2W3 1325 aa28.11■■■□□ 2.09
ZNF48-201ENST00000320159 KIAA1107Q9UPP5 1409 aa28.1■■■□□ 2.09
ZNF48-201ENST00000320159 ERICH6Q7L0X2 663 aa28.07■■■□□ 2.08
ZNF48-201ENST00000320159 CC2D1BQ5T0F9 858 aaKnown RBP28.07■■■□□ 2.08
ZNF48-201ENST00000320159 DHX29Q7Z478 1369 aaKnown RBP28.06■■■□□ 2.08
ZNF48-201ENST00000320159 CARMIL2Q6F5E8 1435 aa28.05■■■□□ 2.08
ZNF48-201ENST00000320159 BCORL1Q5H9F3 1711 aa28.04■■■□□ 2.08
ZNF48-201ENST00000320159 KIF15Q9NS87 1388 aa28.03■■■□□ 2.08
ZNF48-201ENST00000320159 C9orf84Q5VXU9 1444 aa28.03■■■□□ 2.08
ZNF48-201ENST00000320159 ATP10BO94823 1461 aa28.01■■■□□ 2.07
ZNF48-201ENST00000320159 CCDC136Q96JN2 1154 aa27.99■■■□□ 2.07
ZNF48-201ENST00000320159 SYNJ2O15056 1496 aa27.99■■■□□ 2.07
ZNF48-201ENST00000320159 ROCK2O75116 1388 aaKnown RBP27.98■■■□□ 2.07
ZNF48-201ENST00000320159 PNISRQ8TF01 805 aaKnown RBP27.96■■■□□ 2.07
ZNF48-201ENST00000320159 SKAP1Q86WV1 359 aa27.93■■■□□ 2.06
ZNF48-201ENST00000320159 MAGI1Q96QZ7 1491 aaPredicted RBP27.93■■■□□ 2.06
ZNF48-201ENST00000320159 NUDCQ9Y266 331 aa27.92■■■□□ 2.06
ZNF48-201ENST00000320159 PTPRGP23470 1445 aa27.92■■■□□ 2.06
ZNF48-201ENST00000320159 SENP3Q9H4L4 574 aaPredicted RBP27.92■■■□□ 2.06
ZNF48-201ENST00000320159 MYT1LQ9UL68 1186 aa27.92■■■□□ 2.06
ZNF48-201ENST00000320159 CDCA7LQ96GN5 454 aa27.9■■■□□ 2.06
ZNF48-201ENST00000320159 PLIN1O60240 522 aa27.88■■■□□ 2.05
ZNF48-201ENST00000320159 NBR1Q14596 966 aa27.88■■■□□ 2.05
ZNF48-201ENST00000320159 NPM2Q86SE8 214 aaKnown RBP27.86■■■□□ 2.05
ZNF48-201ENST00000320159 MBD5Q9P267 1494 aa27.82■■■□□ 2.04
ZNF48-201ENST00000320159 EXOC6Q8TAG9 804 aa27.82■■■□□ 2.04
ZNF48-201ENST00000320159 PAK3O75914 559 aaPredicted RBP27.8■■■□□ 2.04
ZNF48-201ENST00000320159 CDC42BPAQ5VT25 1732 aa27.79■■■□□ 2.04
ZNF48-201ENST00000320159 PANK3Q9H999 370 aa27.79■■■□□ 2.04
ZNF48-201ENST00000320159 ITSN2Q9NZM3 1697 aa27.78■■■□□ 2.04
ZNF48-201ENST00000320159 ABCC10Q5T3U5 1492 aa27.77■■■□□ 2.04
ZNF48-201ENST00000320159 NUP160Q12769 1436 aa27.77■■■□□ 2.04
ZNF48-201ENST00000320159 KDM5CP41229 1560 aa27.76■■■□□ 2.04
ZNF48-201ENST00000320159 CCDC144AA2RUR9 1427 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms