RNA–Protein interactions for RNA: ENST00000316843.8

LLGL1-201, Transcript of LLGL1, scribble cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LLGL1, Length 4,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LLGL1-201ENST00000316843 CCDC7Q96M83 1385 aa19.28■□□□□ 0.68
LLGL1-201ENST00000316843 MAP3K1Q13233 1512 aa19.28■□□□□ 0.68
LLGL1-201ENST00000316843 ABCA10Q8WWZ4 1543 aa19.27■□□□□ 0.67
LLGL1-201ENST00000316843 ST20-MTHFSA0A0A6YYL1 179 aa19.26■□□□□ 0.67
LLGL1-201ENST00000316843 EFCAB5A4FU69 1503 aa19.25■□□□□ 0.67
LLGL1-201ENST00000316843 CHGAP10645 457 aaKnown RBP19.24■□□□□ 0.67
LLGL1-201ENST00000316843 SENP3Q9H4L4 574 aaPredicted RBP19.24■□□□□ 0.67
LLGL1-201ENST00000316843 JPH4Q96JJ6 628 aa19.23■□□□□ 0.67
LLGL1-201ENST00000316843 DNMBPQ6XZF7 1577 aa19.23■□□□□ 0.67
LLGL1-201ENST00000316843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.22■□□□□ 0.67
LLGL1-201ENST00000316843 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
LLGL1-201ENST00000316843 ZBED9Q6R2W3 1325 aa19.2■□□□□ 0.66
LLGL1-201ENST00000316843 CNTLNQ9NXG0 1405 aa19.19■□□□□ 0.66
LLGL1-201ENST00000316843 USP47Q96K76 1375 aa19.19■□□□□ 0.66
LLGL1-201ENST00000316843 NUDCQ9Y266 331 aa19.19■□□□□ 0.66
LLGL1-201ENST00000316843 CDK13Q14004 1512 aaKnown RBP19.19■□□□□ 0.66
LLGL1-201ENST00000316843 ANKRD30AQ9BXX3 1397 aa19.18■□□□□ 0.66
LLGL1-201ENST00000316843 WDR43Q15061 677 aaKnown RBP eCLIP19.18■□□□□ 0.66
LLGL1-201ENST00000316843 BCL11AQ9H165 835 aa19.18■□□□□ 0.66
LLGL1-201ENST00000316843 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
LLGL1-201ENST00000316843 NOP58Q9Y2X3 529 aaKnown RBP19.17■□□□□ 0.66
LLGL1-201ENST00000316843 ERICH6BQ5W0A0 696 aa19.15■□□□□ 0.66
LLGL1-201ENST00000316843 ROCK2O75116 1388 aaKnown RBP19.14■□□□□ 0.65
LLGL1-201ENST00000316843 URB2Q14146 1524 aaKnown RBP19.14■□□□□ 0.65
LLGL1-201ENST00000316843 LAS1LQ9Y4W2 734 aaKnown RBP19.11■□□□□ 0.65
LLGL1-201ENST00000316843 EHBP1L1Q8N3D4 1523 aa19.1■□□□□ 0.65
LLGL1-201ENST00000316843 KNSTRNQ9Y448 316 aa19.1■□□□□ 0.65
LLGL1-201ENST00000316843 PRG4Q92954 1404 aaPredicted RBP19.1■□□□□ 0.65
LLGL1-201ENST00000316843 RCAN3Q9UKA8 241 aa19.09■□□□□ 0.65
LLGL1-201ENST00000316843 PRDM2Q13029 1718 aa19.09■□□□□ 0.65
LLGL1-201ENST00000316843 PTPN23Q9H3S7 1636 aa19.09■□□□□ 0.65
LLGL1-201ENST00000316843 EPRSP07814 1512 aaKnown RBP19.09■□□□□ 0.65
LLGL1-201ENST00000316843 MSH5O43196 834 aa19.08■□□□□ 0.65
LLGL1-201ENST00000316843 CARMIL2Q6F5E8 1435 aa19.08■□□□□ 0.64
LLGL1-201ENST00000316843 PLIN1O60240 522 aa19.07■□□□□ 0.64
LLGL1-201ENST00000316843 SUPT6HQ7KZ85 1726 aaKnown RBP19.07■□□□□ 0.64
LLGL1-201ENST00000316843 AKNAQ7Z591 1439 aa19.06■□□□□ 0.64
LLGL1-201ENST00000316843 EXOC6Q8TAG9 804 aa19.05■□□□□ 0.64
LLGL1-201ENST00000316843 DEKP35659 375 aaKnown RBP19.04■□□□□ 0.64
LLGL1-201ENST00000316843 NEUROD2Q15784 382 aa19.04■□□□□ 0.64
LLGL1-201ENST00000316843 ANKRD30BQ9BXX2 1392 aa19.04■□□□□ 0.64
LLGL1-201ENST00000316843 TNNT2P45379 298 aaPredicted RBP19.03■□□□□ 0.64
LLGL1-201ENST00000316843 TMF1P82094 1093 aa19.03■□□□□ 0.64
LLGL1-201ENST00000316843 RALBP1Q15311 655 aa19.03■□□□□ 0.64
LLGL1-201ENST00000316843 FANCIQ9NVI1 1328 aa19.03■□□□□ 0.64
LLGL1-201ENST00000316843 KTN1Q86UP2 1357 aaKnown RBP19.03■□□□□ 0.64
LLGL1-201ENST00000316843 DAPK1P53355 1430 aa19.03■□□□□ 0.64
LLGL1-201ENST00000316843 MIA2Q96PC5 1412 aa19.02■□□□□ 0.64
LLGL1-201ENST00000316843 SNAPC4Q5SXM2 1469 aa19.02■□□□□ 0.64
LLGL1-201ENST00000316843 RGS3P49796 1198 aa19.02■□□□□ 0.63
LLGL1-201ENST00000316843 NLRP13Q86W25 1043 aa19.01■□□□□ 0.63
LLGL1-201ENST00000316843 ANKRD50Q9ULJ7 1429 aa19.01■□□□□ 0.63
LLGL1-201ENST00000316843 CUL7Q14999 1698 aa19.01■□□□□ 0.63
LLGL1-201ENST00000316843 GRIN2BQ13224 1484 aa19■□□□□ 0.63
LLGL1-201ENST00000316843 PANK3Q9H999 370 aa19■□□□□ 0.63
LLGL1-201ENST00000316843 NBPF1Q3BBV0 1214 aa19■□□□□ 0.63
LLGL1-201ENST00000316843 MYBBP1AQ9BQG0 1328 aaKnown RBP18.99■□□□□ 0.63
LLGL1-201ENST00000316843 KIF15Q9NS87 1388 aa18.98■□□□□ 0.63
LLGL1-201ENST00000316843 ABCC5O15440 1437 aa18.98■□□□□ 0.63
LLGL1-201ENST00000316843 CDCA7LQ96GN5 454 aa18.97■□□□□ 0.63
LLGL1-201ENST00000316843 CFAP43Q8NDM7 1665 aa18.96■□□□□ 0.63
LLGL1-201ENST00000316843 PNISRQ8TF01 805 aaKnown RBP18.96■□□□□ 0.63
LLGL1-201ENST00000316843 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.96■□□□□ 0.63
LLGL1-201ENST00000316843 NEFMP07197 916 aa18.94■□□□□ 0.62
LLGL1-201ENST00000316843 NCOA1Q15788 1441 aa18.93■□□□□ 0.62
LLGL1-201ENST00000316843 RRP1P56182 461 aaKnown RBP18.93■□□□□ 0.62
LLGL1-201ENST00000316843 HECW1Q76N89 1606 aa18.93■□□□□ 0.62
LLGL1-201ENST00000316843 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
LLGL1-201ENST00000316843 PAK3O75914 559 aaPredicted RBP18.92■□□□□ 0.62
LLGL1-201ENST00000316843 IPO9Q96P70 1041 aaKnown RBP18.92■□□□□ 0.62
LLGL1-201ENST00000316843 CCDC146Q8IYE0 955 aa18.92■□□□□ 0.62
LLGL1-201ENST00000316843 IQGAP2Q13576 1575 aa18.92■□□□□ 0.62
LLGL1-201ENST00000316843 CCDC144AA2RUR9 1427 aa18.91■□□□□ 0.62
LLGL1-201ENST00000316843 ZNF608Q9ULD9 1512 aaPredicted RBP18.91■□□□□ 0.62
LLGL1-201ENST00000316843 KIAA1107Q9UPP5 1409 aa18.91■□□□□ 0.62
LLGL1-201ENST00000316843 RTN4Q9NQC3 1192 aaKnown RBP18.9■□□□□ 0.62
LLGL1-201ENST00000316843 PLB1Q6P1J6 1458 aa18.9■□□□□ 0.62
LLGL1-201ENST00000316843 UGGT2Q9NYU1 1516 aa18.9■□□□□ 0.62
LLGL1-201ENST00000316843 TROQ12816 1431 aaPredicted RBP18.89■□□□□ 0.61
LLGL1-201ENST00000316843 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.61
LLGL1-201ENST00000316843 FRAT1Q92837 279 aaPredicted RBP18.88■□□□□ 0.61
LLGL1-201ENST00000316843 PTPRGP23470 1445 aa18.88■□□□□ 0.61
LLGL1-201ENST00000316843 RPRD2Q5VT52 1461 aaKnown RBP18.88■□□□□ 0.61
LLGL1-201ENST00000316843 CDCA8Q53HL2 280 aa18.86■□□□□ 0.61
LLGL1-201ENST00000316843 ROCK1Q13464 1354 aa18.86■□□□□ 0.61
LLGL1-201ENST00000316843 CRBNQ96SW2 442 aa18.86■□□□□ 0.61
LLGL1-201ENST00000316843 ARXQ96QS3 562 aa18.85■□□□□ 0.61
LLGL1-201ENST00000316843 CTTNBP2Q8WZ74 1663 aa18.85■□□□□ 0.61
LLGL1-201ENST00000316843 PDE4AP27815 886 aa18.85■□□□□ 0.61
LLGL1-201ENST00000316843 TCERG1O14776 1098 aaKnown RBP18.84■□□□□ 0.61
LLGL1-201ENST00000316843 MAGI3Q5TCQ9 1506 aa18.84■□□□□ 0.61
LLGL1-201ENST00000316843 SKAP1Q86WV1 359 aa18.83■□□□□ 0.61
LLGL1-201ENST00000316843 EFCAB2Q5VUJ9 269 aa18.83■□□□□ 0.61
LLGL1-201ENST00000316843 MRC2Q9UBG0 1479 aa18.83■□□□□ 0.6
LLGL1-201ENST00000316843 SLC4A3P48751 1232 aa18.83■□□□□ 0.6
LLGL1-201ENST00000316843 KIAA0586Q9BVV6 1533 aa18.83■□□□□ 0.6
LLGL1-201ENST00000316843 C9orf84Q5VXU9 1444 aa18.82■□□□□ 0.6
LLGL1-201ENST00000316843 KIF3BO15066 747 aa18.81■□□□□ 0.6
LLGL1-201ENST00000316843 SAFB2Q14151 953 aaKnown RBP eCLIP18.81■□□□□ 0.6
LLGL1-201ENST00000316843 PDE3BQ13370 1112 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms