RNA–Protein interactions for RNA: ENST00000301071.11

TUBA1A-202, Transcript of tubulin alpha 1a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1A, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-202ENST00000301071 MAPKBP1O60336 1514 aa13.09□□□□□ -0.31
TUBA1A-202ENST00000301071 NCOA2Q15596 1464 aa13.08□□□□□ -0.32
TUBA1A-202ENST00000301071 KCNH8Q96L42 1107 aa13.05□□□□□ -0.32
TUBA1A-202ENST00000301071 PHLDB1Q86UU1 1377 aa13.04□□□□□ -0.32
TUBA1A-202ENST00000301071 ABCC10Q5T3U5 1492 aa13.04□□□□□ -0.32
TUBA1A-202ENST00000301071 CDC42BPAQ5VT25 1732 aa13.04□□□□□ -0.32
TUBA1A-202ENST00000301071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.04□□□□□ -0.32
TUBA1A-202ENST00000301071 TTC37Q6PGP7 1564 aa13.04□□□□□ -0.32
TUBA1A-202ENST00000301071 ABCA9Q8IUA7 1624 aa13.01□□□□□ -0.33
TUBA1A-202ENST00000301071 ITSN2Q9NZM3 1697 aa13.01□□□□□ -0.33
TUBA1A-202ENST00000301071 MYT1LQ9UL68 1186 aa13.01□□□□□ -0.33
TUBA1A-202ENST00000301071 MYO5CQ9NQX4 1742 aa13.01□□□□□ -0.33
TUBA1A-202ENST00000301071 CDC42BPBQ9Y5S2 1711 aa13□□□□□ -0.33
TUBA1A-202ENST00000301071 MYOM3Q5VTT5 1437 aa13□□□□□ -0.33
TUBA1A-202ENST00000301071 GPATCH8Q9UKJ3 1502 aaKnown RBP13□□□□□ -0.33
TUBA1A-202ENST00000301071 CCNB3Q8WWL7 1395 aa13□□□□□ -0.33
TUBA1A-202ENST00000301071 PREX2Q70Z35 1606 aa12.99□□□□□ -0.33
TUBA1A-202ENST00000301071 DIP2BQ9P265 1576 aa12.99□□□□□ -0.33
TUBA1A-202ENST00000301071 KIF13AQ9H1H9 1805 aa12.99□□□□□ -0.33
TUBA1A-202ENST00000301071 RRBP1Q9P2E9 1410 aaKnown RBP12.97□□□□□ -0.33
TUBA1A-202ENST00000301071 GLI2P10070 1586 aa12.97□□□□□ -0.33
TUBA1A-202ENST00000301071 FGD6Q6ZV73 1430 aa12.97□□□□□ -0.33
TUBA1A-202ENST00000301071 PTPN23Q9H3S7 1636 aa12.96□□□□□ -0.34
TUBA1A-202ENST00000301071 MAP3K4Q9Y6R4 1608 aa12.96□□□□□ -0.34
TUBA1A-202ENST00000301071 MIA2Q96PC5 1412 aa12.95□□□□□ -0.34
TUBA1A-202ENST00000301071 PLCH2O75038 1416 aa12.94□□□□□ -0.34
TUBA1A-202ENST00000301071 NEFLP07196 543 aa12.94□□□□□ -0.34
TUBA1A-202ENST00000301071 CFDP1Q9UEE9 299 aaPredicted RBP12.94□□□□□ -0.34
TUBA1A-202ENST00000301071 TSPOAP1O95153 1857 aa12.94□□□□□ -0.34
TUBA1A-202ENST00000301071 DHX57Q6P158 1386 aaKnown RBP12.93□□□□□ -0.34
TUBA1A-202ENST00000301071 ARHGAP5Q13017 1502 aa12.93□□□□□ -0.34
TUBA1A-202ENST00000301071 FAM69CQ0P6D2 419 aa12.93□□□□□ -0.34
TUBA1A-202ENST00000301071 ARAP3Q8WWN8 1544 aa12.92□□□□□ -0.34
TUBA1A-202ENST00000301071 TCOF1Q13428 1488 aaKnown RBP12.92□□□□□ -0.34
TUBA1A-202ENST00000301071 CD109Q6YHK3 1445 aa12.92□□□□□ -0.34
TUBA1A-202ENST00000301071 SAMD9LQ8IVG5 1584 aa12.91□□□□□ -0.34
TUBA1A-202ENST00000301071 ZNF644Q9H582 1327 aaPredicted RBP12.91□□□□□ -0.34
TUBA1A-202ENST00000301071 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.34
TUBA1A-202ENST00000301071 RBM19Q9Y4C8 960 aaKnown RBP12.9□□□□□ -0.34
TUBA1A-202ENST00000301071 PPRC1Q5VV67 1664 aaKnown RBP12.9□□□□□ -0.34
TUBA1A-202ENST00000301071 FAM50AQ14320 339 aaKnown RBP12.9□□□□□ -0.35
TUBA1A-202ENST00000301071 ZNF777Q9ULD5 760 aaPredicted RBP12.9□□□□□ -0.35
TUBA1A-202ENST00000301071 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.89□□□□□ -0.35
TUBA1A-202ENST00000301071 TRHP20396 242 aaPredicted RBP12.89□□□□□ -0.35
TUBA1A-202ENST00000301071 FANCAO15360 1455 aa12.88□□□□□ -0.35
TUBA1A-202ENST00000301071 EFCAB2Q5VUJ9 269 aa12.88□□□□□ -0.35
TUBA1A-202ENST00000301071 CFAP74Q9C0B2 1584 aa12.86□□□□□ -0.35
TUBA1A-202ENST00000301071 ABCC1P33527 1531 aa12.86□□□□□ -0.35
TUBA1A-202ENST00000301071 FKBP8Q14318 412 aa12.86□□□□□ -0.35
TUBA1A-202ENST00000301071 SYCP2Q9BX26 1530 aa12.85□□□□□ -0.35
TUBA1A-202ENST00000301071 DNMT1P26358 1616 aaKnown RBP12.85□□□□□ -0.35
TUBA1A-202ENST00000301071 FANCIQ9NVI1 1328 aa12.85□□□□□ -0.35
TUBA1A-202ENST00000301071 ARHGEF12Q9NZN5 1544 aa12.84□□□□□ -0.35
TUBA1A-202ENST00000301071 CROCC2H7BZ55 1655 aa12.84□□□□□ -0.35
TUBA1A-202ENST00000301071 AKNAQ7Z591 1439 aa12.84□□□□□ -0.35
TUBA1A-202ENST00000301071 PLEKHH2Q8IVE3 1493 aa12.84□□□□□ -0.35
TUBA1A-202ENST00000301071 MBD5Q9P267 1494 aa12.84□□□□□ -0.35
TUBA1A-202ENST00000301071 ARHGEF5Q12774 1597 aa12.83□□□□□ -0.36
TUBA1A-202ENST00000301071 NEO1Q92859 1461 aa12.83□□□□□ -0.36
TUBA1A-202ENST00000301071 KIAA1107Q9UPP5 1409 aa12.83□□□□□ -0.36
TUBA1A-202ENST00000301071 ITGAEP38570 1179 aa12.83□□□□□ -0.36
TUBA1A-202ENST00000301071 HNRNPMP52272 730 aaKnown RBP eCLIP12.82□□□□□ -0.36
TUBA1A-202ENST00000301071 ADGRL1O94910 1474 aa12.82□□□□□ -0.36
TUBA1A-202ENST00000301071 ABCC5O15440 1437 aa12.82□□□□□ -0.36
TUBA1A-202ENST00000301071 DAPK1P53355 1430 aa12.82□□□□□ -0.36
TUBA1A-202ENST00000301071 PTPRKQ15262 1439 aa12.82□□□□□ -0.36
TUBA1A-202ENST00000301071 TEX14Q8IWB6 1497 aa12.81□□□□□ -0.36
TUBA1A-202ENST00000301071 CCDC141Q6ZP82 1450 aa12.8□□□□□ -0.36
TUBA1A-202ENST00000301071 SCAPERQ9BY12 1400 aa12.79□□□□□ -0.36
TUBA1A-202ENST00000301071 CCER2I3L3R5 266 aa12.79□□□□□ -0.36
TUBA1A-202ENST00000301071 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
TUBA1A-202ENST00000301071 ADGBQ8N7X0 1667 aa12.78□□□□□ -0.36
TUBA1A-202ENST00000301071 BCANQ96GW7 911 aa12.78□□□□□ -0.36
TUBA1A-202ENST00000301071 RICTORQ6R327 1708 aa12.77□□□□□ -0.36
TUBA1A-202ENST00000301071 RSPH4AQ5TD94 716 aa12.77□□□□□ -0.37
TUBA1A-202ENST00000301071 SHANK2Q9UPX8 1470 aa12.76□□□□□ -0.37
TUBA1A-202ENST00000301071 MAST1Q9Y2H9 1570 aa12.76□□□□□ -0.37
TUBA1A-202ENST00000301071 CHIC2Q9UKJ5 165 aa12.76□□□□□ -0.37
TUBA1A-202ENST00000301071 DENND4BO75064 1496 aaPredicted RBP12.75□□□□□ -0.37
TUBA1A-202ENST00000301071 AFAP1Q8N556 730 aa12.75□□□□□ -0.37
TUBA1A-202ENST00000301071 C9orf84Q5VXU9 1444 aa12.75□□□□□ -0.37
TUBA1A-202ENST00000301071 POGZQ7Z3K3 1410 aa12.75□□□□□ -0.37
TUBA1A-202ENST00000301071 KDM5CP41229 1560 aa12.74□□□□□ -0.37
TUBA1A-202ENST00000301071 FRMPD1Q5SYB0 1578 aa12.74□□□□□ -0.37
TUBA1A-202ENST00000301071 ZNF518AQ6AHZ1 1483 aa12.74□□□□□ -0.37
TUBA1A-202ENST00000301071 TSPY4P0CV99 314 aa12.74□□□□□ -0.37
TUBA1A-202ENST00000301071 TSPY10P0CW01 314 aa12.74□□□□□ -0.37
TUBA1A-202ENST00000301071 ERICH6BQ5W0A0 696 aa12.74□□□□□ -0.37
TUBA1A-202ENST00000301071 ADGRL2O95490 1459 aa12.73□□□□□ -0.37
TUBA1A-202ENST00000301071 INO80Q9ULG1 1556 aaPredicted RBP12.73□□□□□ -0.37
TUBA1A-202ENST00000301071 COL17A1Q9UMD9 1497 aaPredicted RBP12.73□□□□□ -0.37
TUBA1A-202ENST00000301071 GCC2Q8IWJ2 1684 aa12.73□□□□□ -0.37
TUBA1A-202ENST00000301071 RAPGEF3O95398 923 aa12.72□□□□□ -0.37
TUBA1A-202ENST00000301071 TIMELESSQ9UNS1 1208 aa12.72□□□□□ -0.37
TUBA1A-202ENST00000301071 KIDINS220Q9ULH0 1771 aa12.72□□□□□ -0.37
TUBA1A-202ENST00000301071 ZFYVE16Q7Z3T8 1539 aa12.72□□□□□ -0.37
TUBA1A-202ENST00000301071 ROCK1Q13464 1354 aa12.72□□□□□ -0.37
TUBA1A-202ENST00000301071 NCOA1Q15788 1441 aa12.71□□□□□ -0.37
TUBA1A-202ENST00000301071 RRP7BPQ9NSQ0 103 aa12.71□□□□□ -0.37
TUBA1A-202ENST00000301071 PLXNC1O60486 1568 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms