RNA–Protein interactions for RNA: ENST00000301765.9

VPS37C-201, Transcript of VPS37C, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37C, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-201ENST00000301765 UGGT2Q9NYU1 1516 aa23.13■■□□□ 1.29
VPS37C-201ENST00000301765 PTPN23Q9H3S7 1636 aa23.13■■□□□ 1.29
VPS37C-201ENST00000301765 UACAQ9BZF9 1416 aa23.12■■□□□ 1.29
VPS37C-201ENST00000301765 SUPT6HQ7KZ85 1726 aaKnown RBP23.12■■□□□ 1.29
VPS37C-201ENST00000301765 KDM6BO15054 1643 aa23.12■■□□□ 1.29
VPS37C-201ENST00000301765 CNGB1Q14028 1251 aaPredicted RBP23.11■■□□□ 1.29
VPS37C-201ENST00000301765 NOP58Q9Y2X3 529 aaKnown RBP23.11■■□□□ 1.29
VPS37C-201ENST00000301765 IFT140Q96RY7 1462 aa23.1■■□□□ 1.29
VPS37C-201ENST00000301765 EHBP1L1Q8N3D4 1523 aa23.1■■□□□ 1.29
VPS37C-201ENST00000301765 DISP1Q96F81 1524 aa23.09■■□□□ 1.29
VPS37C-201ENST00000301765 IL27Q8NEV9 243 aa23.09■■□□□ 1.29
VPS37C-201ENST00000301765 C11orf95C9JLR9 678 aaPredicted RBP23.08■■□□□ 1.29
VPS37C-201ENST00000301765 FAM9BQ8IZU0 186 aa23.08■■□□□ 1.29
VPS37C-201ENST00000301765 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.08■■□□□ 1.29
VPS37C-201ENST00000301765 MPHOSPH9Q99550 1183 aa23.07■■□□□ 1.28
VPS37C-201ENST00000301765 MYT1LQ9UL68 1186 aa23.07■■□□□ 1.28
VPS37C-201ENST00000301765 KDM5BQ9UGL1 1544 aa23.06■■□□□ 1.28
VPS37C-201ENST00000301765 PRG4Q92954 1404 aaPredicted RBP23.06■■□□□ 1.28
VPS37C-201ENST00000301765 SENP3-EIF4A1A0A087X0R7 540 aa23.06■■□□□ 1.28
VPS37C-201ENST00000301765 DENND4BO75064 1496 aaPredicted RBP23.04■■□□□ 1.28
VPS37C-201ENST00000301765 PLB1Q6P1J6 1458 aa23.04■■□□□ 1.28
VPS37C-201ENST00000301765 JPH4Q96JJ6 628 aa23.04■■□□□ 1.28
VPS37C-201ENST00000301765 GRIN2AQ12879 1464 aa23.04■■□□□ 1.28
VPS37C-201ENST00000301765 PPP4R2Q9NY27 417 aa23.03■■□□□ 1.28
VPS37C-201ENST00000301765 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
VPS37C-201ENST00000301765 WDR62O43379 1518 aa23.03■■□□□ 1.28
VPS37C-201ENST00000301765 KIAA0586Q9BVV6 1533 aa23.02■■□□□ 1.28
VPS37C-201ENST00000301765 NUP153P49790 1475 aaKnown RBP23.02■■□□□ 1.28
VPS37C-201ENST00000301765 HECW1Q76N89 1606 aa23.02■■□□□ 1.28
VPS37C-201ENST00000301765 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.28
VPS37C-201ENST00000301765 L3MBTL2Q969R5 705 aa22.99■■□□□ 1.27
VPS37C-201ENST00000301765 EIF4G2P78344 907 aaKnown RBP eCLIP22.97■■□□□ 1.27
VPS37C-201ENST00000301765 CFDP1Q9UEE9 299 aaPredicted RBP22.97■■□□□ 1.27
VPS37C-201ENST00000301765 RTL5Q5HYW3 569 aaPredicted RBP22.96■■□□□ 1.27
VPS37C-201ENST00000301765 KIAA0556O60303 1618 aa22.94■■□□□ 1.26
VPS37C-201ENST00000301765 MRS2Q9HD23 443 aa22.94■■□□□ 1.26
VPS37C-201ENST00000301765 SLC4A1APQ9BWU0 796 aaKnown RBP22.93■■□□□ 1.26
VPS37C-201ENST00000301765 ABCC5O15440 1437 aa22.92■■□□□ 1.26
VPS37C-201ENST00000301765 TCOF1Q13428 1488 aaKnown RBP22.92■■□□□ 1.26
VPS37C-201ENST00000301765 CEP170Q5SW79 1584 aa22.91■■□□□ 1.26
VPS37C-201ENST00000301765 NBPF8Q3BBV2 869 aa22.91■■□□□ 1.26
VPS37C-201ENST00000301765 PRKRIP1Q9H875 184 aaPredicted RBP22.9■■□□□ 1.26
VPS37C-201ENST00000301765 DAPK1P53355 1430 aa22.89■■□□□ 1.26
VPS37C-201ENST00000301765 ZNF326Q5BKZ1 582 aaKnown RBP22.87■■□□□ 1.25
VPS37C-201ENST00000301765 POLR3GLQ9BT43 218 aa22.87■■□□□ 1.25
VPS37C-201ENST00000301765 MIA2Q96PC5 1412 aa22.86■■□□□ 1.25
VPS37C-201ENST00000301765 CNTLNQ9NXG0 1405 aa22.86■■□□□ 1.25
VPS37C-201ENST00000301765 NPM2Q86SE8 214 aaKnown RBP22.84■■□□□ 1.25
VPS37C-201ENST00000301765 RAPGEF6Q8TEU7 1601 aa22.83■■□□□ 1.25
VPS37C-201ENST00000301765 SYNJ2O15056 1496 aa22.83■■□□□ 1.25
VPS37C-201ENST00000301765 CCDC7Q96M83 1385 aa22.83■■□□□ 1.24
VPS37C-201ENST00000301765 ANP32AP39687 249 aaKnown RBP22.82■■□□□ 1.24
VPS37C-201ENST00000301765 ZBTB47Q9UFB7 747 aaPredicted RBP22.82■■□□□ 1.24
VPS37C-201ENST00000301765 HNRNPMP52272 730 aaKnown RBP eCLIP22.8■■□□□ 1.244e-7■■■■□ 24.4
VPS37C-201ENST00000301765 KIF14Q15058 1648 aa22.79■■□□□ 1.24
VPS37C-201ENST00000301765 PLEKHD1A6NEE1 506 aa22.79■■□□□ 1.24
VPS37C-201ENST00000301765 LAS1LQ9Y4W2 734 aaKnown RBP22.79■■□□□ 1.24
VPS37C-201ENST00000301765 KIF7Q2M1P5 1343 aa22.78■■□□□ 1.24
VPS37C-201ENST00000301765 TROQ12816 1431 aaPredicted RBP22.78■■□□□ 1.24
VPS37C-201ENST00000301765 MAGI1Q96QZ7 1491 aaPredicted RBP22.77■■□□□ 1.24
VPS37C-201ENST00000301765 IPO9Q96P70 1041 aaKnown RBP22.77■■□□□ 1.24
VPS37C-201ENST00000301765 GPATCH8Q9UKJ3 1502 aaKnown RBP22.77■■□□□ 1.23
VPS37C-201ENST00000301765 ANKRD30BQ9BXX2 1392 aa22.77■■□□□ 1.23
VPS37C-201ENST00000301765 NCOA1Q15788 1441 aa22.75■■□□□ 1.23
VPS37C-201ENST00000301765 PKD2Q13563 968 aa22.75■■□□□ 1.23
VPS37C-201ENST00000301765 ERICH6BQ5W0A0 696 aa22.74■■□□□ 1.23
VPS37C-201ENST00000301765 CAMSAP2Q08AD1 1489 aa22.73■■□□□ 1.23
VPS37C-201ENST00000301765 ZBED9Q6R2W3 1325 aa22.73■■□□□ 1.23
VPS37C-201ENST00000301765 GCC2Q8IWJ2 1684 aa22.72■■□□□ 1.23
VPS37C-201ENST00000301765 CARMIL2Q6F5E8 1435 aa22.72■■□□□ 1.23
VPS37C-201ENST00000301765 AKNAQ7Z591 1439 aa22.72■■□□□ 1.23
VPS37C-201ENST00000301765 NUP160Q12769 1436 aa22.7■■□□□ 1.22
VPS37C-201ENST00000301765 ATP10BO94823 1461 aa22.69■■□□□ 1.22
VPS37C-201ENST00000301765 EIF5BO60841 1220 aaKnown RBP22.69■■□□□ 1.22
VPS37C-201ENST00000301765 KDM2AQ9Y2K7 1162 aa22.68■■□□□ 1.22
VPS37C-201ENST00000301765 ROCK1Q13464 1354 aa22.67■■□□□ 1.22
VPS37C-201ENST00000301765 DNMT1P26358 1616 aaKnown RBP22.67■■□□□ 1.22
VPS37C-201ENST00000301765 NEFMP07197 916 aa22.66■■□□□ 1.22
VPS37C-201ENST00000301765 PZPP20742 1482 aa22.63■■□□□ 1.21
VPS37C-201ENST00000301765 PTPRGP23470 1445 aa22.63■■□□□ 1.21
VPS37C-201ENST00000301765 NUP155O75694 1391 aa22.61■■□□□ 1.21
VPS37C-201ENST00000301765 RPRD2Q5VT52 1461 aaKnown RBP22.6■■□□□ 1.21
VPS37C-201ENST00000301765 BRPF3Q9ULD4 1205 aa22.6■■□□□ 1.21
VPS37C-201ENST00000301765 TSPY4P0CV99 314 aa22.6■■□□□ 1.21
VPS37C-201ENST00000301765 TSPY10P0CW01 314 aa22.6■■□□□ 1.21
VPS37C-201ENST00000301765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.6■■□□□ 1.21
VPS37C-201ENST00000301765 TEX14Q8IWB6 1497 aa22.59■■□□□ 1.21
VPS37C-201ENST00000301765 SPATA31E1Q6ZUB1 1445 aa22.59■■□□□ 1.21
VPS37C-201ENST00000301765 ANKRD50Q9ULJ7 1429 aa22.57■■□□□ 1.2
VPS37C-201ENST00000301765 ANKRD30AQ9BXX3 1397 aa22.56■■□□□ 1.2
VPS37C-201ENST00000301765 DHX29Q7Z478 1369 aaKnown RBP22.54■■□□□ 1.2
VPS37C-201ENST00000301765 RGL3Q3MIN7 710 aa22.53■■□□□ 1.2
VPS37C-201ENST00000301765 NUDCQ9Y266 331 aa22.52■■□□□ 1.2
VPS37C-201ENST00000301765 ERCC6L2Q5T890 1561 aa22.52■■□□□ 1.2
VPS37C-201ENST00000301765 C9orf84Q5VXU9 1444 aa22.51■■□□□ 1.19
VPS37C-201ENST00000301765 ABCA8O94911 1581 aa22.51■■□□□ 1.19
VPS37C-201ENST00000301765 ABCC10Q5T3U5 1492 aa22.51■■□□□ 1.19
VPS37C-201ENST00000301765 DCAF11Q8TEB1 546 aa22.5■■□□□ 1.19
VPS37C-201ENST00000301765 USP47Q96K76 1375 aa22.49■■□□□ 1.19
VPS37C-201ENST00000301765 KIAA1107Q9UPP5 1409 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms