RNA–Protein interactions for RNA: ENST00000319190.9

TTC7A-201, Transcript of tetratricopeptide repeat domain 7A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TTC7A, Length 5,157 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-201ENST00000319190 KIF3BO15066 747 aa26.96■■□□□ 1.91
TTC7A-201ENST00000319190 FRAT1Q92837 279 aaPredicted RBP26.96■■□□□ 1.91
TTC7A-201ENST00000319190 ROCK2O75116 1388 aaKnown RBP26.93■■□□□ 1.9
TTC7A-201ENST00000319190 SPAG9O60271 1321 aaKnown RBP26.93■■□□□ 1.9
TTC7A-201ENST00000319190 STK26Q9P289 416 aa26.92■■□□□ 1.9
TTC7A-201ENST00000319190 MS4A1P11836 297 aa26.92■■□□□ 1.9
TTC7A-201ENST00000319190 CHMP4BQ9H444 224 aaKnown RBP26.9■■□□□ 1.9
TTC7A-201ENST00000319190 KTN1Q86UP2 1357 aaKnown RBP26.89■■□□□ 1.9
TTC7A-201ENST00000319190 L3MBTL2Q969R5 705 aa26.89■■□□□ 1.89
TTC7A-201ENST00000319190 ARXQ96QS3 562 aa26.88■■□□□ 1.89
TTC7A-201ENST00000319190 HDGFL2Q7Z4V5 671 aaPredicted RBP26.85■■□□□ 1.89
TTC7A-201ENST00000319190 EIF5BO60841 1220 aaKnown RBP26.83■■□□□ 1.89
TTC7A-201ENST00000319190 SOX12O15370 315 aa26.83■■□□□ 1.88
TTC7A-201ENST00000319190 CASC1Q6TDU7 716 aa26.82■■□□□ 1.88
TTC7A-201ENST00000319190 IGF1RP08069 1367 aa26.81■■□□□ 1.88
TTC7A-201ENST00000319190 RGS3P49796 1198 aa26.81■■□□□ 1.88
TTC7A-201ENST00000319190 FGD5Q6ZNL6 1462 aa26.81■■□□□ 1.88
TTC7A-201ENST00000319190 PTPRGP23470 1445 aa26.81■■□□□ 1.88
TTC7A-201ENST00000319190 RALBP1Q15311 655 aa26.79■■□□□ 1.88
TTC7A-201ENST00000319190 NCAPD3P42695 1498 aa26.79■■□□□ 1.88
TTC7A-201ENST00000319190 GAPVD1Q14C86 1478 aa26.77■■□□□ 1.88
TTC7A-201ENST00000319190 WASHC2CQ9Y4E1 1318 aa26.76■■□□□ 1.88
TTC7A-201ENST00000319190 EIF3AQ14152 1382 aaKnown RBP26.76■■□□□ 1.87
TTC7A-201ENST00000319190 B4GALNT3Q6L9W6 998 aa26.75■■□□□ 1.87
TTC7A-201ENST00000319190 GOLGA6L22H0YM25 854 aa26.73■■□□□ 1.87
TTC7A-201ENST00000319190 NCLP19338 710 aaKnown RBP26.71■■□□□ 1.87
TTC7A-201ENST00000319190 ANP32EQ9BTT0 268 aa26.69■■□□□ 1.86
TTC7A-201ENST00000319190 RAD54L2Q9Y4B4 1467 aa26.69■■□□□ 1.86
TTC7A-201ENST00000319190 DHX57Q6P158 1386 aaKnown RBP26.69■■□□□ 1.86
TTC7A-201ENST00000319190 U2AF1L5P0DN76 240 aaPredicted RBP26.68■■□□□ 1.86
TTC7A-201ENST00000319190 U2AF1Q01081 240 aaKnown RBP eCLIP26.68■■□□□ 1.86
TTC7A-201ENST00000319190 RTF1Q92541 710 aaKnown RBP26.65■■□□□ 1.86
TTC7A-201ENST00000319190 OS9Q13438 667 aaPredicted RBP26.64■■□□□ 1.85
TTC7A-201ENST00000319190 CCDC144AA2RUR9 1427 aa26.62■■□□□ 1.85
TTC7A-201ENST00000319190 TERF2IPQ9NYB0 399 aa26.62■■□□□ 1.85
TTC7A-201ENST00000319190 NLRP13Q86W25 1043 aa26.59■■□□□ 1.85
TTC7A-201ENST00000319190 EID1Q9Y6B2 187 aa26.58■■□□□ 1.85
TTC7A-201ENST00000319190 PAK3O75914 559 aaPredicted RBP26.58■■□□□ 1.85
TTC7A-201ENST00000319190 CALD1Q05682 793 aaKnown RBP26.58■■□□□ 1.85
TTC7A-201ENST00000319190 OSCARQ8IYS5 282 aa26.57■■□□□ 1.84
TTC7A-201ENST00000319190 NUTM2DQ5VT03 806 aaPredicted RBP26.56■■□□□ 1.84
TTC7A-201ENST00000319190 IPO8O15397 1037 aaKnown RBP26.56■■□□□ 1.84
TTC7A-201ENST00000319190 RCAN3Q9UKA8 241 aa26.56■■□□□ 1.84
TTC7A-201ENST00000319190 ST20-MTHFSA0A0A6YYL1 179 aa26.53■■□□□ 1.84
TTC7A-201ENST00000319190 ERICH6BQ5W0A0 696 aa26.53■■□□□ 1.84
TTC7A-201ENST00000319190 TRAK1Q9UPV9 953 aa26.52■■□□□ 1.84
TTC7A-201ENST00000319190 NPHP1O15259 732 aa26.51■■□□□ 1.83
TTC7A-201ENST00000319190 CYB5RLQ6IPT4 315 aa26.51■■□□□ 1.83
TTC7A-201ENST00000319190 MYOM3Q5VTT5 1437 aa26.51■■□□□ 1.83
TTC7A-201ENST00000319190 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.831e-6■■■■□ 20.8
TTC7A-201ENST00000319190 UACAQ9BZF9 1416 aa26.49■■□□□ 1.83
TTC7A-201ENST00000319190 KCNJ4P48050 445 aa26.45■■□□□ 1.83
TTC7A-201ENST00000319190 FGD6Q6ZV73 1430 aa26.45■■□□□ 1.82
TTC7A-201ENST00000319190 VGFO15240 615 aaPredicted RBP26.45■■□□□ 1.82
TTC7A-201ENST00000319190 TRIM44Q96DX7 344 aaPredicted RBP26.44■■□□□ 1.82
TTC7A-201ENST00000319190 CFTRP13569 1480 aa26.44■■□□□ 1.82
TTC7A-201ENST00000319190 GOLGA2Q08379 1002 aa26.43■■□□□ 1.82
TTC7A-201ENST00000319190 NGDNQ8NEJ9 315 aaKnown RBP26.43■■□□□ 1.82
TTC7A-201ENST00000319190 PHLDB1Q86UU1 1377 aa26.43■■□□□ 1.82
TTC7A-201ENST00000319190 KIF15Q9NS87 1388 aa26.43■■□□□ 1.82
TTC7A-201ENST00000319190 CSB-PGBD3P0DP91 1061 aa26.43■■□□□ 1.82
TTC7A-201ENST00000319190 NOP58Q9Y2X3 529 aaKnown RBP26.43■■□□□ 1.82
TTC7A-201ENST00000319190 HSP90AB1P08238 724 aaKnown RBP26.42■■□□□ 1.82
TTC7A-201ENST00000319190 ZRSR1Q15695 479 aaKnown RBP26.42■■□□□ 1.82
TTC7A-201ENST00000319190 FGD1P98174 961 aa26.41■■□□□ 1.82
TTC7A-201ENST00000319190 KIF21BO75037 1637 aa26.41■■□□□ 1.82
TTC7A-201ENST00000319190 PDE3BQ13370 1112 aa26.41■■□□□ 1.82
TTC7A-201ENST00000319190 CHMP4AQ9BY43 222 aa26.4■■□□□ 1.82
TTC7A-201ENST00000319190 PANK3Q9H999 370 aa26.38■■□□□ 1.81
TTC7A-201ENST00000319190 CFAP44Q96MT7 982 aa26.38■■□□□ 1.81
TTC7A-201ENST00000319190 ZNF644Q9H582 1327 aaPredicted RBP26.38■■□□□ 1.81
TTC7A-201ENST00000319190 GRIN2BQ13224 1484 aa26.37■■□□□ 1.81
TTC7A-201ENST00000319190 CUX1P39880 1505 aa26.37■■□□□ 1.81
TTC7A-201ENST00000319190 MYBBP1AQ9BQG0 1328 aaKnown RBP26.37■■□□□ 1.81
TTC7A-201ENST00000319190 USP47Q96K76 1375 aa26.37■■□□□ 1.81
TTC7A-201ENST00000319190 ITPRIPQ8IWB1 547 aa26.36■■□□□ 1.81
TTC7A-201ENST00000319190 RWDD1Q9H446 243 aaPredicted RBP26.36■■□□□ 1.81
TTC7A-201ENST00000319190 LRRC9Q6ZRR7 1453 aa26.35■■□□□ 1.81
TTC7A-201ENST00000319190 CCDC146Q8IYE0 955 aa26.35■■□□□ 1.81
TTC7A-201ENST00000319190 CASKIN1Q8WXD9 1431 aa26.35■■□□□ 1.81
TTC7A-201ENST00000319190 HSCBQ8IWL3 235 aa26.34■■□□□ 1.81
TTC7A-201ENST00000319190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.34■■□□□ 1.81
TTC7A-201ENST00000319190 STK31Q9BXU1 1019 aa26.33■■□□□ 1.81
TTC7A-201ENST00000319190 SMC4Q9NTJ3 1288 aa26.32■■□□□ 1.8
TTC7A-201ENST00000319190 NUTM2FA1L443 756 aa26.32■■□□□ 1.8
TTC7A-201ENST00000319190 CDK11BP21127 795 aaKnown RBP26.32■■□□□ 1.8
TTC7A-201ENST00000319190 PRKRIP1Q9H875 184 aaPredicted RBP26.31■■□□□ 1.8
TTC7A-201ENST00000319190 MCCP23508 829 aa26.31■■□□□ 1.8
TTC7A-201ENST00000319190 LMOD3Q0VAK6 560 aa26.31■■□□□ 1.8
TTC7A-201ENST00000319190 TPRNQ4KMQ1 711 aa26.31■■□□□ 1.8
TTC7A-201ENST00000319190 AMPHP49418 695 aa26.31■■□□□ 1.8
TTC7A-201ENST00000319190 EVC2Q86UK5 1308 aa26.3■■□□□ 1.8
TTC7A-201ENST00000319190 ERICH3Q5RHP9 1530 aa26.3■■□□□ 1.8
TTC7A-201ENST00000319190 APBB1O00213 710 aa26.3■■□□□ 1.8
TTC7A-201ENST00000319190 PTMAP06454 111 aaKnown RBP26.28■■□□□ 1.8
TTC7A-201ENST00000319190 CENPJQ9HC77 1338 aaPredicted RBP26.27■■□□□ 1.8
TTC7A-201ENST00000319190 FYCO1Q9BQS8 1478 aa26.26■■□□□ 1.79
TTC7A-201ENST00000319190 SYNJ1O43426 1573 aa26.26■■□□□ 1.79
TTC7A-201ENST00000319190 NCOA2Q15596 1464 aa26.25■■□□□ 1.79
TTC7A-201ENST00000319190 CGNL1Q0VF96 1302 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms