RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 TMC1Q8TDI8 760 aa19.74■□□□□ 0.75
COL6A2-202ENST00000310645 KDM6BO15054 1643 aa19.72■□□□□ 0.75
COL6A2-202ENST00000310645 NEFMP07197 916 aa19.7■□□□□ 0.74
COL6A2-202ENST00000310645 FANCD2Q9BXW9 1451 aa19.69■□□□□ 0.74
COL6A2-202ENST00000310645 SUPT6HQ7KZ85 1726 aaKnown RBP19.68■□□□□ 0.74
COL6A2-202ENST00000310645 TDRD9Q8NDG6 1382 aaKnown RBP19.68■□□□□ 0.74
COL6A2-202ENST00000310645 EXOC6Q8TAG9 804 aa19.67■□□□□ 0.74
COL6A2-202ENST00000310645 POLA1P09884 1462 aaPredicted RBP19.66■□□□□ 0.74
COL6A2-202ENST00000310645 RNF123Q5XPI4 1314 aa19.66■□□□□ 0.74
COL6A2-202ENST00000310645 PRDM2Q13029 1718 aa19.65■□□□□ 0.74
COL6A2-202ENST00000310645 ANKRD30BQ9BXX2 1392 aa19.64■□□□□ 0.74
COL6A2-202ENST00000310645 PNISRQ8TF01 805 aaKnown RBP19.64■□□□□ 0.73
COL6A2-202ENST00000310645 ABCA10Q8WWZ4 1543 aa19.64■□□□□ 0.73
COL6A2-202ENST00000310645 GRIN2BQ13224 1484 aa19.64■□□□□ 0.73
COL6A2-202ENST00000310645 EHBP1L1Q8N3D4 1523 aa19.63■□□□□ 0.73
COL6A2-202ENST00000310645 LRRIQ1Q96JM4 1722 aa19.63■□□□□ 0.73
COL6A2-202ENST00000310645 CTTNBP2Q8WZ74 1663 aa19.63■□□□□ 0.73
COL6A2-202ENST00000310645 PDE4AP27815 886 aa19.62■□□□□ 0.73
COL6A2-202ENST00000310645 HECW1Q76N89 1606 aa19.62■□□□□ 0.73
COL6A2-202ENST00000310645 DHX29Q7Z478 1369 aaKnown RBP19.62■□□□□ 0.73
COL6A2-202ENST00000310645 SPATA31E1Q6ZUB1 1445 aa19.61■□□□□ 0.73
COL6A2-202ENST00000310645 MAGI3Q5TCQ9 1506 aa19.61■□□□□ 0.73
COL6A2-202ENST00000310645 UGGT2Q9NYU1 1516 aa19.61■□□□□ 0.73
COL6A2-202ENST00000310645 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.61■□□□□ 0.73
COL6A2-202ENST00000310645 ZNF644Q9H582 1327 aaPredicted RBP19.6■□□□□ 0.73
COL6A2-202ENST00000310645 RPRD2Q5VT52 1461 aaKnown RBP19.6■□□□□ 0.73
COL6A2-202ENST00000310645 USP47Q96K76 1375 aa19.59■□□□□ 0.73
COL6A2-202ENST00000310645 RRP1P56182 461 aaKnown RBP19.58■□□□□ 0.73
COL6A2-202ENST00000310645 SKAP1Q86WV1 359 aa19.58■□□□□ 0.73
COL6A2-202ENST00000310645 TOPBP1Q92547 1522 aa19.58■□□□□ 0.72
COL6A2-202ENST00000310645 TCERG1O14776 1098 aaKnown RBP19.57■□□□□ 0.72
COL6A2-202ENST00000310645 RCAN3Q9UKA8 241 aa19.56■□□□□ 0.72
COL6A2-202ENST00000310645 TEX14Q8IWB6 1497 aa19.56■□□□□ 0.72
COL6A2-202ENST00000310645 CUL7Q14999 1698 aa19.55■□□□□ 0.72
COL6A2-202ENST00000310645 GCC2Q8IWJ2 1684 aa19.55■□□□□ 0.72
COL6A2-202ENST00000310645 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
COL6A2-202ENST00000310645 KDM2AQ9Y2K7 1162 aa19.54■□□□□ 0.72
COL6A2-202ENST00000310645 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
COL6A2-202ENST00000310645 TCOF1Q13428 1488 aaKnown RBP19.53■□□□□ 0.72
COL6A2-202ENST00000310645 PLIN1O60240 522 aa19.53■□□□□ 0.72
COL6A2-202ENST00000310645 BACH2Q9BYV9 841 aa19.53■□□□□ 0.72
COL6A2-202ENST00000310645 NESP48681 1621 aa19.51■□□□□ 0.71
COL6A2-202ENST00000310645 CARD11Q9BXL7 1154 aa19.51■□□□□ 0.71
COL6A2-202ENST00000310645 CDK13Q14004 1512 aaKnown RBP19.51■□□□□ 0.71
COL6A2-202ENST00000310645 SLC4A3P48751 1232 aa19.5■□□□□ 0.71
COL6A2-202ENST00000310645 ZNF777Q9ULD5 760 aaPredicted RBP19.5■□□□□ 0.71
COL6A2-202ENST00000310645 SAMD9Q5K651 1589 aa19.49■□□□□ 0.71
COL6A2-202ENST00000310645 ARHGEF11O15085 1522 aa19.49■□□□□ 0.71
COL6A2-202ENST00000310645 PPM1GO15355 546 aaPredicted RBP19.48■□□□□ 0.71
COL6A2-202ENST00000310645 PKD2Q13563 968 aa19.48■□□□□ 0.71
COL6A2-202ENST00000310645 CDCA7LQ96GN5 454 aa19.48■□□□□ 0.71
COL6A2-202ENST00000310645 MIA2Q96PC5 1412 aa19.47■□□□□ 0.71
COL6A2-202ENST00000310645 USP35Q9P2H5 1018 aa19.47■□□□□ 0.71
COL6A2-202ENST00000310645 BRPF3Q9ULD4 1205 aa19.47■□□□□ 0.71
COL6A2-202ENST00000310645 DAPK1P53355 1430 aa19.46■□□□□ 0.71
COL6A2-202ENST00000310645 ST20-MTHFSA0A0A6YYL1 179 aa19.46■□□□□ 0.71
COL6A2-202ENST00000310645 EPRSP07814 1512 aaKnown RBP19.45■□□□□ 0.7
COL6A2-202ENST00000310645 GAPVD1Q14C86 1478 aa19.45■□□□□ 0.7
COL6A2-202ENST00000310645 BCORL1Q5H9F3 1711 aa19.44■□□□□ 0.7
COL6A2-202ENST00000310645 THOC2Q8NI27 1593 aaKnown RBP19.44■□□□□ 0.7
COL6A2-202ENST00000310645 MYBBP1AQ9BQG0 1328 aaKnown RBP19.44■□□□□ 0.7
COL6A2-202ENST00000310645 DAXXQ9UER7 740 aaPredicted RBP19.43■□□□□ 0.7
COL6A2-202ENST00000310645 ABCC5O15440 1437 aa19.43■□□□□ 0.7
COL6A2-202ENST00000310645 KIF15Q9NS87 1388 aa19.43■□□□□ 0.7
COL6A2-202ENST00000310645 ABCA5Q8WWZ7 1642 aa19.43■□□□□ 0.7
COL6A2-202ENST00000310645 MS4A1P11836 297 aa19.41■□□□□ 0.7
COL6A2-202ENST00000310645 CRBNQ96SW2 442 aa19.4■□□□□ 0.7
COL6A2-202ENST00000310645 RALBP1Q15311 655 aa19.39■□□□□ 0.69
COL6A2-202ENST00000310645 ROCK1Q13464 1354 aa19.39■□□□□ 0.69
COL6A2-202ENST00000310645 EIF5BO60841 1220 aaKnown RBP19.38■□□□□ 0.69
COL6A2-202ENST00000310645 BRD4O60885 1362 aaPredicted RBP19.38■□□□□ 0.69
COL6A2-202ENST00000310645 LRPPRCP42704 1394 aaKnown RBP19.38■□□□□ 0.69
COL6A2-202ENST00000310645 GSE1Q14687 1217 aa19.38■□□□□ 0.69
COL6A2-202ENST00000310645 POLR1AO95602 1720 aaPredicted RBP19.38■□□□□ 0.69
COL6A2-202ENST00000310645 DDRGK1Q96HY6 314 aa19.37■□□□□ 0.69
COL6A2-202ENST00000310645 ROCK2O75116 1388 aaKnown RBP19.37■□□□□ 0.69
COL6A2-202ENST00000310645 NFKBIBQ15653 356 aa19.37■□□□□ 0.69
COL6A2-202ENST00000310645 ARID4BQ4LE39 1312 aaPredicted RBP19.37■□□□□ 0.69
COL6A2-202ENST00000310645 DCAF11Q8TEB1 546 aa19.37■□□□□ 0.69
COL6A2-202ENST00000310645 CFDP1Q9UEE9 299 aaPredicted RBP19.37■□□□□ 0.69
COL6A2-202ENST00000310645 WASHC2CQ9Y4E1 1318 aa19.36■□□□□ 0.69
COL6A2-202ENST00000310645 CC2D1BQ5T0F9 858 aaKnown RBP19.36■□□□□ 0.69
COL6A2-202ENST00000310645 NLRP13Q86W25 1043 aa19.34■□□□□ 0.69
COL6A2-202ENST00000310645 PZPP20742 1482 aa19.34■□□□□ 0.69
COL6A2-202ENST00000310645 URB2Q14146 1524 aaKnown RBP19.34■□□□□ 0.69
COL6A2-202ENST00000310645 FRAT1Q92837 279 aaPredicted RBP19.33■□□□□ 0.69
COL6A2-202ENST00000310645 KIAA1107Q9UPP5 1409 aa19.33■□□□□ 0.68
COL6A2-202ENST00000310645 PDE3BQ13370 1112 aa19.32■□□□□ 0.68
COL6A2-202ENST00000310645 C20orf194Q5TEA3 1177 aa19.32■□□□□ 0.68
COL6A2-202ENST00000310645 KTN1Q86UP2 1357 aaKnown RBP19.29■□□□□ 0.68
COL6A2-202ENST00000310645 LAMC3Q9Y6N6 1575 aa19.29■□□□□ 0.68
COL6A2-202ENST00000310645 KDM5CP41229 1560 aa19.28■□□□□ 0.68
COL6A2-202ENST00000310645 MBD5Q9P267 1494 aa19.28■□□□□ 0.68
COL6A2-202ENST00000310645 NUP155O75694 1391 aa19.28■□□□□ 0.68
COL6A2-202ENST00000310645 RGS3P49796 1198 aa19.27■□□□□ 0.68
COL6A2-202ENST00000310645 RGL3Q3MIN7 710 aa19.26■□□□□ 0.67
COL6A2-202ENST00000310645 DNMT1P26358 1616 aaKnown RBP19.26■□□□□ 0.67
COL6A2-202ENST00000310645 FRAT2O75474 233 aaPredicted RBP19.24■□□□□ 0.67
COL6A2-202ENST00000310645 WDR62O43379 1518 aa19.22■□□□□ 0.67
COL6A2-202ENST00000310645 KIF14Q15058 1648 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms