RNA–Protein interactions for RNA: ENST00000316843.8

LLGL1-201, Transcript of LLGL1, scribble cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LLGL1, Length 4,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LLGL1-201ENST00000316843 NISCHQ9Y2I1 1504 aa27.41■■□□□ 1.98
LLGL1-201ENST00000316843 DCAF8L2P0C7V8 631 aa25.12■■□□□ 1.61
LLGL1-201ENST00000316843 SHROOM4Q9ULL8 1493 aa25.1■■□□□ 1.61
LLGL1-201ENST00000316843 SUPT5HO00267 1087 aaKnown RBP24.98■■□□□ 1.59
LLGL1-201ENST00000316843 PCGF6Q9BYE7 350 aa23.67■■□□□ 1.38
LLGL1-201ENST00000316843 EHMT2Q96KQ7 1210 aa23.6■■□□□ 1.37
LLGL1-201ENST00000316843 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
LLGL1-201ENST00000316843 FAM9AQ8IZU1 332 aaPredicted RBP23.33■■□□□ 1.33
LLGL1-201ENST00000316843 LOC105371045A0A1W2PR82 267 aa23.26■■□□□ 1.31
LLGL1-201ENST00000316843 HRCP23327 699 aa23.13■■□□□ 1.29
LLGL1-201ENST00000316843 PPARGC1BQ86YN6 1023 aaKnown RBP23.03■■□□□ 1.28
LLGL1-201ENST00000316843 ZCCHC6Q5VYS8 1495 aaKnown RBP22.99■■□□□ 1.27
LLGL1-201ENST00000316843 TRIM41Q8WV44 630 aa22.99■■□□□ 1.27
LLGL1-201ENST00000316843 MYO15BQ96JP2 1530 aa22.81■■□□□ 1.24
LLGL1-201ENST00000316843 TTBK1Q5TCY1 1321 aaPredicted RBP22.8■■□□□ 1.24
LLGL1-201ENST00000316843 TRIM26Q12899 539 aaPredicted RBP22.7■■□□□ 1.22
LLGL1-201ENST00000316843 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
LLGL1-201ENST00000316843 ZEB1P37275 1124 aaPredicted RBP22.38■■□□□ 1.17
LLGL1-201ENST00000316843 CCER1Q8TC90 406 aaPredicted RBP22.36■■□□□ 1.17
LLGL1-201ENST00000316843 ABCC9O60706 1549 aa22.31■■□□□ 1.16
LLGL1-201ENST00000316843 RANGAP1P46060 587 aaPredicted RBP22.27■■□□□ 1.16
LLGL1-201ENST00000316843 UBTFP17480 764 aaKnown RBP22.21■■□□□ 1.15
LLGL1-201ENST00000316843 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
LLGL1-201ENST00000316843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.16■■□□□ 1.14
LLGL1-201ENST00000316843 DCAF1Q9Y4B6 1507 aa22.14■■□□□ 1.13
LLGL1-201ENST00000316843 RSF1Q96T23 1441 aaPredicted RBP22.02■■□□□ 1.12
LLGL1-201ENST00000316843 APLP2Q06481 763 aa22■■□□□ 1.11
LLGL1-201ENST00000316843 PABPN1Q86U42 306 aaKnown RBP eCLIP21.9■■□□□ 1.1
LLGL1-201ENST00000316843 YTHDC1Q96MU7 727 aaKnown RBP21.83■■□□□ 1.09
LLGL1-201ENST00000316843 HNRNPUL2Q1KMD3 747 aaKnown RBP21.81■■□□□ 1.08
LLGL1-201ENST00000316843 CENPBP07199 599 aaPredicted RBP21.75■■□□□ 1.07
LLGL1-201ENST00000316843 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
LLGL1-201ENST00000316843 DIEXFQ68CQ4 756 aaKnown RBP21.67■■□□□ 1.06
LLGL1-201ENST00000316843 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
LLGL1-201ENST00000316843 CSRNP3Q8WYN3 585 aa21.56■■□□□ 1.04
LLGL1-201ENST00000316843 ITGAEP38570 1179 aa21.49■■□□□ 1.03
LLGL1-201ENST00000316843 ATP1B4Q9UN42 357 aaPredicted RBP21.48■■□□□ 1.03
LLGL1-201ENST00000316843 MROH2BQ7Z745 1585 aa21.47■■□□□ 1.03
LLGL1-201ENST00000316843 PELP1Q8IZL8 1130 aaKnown RBP21.45■■□□□ 1.02
LLGL1-201ENST00000316843 SCAF1Q9H7N4 1312 aaKnown RBP21.45■■□□□ 1.02
LLGL1-201ENST00000316843 GTF3C3Q9Y5Q9 886 aa21.42■■□□□ 1.02
LLGL1-201ENST00000316843 ACIN1Q9UKV3 1341 aaKnown RBP21.34■■□□□ 1.01
LLGL1-201ENST00000316843 NEUROD1Q13562 356 aa21.33■■□□□ 1.01
LLGL1-201ENST00000316843 NACADO15069 1562 aa21.31■■□□□ 1
LLGL1-201ENST00000316843 ZNF316A6NFI3 1004 aaPredicted RBP21.28■■□□□ 1
LLGL1-201ENST00000316843 WIZO95785 1651 aa21.26■□□□□ 0.99
LLGL1-201ENST00000316843 CEP162Q5TB80 1403 aa21.24■□□□□ 0.99
LLGL1-201ENST00000316843 SOGA1O94964 1423 aa21.22■□□□□ 0.99
LLGL1-201ENST00000316843 ABCC8Q09428 1581 aa21.2■□□□□ 0.98
LLGL1-201ENST00000316843 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
LLGL1-201ENST00000316843 BAZ1AQ9NRL2 1556 aaPredicted RBP21.11■□□□□ 0.97
LLGL1-201ENST00000316843 TNIKQ9UKE5 1360 aa21.04■□□□□ 0.96
LLGL1-201ENST00000316843 MIER1Q8N108 512 aa21.02■□□□□ 0.96
LLGL1-201ENST00000316843 WRNQ14191 1432 aaPredicted RBP eCLIP21■□□□□ 0.95
LLGL1-201ENST00000316843 CLIP1P30622 1438 aa20.99■□□□□ 0.95
LLGL1-201ENST00000316843 RUSC2Q8N2Y8 1516 aa20.97■□□□□ 0.95
LLGL1-201ENST00000316843 FAM50AQ14320 339 aaKnown RBP20.95■□□□□ 0.95
LLGL1-201ENST00000316843 P3H3Q8IVL6 736 aa20.95■□□□□ 0.94
LLGL1-201ENST00000316843 GOLGA3Q08378 1498 aa20.94■□□□□ 0.94
LLGL1-201ENST00000316843 EEA1Q15075 1411 aa20.88■□□□□ 0.93
LLGL1-201ENST00000316843 TOP2AP11388 1531 aaKnown RBP20.8■□□□□ 0.92
LLGL1-201ENST00000316843 CEP164Q9UPV0 1460 aa20.76■□□□□ 0.91
LLGL1-201ENST00000316843 BCANQ96GW7 911 aa20.75■□□□□ 0.91
LLGL1-201ENST00000316843 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
LLGL1-201ENST00000316843 SMARCA4P51532 1647 aa20.71■□□□□ 0.91
LLGL1-201ENST00000316843 NEFLP07196 543 aa20.68■□□□□ 0.9
LLGL1-201ENST00000316843 KANK4Q5T7N3 995 aaPredicted RBP20.67■□□□□ 0.9
LLGL1-201ENST00000316843 SMARCA2P51531 1590 aa20.65■□□□□ 0.9
LLGL1-201ENST00000316843 CNGB1Q14028 1251 aaPredicted RBP20.64■□□□□ 0.9
LLGL1-201ENST00000316843 HIRIP3Q9BW71 556 aaPredicted RBP20.64■□□□□ 0.89
LLGL1-201ENST00000316843 DDX10Q13206 875 aaKnown RBP20.6■□□□□ 0.89
LLGL1-201ENST00000316843 VPS8Q8N3P4 1428 aa20.6■□□□□ 0.89
LLGL1-201ENST00000316843 RAPGEF2Q9Y4G8 1499 aa20.58■□□□□ 0.89
LLGL1-201ENST00000316843 ARID3CA6NKF2 412 aa20.56■□□□□ 0.88
LLGL1-201ENST00000316843 POLR3GLQ9BT43 218 aa20.49■□□□□ 0.87
LLGL1-201ENST00000316843 TRIM52Q96A61 297 aa20.48■□□□□ 0.87
LLGL1-201ENST00000316843 SIN3AQ96ST3 1273 aa20.47■□□□□ 0.87
LLGL1-201ENST00000316843 ATAD2BQ9ULI0 1458 aa20.46■□□□□ 0.87
LLGL1-201ENST00000316843 KIF27Q86VH2 1401 aa20.45■□□□□ 0.86
LLGL1-201ENST00000316843 MYT1Q01538 1121 aa20.43■□□□□ 0.86
LLGL1-201ENST00000316843 ANP32CO43423 234 aa20.42■□□□□ 0.86
LLGL1-201ENST00000316843 FKBP8Q14318 412 aa20.38■□□□□ 0.85
LLGL1-201ENST00000316843 CCNB3Q8WWL7 1395 aa20.36■□□□□ 0.85
LLGL1-201ENST00000316843 CHIC2Q9UKJ5 165 aa20.34■□□□□ 0.85
LLGL1-201ENST00000316843 SYNJ1O43426 1573 aa20.32■□□□□ 0.84
LLGL1-201ENST00000316843 ERICH6Q7L0X2 663 aa20.3■□□□□ 0.84
LLGL1-201ENST00000316843 DHX57Q6P158 1386 aaKnown RBP20.29■□□□□ 0.84
LLGL1-201ENST00000316843 CUX2O14529 1486 aa20.29■□□□□ 0.84
LLGL1-201ENST00000316843 CLSPNQ9HAW4 1339 aa20.28■□□□□ 0.84
LLGL1-201ENST00000316843 KCNH8Q96L42 1107 aa20.28■□□□□ 0.84
LLGL1-201ENST00000316843 TONSLQ96HA7 1378 aa20.27■□□□□ 0.84
LLGL1-201ENST00000316843 SUPT16HQ9Y5B9 1047 aaKnown RBP20.25■□□□□ 0.83
LLGL1-201ENST00000316843 CARMIL1Q5VZK9 1371 aa20.24■□□□□ 0.83
LLGL1-201ENST00000316843 ZNF326Q5BKZ1 582 aaKnown RBP20.23■□□□□ 0.83
LLGL1-201ENST00000316843 RAB3GAP2Q9H2M9 1393 aa20.21■□□□□ 0.83
LLGL1-201ENST00000316843 KIF21BO75037 1637 aa20.21■□□□□ 0.83
LLGL1-201ENST00000316843 RRP7BPQ9NSQ0 103 aa20.2■□□□□ 0.82
LLGL1-201ENST00000316843 MTUS2Q5JR59 1369 aa20.2■□□□□ 0.82
LLGL1-201ENST00000316843 HNRNPUQ00839 825 aaKnown RBP eCLIP20.17■□□□□ 0.82
LLGL1-201ENST00000316843 EIF4G1Q04637 1599 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms