RNA–Protein interactions for RNA: ENST00000301071.11

TUBA1A-202, Transcript of tubulin alpha 1a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1A, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-202ENST00000301071 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
TUBA1A-202ENST00000301071 CCDC180Q9P1Z9 1646 aa17.5■□□□□ 0.39
TUBA1A-202ENST00000301071 ABCC9O60706 1549 aa16.77■□□□□ 0.27
TUBA1A-202ENST00000301071 ZCCHC6Q5VYS8 1495 aaKnown RBP16.63■□□□□ 0.25
TUBA1A-202ENST00000301071 DCAF8L2P0C7V8 631 aa16.44■□□□□ 0.22
TUBA1A-202ENST00000301071 DCAF1Q9Y4B6 1507 aa16.43■□□□□ 0.22
TUBA1A-202ENST00000301071 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
TUBA1A-202ENST00000301071 NACADO15069 1562 aa16.34■□□□□ 0.21
TUBA1A-202ENST00000301071 RB1CC1Q8TDY2 1594 aa16.27■□□□□ 0.19
TUBA1A-202ENST00000301071 SCRIBQ14160 1630 aa16.02■□□□□ 0.16
TUBA1A-202ENST00000301071 UNC13AQ9UPW8 1703 aa16.01■□□□□ 0.15
TUBA1A-202ENST00000301071 SHROOM4Q9ULL8 1493 aa15.96■□□□□ 0.14
TUBA1A-202ENST00000301071 BICRAQ9NZM4 1560 aa15.81■□□□□ 0.12
TUBA1A-202ENST00000301071 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
TUBA1A-202ENST00000301071 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
TUBA1A-202ENST00000301071 DNAJC5BQ9UF47 199 aa15.37■□□□□ 0.05
TUBA1A-202ENST00000301071 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
TUBA1A-202ENST00000301071 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
TUBA1A-202ENST00000301071 EIF4G1Q04637 1599 aaKnown RBP15.34■□□□□ 0.05
TUBA1A-202ENST00000301071 MROH2BQ7Z745 1585 aa15.34■□□□□ 0.05
TUBA1A-202ENST00000301071 RSF1Q96T23 1441 aaPredicted RBP15.28■□□□□ 0.04
TUBA1A-202ENST00000301071 HRCP23327 699 aa15.25■□□□□ 0.03
TUBA1A-202ENST00000301071 WIZO95785 1651 aa15.22■□□□□ 0.03
TUBA1A-202ENST00000301071 CC2D2AQ9P2K1 1620 aa15.2■□□□□ 0.02
TUBA1A-202ENST00000301071 SUPT5HO00267 1087 aaKnown RBP15.19■□□□□ 0.02
TUBA1A-202ENST00000301071 PEG3Q9GZU2 1588 aa15.18■□□□□ 0.02
TUBA1A-202ENST00000301071 ATAD2BQ9ULI0 1458 aa15.15■□□□□ 0.02
TUBA1A-202ENST00000301071 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
TUBA1A-202ENST00000301071 PELP1Q8IZL8 1130 aaKnown RBP15.14■□□□□ 0.01
TUBA1A-202ENST00000301071 NCAPD3P42695 1498 aa15.07■□□□□ 0
TUBA1A-202ENST00000301071 BAZ1BQ9UIG0 1483 aaKnown RBP15.04■□□□□ -0
TUBA1A-202ENST00000301071 TOP2AP11388 1531 aaKnown RBP15.03■□□□□ -0
TUBA1A-202ENST00000301071 HMGXB3Q12766 1538 aa15.03■□□□□ -0
TUBA1A-202ENST00000301071 CCDC88BA6NC98 1476 aa14.86□□□□□ -0.03
TUBA1A-202ENST00000301071 PCGF6Q9BYE7 350 aa14.73□□□□□ -0.05
TUBA1A-202ENST00000301071 MYT1Q01538 1121 aa14.71□□□□□ -0.05
TUBA1A-202ENST00000301071 CFTRP13569 1480 aa14.65□□□□□ -0.06
TUBA1A-202ENST00000301071 CHIC1Q5VXU3 224 aa14.65□□□□□ -0.06
TUBA1A-202ENST00000301071 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
TUBA1A-202ENST00000301071 PRDM2Q13029 1718 aa14.64□□□□□ -0.07
TUBA1A-202ENST00000301071 NESP48681 1621 aa14.63□□□□□ -0.07
TUBA1A-202ENST00000301071 LAMC3Q9Y6N6 1575 aa14.62□□□□□ -0.07
TUBA1A-202ENST00000301071 PPARGC1BQ86YN6 1023 aaKnown RBP14.6□□□□□ -0.07
TUBA1A-202ENST00000301071 ZEB1P37275 1124 aaPredicted RBP14.58□□□□□ -0.08
TUBA1A-202ENST00000301071 KIF21AQ7Z4S6 1674 aa14.5□□□□□ -0.09
TUBA1A-202ENST00000301071 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
TUBA1A-202ENST00000301071 PDS5BQ9NTI5 1447 aa14.48□□□□□ -0.09
TUBA1A-202ENST00000301071 TRIM26Q12899 539 aaPredicted RBP14.47□□□□□ -0.09
TUBA1A-202ENST00000301071 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
TUBA1A-202ENST00000301071 CEP164Q9UPV0 1460 aa14.43□□□□□ -0.1
TUBA1A-202ENST00000301071 ERCC6Q03468 1493 aa14.39□□□□□ -0.11
TUBA1A-202ENST00000301071 WRNQ14191 1432 aaPredicted RBP eCLIP14.39□□□□□ -0.11
TUBA1A-202ENST00000301071 SYNJ1O43426 1573 aa14.37□□□□□ -0.11
TUBA1A-202ENST00000301071 CUX1P39880 1505 aa14.36□□□□□ -0.11
TUBA1A-202ENST00000301071 BIVM-ERCC5R4GMW8 1640 aa14.34□□□□□ -0.11
TUBA1A-202ENST00000301071 URB2Q14146 1524 aaKnown RBP14.34□□□□□ -0.11
TUBA1A-202ENST00000301071 MRC2Q9UBG0 1479 aa14.34□□□□□ -0.11
TUBA1A-202ENST00000301071 TOP2BQ02880 1626 aa14.33□□□□□ -0.11
TUBA1A-202ENST00000301071 DNMBPQ6XZF7 1577 aa14.33□□□□□ -0.12
TUBA1A-202ENST00000301071 THOC2Q8NI27 1593 aaKnown RBP14.33□□□□□ -0.12
TUBA1A-202ENST00000301071 SCAF1Q9H7N4 1312 aaKnown RBP14.32□□□□□ -0.12
TUBA1A-202ENST00000301071 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
TUBA1A-202ENST00000301071 TRIM41Q8WV44 630 aa14.31□□□□□ -0.12
TUBA1A-202ENST00000301071 WDR62O43379 1518 aa14.29□□□□□ -0.12
TUBA1A-202ENST00000301071 FGD5Q6ZNL6 1462 aa14.24□□□□□ -0.13
TUBA1A-202ENST00000301071 DNAJC5Q9H3Z4 198 aa14.24□□□□□ -0.13
TUBA1A-202ENST00000301071 TTBK1Q5TCY1 1321 aaPredicted RBP14.24□□□□□ -0.13
TUBA1A-202ENST00000301071 POLA1P09884 1462 aaPredicted RBP14.22□□□□□ -0.13
TUBA1A-202ENST00000301071 RAD54L2Q9Y4B4 1467 aa14.17□□□□□ -0.14
TUBA1A-202ENST00000301071 CUX2O14529 1486 aa14.16□□□□□ -0.14
TUBA1A-202ENST00000301071 SOGA1O94964 1423 aa14.15□□□□□ -0.14
TUBA1A-202ENST00000301071 WDR97A6NE52 1622 aa14.15□□□□□ -0.14
TUBA1A-202ENST00000301071 TARBP1Q13395 1621 aaKnown RBP14.15□□□□□ -0.14
TUBA1A-202ENST00000301071 LOC105371045A0A1W2PR82 267 aa14.11□□□□□ -0.15
TUBA1A-202ENST00000301071 ABCA10Q8WWZ4 1543 aa14.11□□□□□ -0.15
TUBA1A-202ENST00000301071 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
TUBA1A-202ENST00000301071 IFT140Q96RY7 1462 aa14.11□□□□□ -0.15
TUBA1A-202ENST00000301071 ACIN1Q9UKV3 1341 aaKnown RBP14.1□□□□□ -0.15
TUBA1A-202ENST00000301071 RUSC2Q8N2Y8 1516 aa14.09□□□□□ -0.15
TUBA1A-202ENST00000301071 CENPBP07199 599 aaPredicted RBP14.05□□□□□ -0.16
TUBA1A-202ENST00000301071 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
TUBA1A-202ENST00000301071 ABCA5Q8WWZ7 1642 aa14.05□□□□□ -0.16
TUBA1A-202ENST00000301071 KIF27Q86VH2 1401 aa14.05□□□□□ -0.16
TUBA1A-202ENST00000301071 TDRD9Q8NDG6 1382 aaKnown RBP14.04□□□□□ -0.16
TUBA1A-202ENST00000301071 FAM9AQ8IZU1 332 aaPredicted RBP14.03□□□□□ -0.16
TUBA1A-202ENST00000301071 EIF4G3O43432 1585 aaKnown RBP14.02□□□□□ -0.17
TUBA1A-202ENST00000301071 AQRO60306 1485 aaKnown RBP eCLIP14.01□□□□□ -0.17
TUBA1A-202ENST00000301071 EEA1Q15075 1411 aa14.01□□□□□ -0.17
TUBA1A-202ENST00000301071 GAPVD1Q14C86 1478 aa14□□□□□ -0.17
TUBA1A-202ENST00000301071 PBRM1Q86U86 1689 aa14□□□□□ -0.17
TUBA1A-202ENST00000301071 CSRNP3Q8WYN3 585 aa13.96□□□□□ -0.18
TUBA1A-202ENST00000301071 IGF1RP08069 1367 aa13.95□□□□□ -0.18
TUBA1A-202ENST00000301071 ERICH3Q5RHP9 1530 aa13.94□□□□□ -0.18
TUBA1A-202ENST00000301071 GRIN2BQ13224 1484 aa13.94□□□□□ -0.18
TUBA1A-202ENST00000301071 CUL7Q14999 1698 aa13.91□□□□□ -0.18
TUBA1A-202ENST00000301071 NEUROD1Q13562 356 aa13.91□□□□□ -0.18
TUBA1A-202ENST00000301071 PRXQ9BXM0 1461 aa13.89□□□□□ -0.19
TUBA1A-202ENST00000301071 KIF21BO75037 1637 aa13.89□□□□□ -0.19
TUBA1A-202ENST00000301071 SNAPC4Q5SXM2 1469 aa13.88□□□□□ -0.19
TUBA1A-202ENST00000301071 GTF3C3Q9Y5Q9 886 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms