RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
COL6A2-201ENST00000300527 PDE4AP27815 886 aa19.59■□□□□ 0.73
COL6A2-201ENST00000300527 SLC4A3P48751 1232 aa19.59■□□□□ 0.73
COL6A2-201ENST00000300527 EIF5BO60841 1220 aaKnown RBP19.58■□□□□ 0.73
COL6A2-201ENST00000300527 KDM2AQ9Y2K7 1162 aa19.58■□□□□ 0.73
COL6A2-201ENST00000300527 PLIN1O60240 522 aa19.56■□□□□ 0.72
COL6A2-201ENST00000300527 TDRD9Q8NDG6 1382 aaKnown RBP19.56■□□□□ 0.72
COL6A2-201ENST00000300527 DAXXQ9UER7 740 aaPredicted RBP19.54■□□□□ 0.72
COL6A2-201ENST00000300527 ZNF777Q9ULD5 760 aaPredicted RBP19.54■□□□□ 0.72
COL6A2-201ENST00000300527 HMGXB3Q12766 1538 aa19.53■□□□□ 0.72
COL6A2-201ENST00000300527 RRP1P56182 461 aaKnown RBP19.53■□□□□ 0.72
COL6A2-201ENST00000300527 BRPF3Q9ULD4 1205 aa19.53■□□□□ 0.72
COL6A2-201ENST00000300527 ZNF644Q9H582 1327 aaPredicted RBP19.53■□□□□ 0.72
COL6A2-201ENST00000300527 RCAN3Q9UKA8 241 aa19.52■□□□□ 0.72
COL6A2-201ENST00000300527 PNISRQ8TF01 805 aaKnown RBP19.52■□□□□ 0.72
COL6A2-201ENST00000300527 DENND4BO75064 1496 aaPredicted RBP19.51■□□□□ 0.71
COL6A2-201ENST00000300527 TCERG1O14776 1098 aaKnown RBP19.49■□□□□ 0.71
COL6A2-201ENST00000300527 KDM6BO15054 1643 aa19.49■□□□□ 0.71
COL6A2-201ENST00000300527 USP47Q96K76 1375 aa19.48■□□□□ 0.71
COL6A2-201ENST00000300527 EFCAB5A4FU69 1503 aa19.48■□□□□ 0.71
COL6A2-201ENST00000300527 SNAPC4Q5SXM2 1469 aa19.48■□□□□ 0.71
COL6A2-201ENST00000300527 CARD11Q9BXL7 1154 aa19.48■□□□□ 0.71
COL6A2-201ENST00000300527 CDCA7LQ96GN5 454 aa19.47■□□□□ 0.71
COL6A2-201ENST00000300527 FANCD2Q9BXW9 1451 aa19.45■□□□□ 0.7
COL6A2-201ENST00000300527 PPM1GO15355 546 aaPredicted RBP19.45■□□□□ 0.7
COL6A2-201ENST00000300527 ANKRD30BQ9BXX2 1392 aa19.45■□□□□ 0.7
COL6A2-201ENST00000300527 RNF123Q5XPI4 1314 aa19.45■□□□□ 0.7
COL6A2-201ENST00000300527 BACH2Q9BYV9 841 aa19.45■□□□□ 0.7
COL6A2-201ENST00000300527 DHX29Q7Z478 1369 aaKnown RBP19.44■□□□□ 0.7
COL6A2-201ENST00000300527 PKD2Q13563 968 aa19.42■□□□□ 0.7
COL6A2-201ENST00000300527 ST20-MTHFSA0A0A6YYL1 179 aa19.41■□□□□ 0.7
COL6A2-201ENST00000300527 CRBNQ96SW2 442 aa19.39■□□□□ 0.7
COL6A2-201ENST00000300527 POLA1P09884 1462 aaPredicted RBP19.39■□□□□ 0.7
COL6A2-201ENST00000300527 SUPT6HQ7KZ85 1726 aaKnown RBP19.39■□□□□ 0.69
COL6A2-201ENST00000300527 CC2D1BQ5T0F9 858 aaKnown RBP19.39■□□□□ 0.69
COL6A2-201ENST00000300527 RPRD2Q5VT52 1461 aaKnown RBP19.37■□□□□ 0.69
COL6A2-201ENST00000300527 SPATA31E1Q6ZUB1 1445 aa19.37■□□□□ 0.69
COL6A2-201ENST00000300527 MAGI3Q5TCQ9 1506 aa19.36■□□□□ 0.69
COL6A2-201ENST00000300527 EHBP1L1Q8N3D4 1523 aa19.36■□□□□ 0.69
COL6A2-201ENST00000300527 NFKBIBQ15653 356 aa19.36■□□□□ 0.69
COL6A2-201ENST00000300527 GSE1Q14687 1217 aa19.36■□□□□ 0.69
COL6A2-201ENST00000300527 USP35Q9P2H5 1018 aa19.36■□□□□ 0.69
COL6A2-201ENST00000300527 RGS3P49796 1198 aa19.35■□□□□ 0.69
COL6A2-201ENST00000300527 GRIN2BQ13224 1484 aa19.35■□□□□ 0.69
COL6A2-201ENST00000300527 FRAT1Q92837 279 aaPredicted RBP19.35■□□□□ 0.69
COL6A2-201ENST00000300527 ARXQ96QS3 562 aa19.34■□□□□ 0.69
COL6A2-201ENST00000300527 DCAF11Q8TEB1 546 aa19.34■□□□□ 0.69
COL6A2-201ENST00000300527 DDRGK1Q96HY6 314 aa19.34■□□□□ 0.69
COL6A2-201ENST00000300527 CDK13Q14004 1512 aaKnown RBP19.33■□□□□ 0.69
COL6A2-201ENST00000300527 MYBBP1AQ9BQG0 1328 aaKnown RBP19.33■□□□□ 0.69
COL6A2-201ENST00000300527 UGGT2Q9NYU1 1516 aa19.33■□□□□ 0.69
COL6A2-201ENST00000300527 TEX14Q8IWB6 1497 aa19.32■□□□□ 0.68
COL6A2-201ENST00000300527 ABCA10Q8WWZ4 1543 aa19.31■□□□□ 0.68
COL6A2-201ENST00000300527 NESP48681 1621 aa19.31■□□□□ 0.68
COL6A2-201ENST00000300527 KIF15Q9NS87 1388 aa19.31■□□□□ 0.68
COL6A2-201ENST00000300527 C20orf194Q5TEA3 1177 aa19.31■□□□□ 0.68
COL6A2-201ENST00000300527 RGL3Q3MIN7 710 aa19.3■□□□□ 0.68
COL6A2-201ENST00000300527 HECW1Q76N89 1606 aa19.3■□□□□ 0.68
COL6A2-201ENST00000300527 TOPBP1Q92547 1522 aa19.3■□□□□ 0.68
COL6A2-201ENST00000300527 MS4A1P11836 297 aa19.3■□□□□ 0.68
COL6A2-201ENST00000300527 CFDP1Q9UEE9 299 aaPredicted RBP19.29■□□□□ 0.68
COL6A2-201ENST00000300527 RALBP1Q15311 655 aa19.27■□□□□ 0.67
COL6A2-201ENST00000300527 DAPK1P53355 1430 aa19.26■□□□□ 0.67
COL6A2-201ENST00000300527 NLRP13Q86W25 1043 aa19.26■□□□□ 0.67
COL6A2-201ENST00000300527 FRAT2O75474 233 aaPredicted RBP19.25■□□□□ 0.67
COL6A2-201ENST00000300527 MIA2Q96PC5 1412 aa19.25■□□□□ 0.67
COL6A2-201ENST00000300527 LRRIQ1Q96JM4 1722 aa19.25■□□□□ 0.67
COL6A2-201ENST00000300527 CTTNBP2Q8WZ74 1663 aa19.24■□□□□ 0.67
COL6A2-201ENST00000300527 WASHC2CQ9Y4E1 1318 aa19.24■□□□□ 0.67
COL6A2-201ENST00000300527 ABCC5O15440 1437 aa19.23■□□□□ 0.67
COL6A2-201ENST00000300527 BRD4O60885 1362 aaPredicted RBP19.23■□□□□ 0.67
COL6A2-201ENST00000300527 TCOF1Q13428 1488 aaKnown RBP19.22■□□□□ 0.67
COL6A2-201ENST00000300527 EPRSP07814 1512 aaKnown RBP19.22■□□□□ 0.67
COL6A2-201ENST00000300527 GAPVD1Q14C86 1478 aa19.22■□□□□ 0.67
COL6A2-201ENST00000300527 KTN1Q86UP2 1357 aaKnown RBP19.21■□□□□ 0.67
COL6A2-201ENST00000300527 ROCK2O75116 1388 aaKnown RBP19.2■□□□□ 0.66
COL6A2-201ENST00000300527 GCC2Q8IWJ2 1684 aa19.2■□□□□ 0.66
COL6A2-201ENST00000300527 DNMBPQ6XZF7 1577 aa19.2■□□□□ 0.66
COL6A2-201ENST00000300527 BCORL1Q5H9F3 1711 aa19.2■□□□□ 0.66
COL6A2-201ENST00000300527 NUP155O75694 1391 aa19.19■□□□□ 0.66
COL6A2-201ENST00000300527 PDE3BQ13370 1112 aa19.18■□□□□ 0.66
COL6A2-201ENST00000300527 CUL7Q14999 1698 aa19.18■□□□□ 0.66
COL6A2-201ENST00000300527 LRPPRCP42704 1394 aaKnown RBP19.17■□□□□ 0.66
COL6A2-201ENST00000300527 THOC2Q8NI27 1593 aaKnown RBP19.17■□□□□ 0.66
COL6A2-201ENST00000300527 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
COL6A2-201ENST00000300527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.14■□□□□ 0.65
COL6A2-201ENST00000300527 SLKQ9H2G2 1235 aaPredicted RBP19.14■□□□□ 0.65
COL6A2-201ENST00000300527 KIAA1107Q9UPP5 1409 aa19.14■□□□□ 0.65
COL6A2-201ENST00000300527 NBPF1Q3BBV0 1214 aa19.14■□□□□ 0.65
COL6A2-201ENST00000300527 ARID4BQ4LE39 1312 aaPredicted RBP19.13■□□□□ 0.65
COL6A2-201ENST00000300527 SAMD9Q5K651 1589 aa19.13■□□□□ 0.65
COL6A2-201ENST00000300527 FAM161AQ3B820 660 aa19.13■□□□□ 0.65
COL6A2-201ENST00000300527 PANK3Q9H999 370 aa19.13■□□□□ 0.65
COL6A2-201ENST00000300527 ARHGEF11O15085 1522 aa19.13■□□□□ 0.65
COL6A2-201ENST00000300527 ROCK1Q13464 1354 aa19.12■□□□□ 0.65
COL6A2-201ENST00000300527 PZPP20742 1482 aa19.12■□□□□ 0.65
COL6A2-201ENST00000300527 PRDM2Q13029 1718 aa19.11■□□□□ 0.65
COL6A2-201ENST00000300527 WDR43Q15061 677 aaKnown RBP eCLIP19.11■□□□□ 0.65
COL6A2-201ENST00000300527 ADAMTS8Q9UP79 889 aa19.11■□□□□ 0.65
COL6A2-201ENST00000300527 CCDC146Q8IYE0 955 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms