RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ABCC2Q92887 1545 aa9.58□□□□□ -0.88
SSX3-201ENST00000298396 PRR29P0C7W0 189 aa9.58□□□□□ -0.88
SSX3-201ENST00000298396 CREBZFQ9NS37 354 aa9.58□□□□□ -0.88
SSX3-201ENST00000298396 PCF11O94913 1555 aaKnown RBP9.58□□□□□ -0.88
SSX3-201ENST00000298396 ZCCHC11Q5TAX3 1644 aaKnown RBP9.57□□□□□ -0.88
SSX3-201ENST00000298396 CYB5RLQ6IPT4 315 aa9.57□□□□□ -0.88
SSX3-201ENST00000298396 UHRF1BP1LA0JNW5 1464 aa9.57□□□□□ -0.88
SSX3-201ENST00000298396 MIER1Q8N108 512 aa9.56□□□□□ -0.88
SSX3-201ENST00000298396 PLCD3Q8N3E9 789 aa9.56□□□□□ -0.88
SSX3-201ENST00000298396 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
SSX3-201ENST00000298396 UACAQ9BZF9 1416 aa9.56□□□□□ -0.88
SSX3-201ENST00000298396 MNX1P50219 401 aaPredicted RBP9.55□□□□□ -0.88
SSX3-201ENST00000298396 TTBK1Q5TCY1 1321 aaPredicted RBP9.55□□□□□ -0.88
SSX3-201ENST00000298396 NUP153P49790 1475 aaKnown RBP9.54□□□□□ -0.88
SSX3-201ENST00000298396 FXR2P51116 673 aaKnown RBP eCLIP9.54□□□□□ -0.88
SSX3-201ENST00000298396 KIF13AQ9H1H9 1805 aa9.54□□□□□ -0.88
SSX3-201ENST00000298396 KDM5BQ9UGL1 1544 aa9.53□□□□□ -0.88
SSX3-201ENST00000298396 HECW1Q76N89 1606 aa9.53□□□□□ -0.88
SSX3-201ENST00000298396 CHRDL2Q6WN34 429 aa9.52□□□□□ -0.89
SSX3-201ENST00000298396 ZBTB47Q9UFB7 747 aaPredicted RBP9.52□□□□□ -0.89
SSX3-201ENST00000298396 FMN1Q68DA7 1419 aa9.51□□□□□ -0.89
SSX3-201ENST00000298396 CDK13Q14004 1512 aaKnown RBP9.51□□□□□ -0.89
SSX3-201ENST00000298396 PLEKHG5O94827 1062 aa9.5□□□□□ -0.89
SSX3-201ENST00000298396 SPOCK2Q92563 424 aa9.5□□□□□ -0.89
SSX3-201ENST00000298396 MAPKBP1O60336 1514 aa9.5□□□□□ -0.89
SSX3-201ENST00000298396 CASKIN1Q8WXD9 1431 aa9.49□□□□□ -0.89
SSX3-201ENST00000298396 CFAP43Q8NDM7 1665 aa9.49□□□□□ -0.89
SSX3-201ENST00000298396 ATP10BO94823 1461 aa9.49□□□□□ -0.89
SSX3-201ENST00000298396 FYCO1Q9BQS8 1478 aa9.49□□□□□ -0.89
SSX3-201ENST00000298396 EPRSP07814 1512 aaKnown RBP9.48□□□□□ -0.89
SSX3-201ENST00000298396 VPS8Q8N3P4 1428 aa9.48□□□□□ -0.89
SSX3-201ENST00000298396 MAGI3Q5TCQ9 1506 aa9.47□□□□□ -0.89
SSX3-201ENST00000298396 DIP2BQ9P265 1576 aa9.46□□□□□ -0.89
SSX3-201ENST00000298396 KLHL34Q8N239 644 aa9.46□□□□□ -0.9
SSX3-201ENST00000298396 ARID3CA6NKF2 412 aa9.45□□□□□ -0.9
SSX3-201ENST00000298396 ASXL2Q76L83 1435 aa9.45□□□□□ -0.9
SSX3-201ENST00000298396 PPRC1Q5VV67 1664 aaKnown RBP9.45□□□□□ -0.9
SSX3-201ENST00000298396 NUBP1P53384 320 aa9.44□□□□□ -0.9
SSX3-201ENST00000298396 PIP4P2Q8N4L2 257 aa9.44□□□□□ -0.9
SSX3-201ENST00000298396 KIF14Q15058 1648 aa9.44□□□□□ -0.9
SSX3-201ENST00000298396 TSPOAP1O95153 1857 aa9.44□□□□□ -0.9
SSX3-201ENST00000298396 TIAM1Q13009 1591 aa9.43□□□□□ -0.9
SSX3-201ENST00000298396 WDR7Q9Y4E6 1490 aa9.43□□□□□ -0.9
SSX3-201ENST00000298396 CCDC18Q5T9S5 1454 aa9.42□□□□□ -0.9
SSX3-201ENST00000298396 MAP3K4Q9Y6R4 1608 aa9.42□□□□□ -0.9
SSX3-201ENST00000298396 GLI2P10070 1586 aa9.41□□□□□ -0.9
SSX3-201ENST00000298396 TTC37Q6PGP7 1564 aa9.41□□□□□ -0.9
SSX3-201ENST00000298396 PKD2Q13563 968 aa9.41□□□□□ -0.9
SSX3-201ENST00000298396 ABCA9Q8IUA7 1624 aa9.41□□□□□ -0.9
SSX3-201ENST00000298396 ABCC10Q5T3U5 1492 aa9.4□□□□□ -0.9
SSX3-201ENST00000298396 PRKAR2AP13861 404 aaKnown RBP9.4□□□□□ -0.9
SSX3-201ENST00000298396 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
SSX3-201ENST00000298396 CDC42BPAQ5VT25 1732 aa9.39□□□□□ -0.91
SSX3-201ENST00000298396 FARP1Q9Y4F1 1045 aaPredicted RBP9.39□□□□□ -0.91
SSX3-201ENST00000298396 MAP3K1Q13233 1512 aa9.39□□□□□ -0.91
SSX3-201ENST00000298396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.39□□□□□ -0.91
SSX3-201ENST00000298396 CDC42BPBQ9Y5S2 1711 aa9.38□□□□□ -0.91
SSX3-201ENST00000298396 MYO5CQ9NQX4 1742 aa9.37□□□□□ -0.91
SSX3-201ENST00000298396 NPM1P06748 294 aaKnown RBP eCLIP9.37□□□□□ -0.91
SSX3-201ENST00000298396 ATP1B4Q9UN42 357 aaPredicted RBP9.37□□□□□ -0.91
SSX3-201ENST00000298396 TROQ12816 1431 aaPredicted RBP9.37□□□□□ -0.91
SSX3-201ENST00000298396 EHBP1L1Q8N3D4 1523 aa9.36□□□□□ -0.91
SSX3-201ENST00000298396 LRRC9Q6ZRR7 1453 aa9.35□□□□□ -0.91
SSX3-201ENST00000298396 SUPT6HQ7KZ85 1726 aaKnown RBP9.35□□□□□ -0.91
SSX3-201ENST00000298396 PREX2Q70Z35 1606 aa9.34□□□□□ -0.91
SSX3-201ENST00000298396 KANK4Q5T7N3 995 aaPredicted RBP9.33□□□□□ -0.92
SSX3-201ENST00000298396 RASEFQ8IZ41 740 aa9.33□□□□□ -0.92
SSX3-201ENST00000298396 PLEKHD1A6NEE1 506 aa9.32□□□□□ -0.92
SSX3-201ENST00000298396 FAM69CQ0P6D2 419 aa9.32□□□□□ -0.92
SSX3-201ENST00000298396 KCNH8Q96L42 1107 aa9.32□□□□□ -0.92
SSX3-201ENST00000298396 GSE1Q14687 1217 aa9.31□□□□□ -0.92
SSX3-201ENST00000298396 ITSN2Q9NZM3 1697 aa9.31□□□□□ -0.92
SSX3-201ENST00000298396 NCOA2Q15596 1464 aa9.3□□□□□ -0.92
SSX3-201ENST00000298396 MTUS2Q5JR59 1369 aa9.3□□□□□ -0.92
SSX3-201ENST00000298396 ARAP3Q8WWN8 1544 aa9.29□□□□□ -0.92
SSX3-201ENST00000298396 CD109Q6YHK3 1445 aa9.29□□□□□ -0.92
SSX3-201ENST00000298396 GPATCH8Q9UKJ3 1502 aaKnown RBP9.28□□□□□ -0.92
SSX3-201ENST00000298396 FAM212AQ96EL1 285 aa9.28□□□□□ -0.92
SSX3-201ENST00000298396 CDK11AQ9UQ88 783 aaPredicted RBP9.28□□□□□ -0.92
SSX3-201ENST00000298396 SAMD9LQ8IVG5 1584 aa9.28□□□□□ -0.92
SSX3-201ENST00000298396 CFAP74Q9C0B2 1584 aa9.28□□□□□ -0.92
SSX3-201ENST00000298396 RICTORQ6R327 1708 aa9.28□□□□□ -0.92
SSX3-201ENST00000298396 PLCH2O75038 1416 aa9.27□□□□□ -0.93
SSX3-201ENST00000298396 FRMPD1Q5SYB0 1578 aa9.27□□□□□ -0.93
SSX3-201ENST00000298396 PHLDB1Q86UU1 1377 aa9.26□□□□□ -0.93
SSX3-201ENST00000298396 CHRM1P11229 460 aaPredicted RBP9.26□□□□□ -0.93
SSX3-201ENST00000298396 COL17A1Q9UMD9 1497 aaPredicted RBP9.26□□□□□ -0.93
SSX3-201ENST00000298396 ABCC1P33527 1531 aa9.25□□□□□ -0.93
SSX3-201ENST00000298396 ARHGAP5Q13017 1502 aa9.25□□□□□ -0.93
SSX3-201ENST00000298396 FANCAO15360 1455 aa9.24□□□□□ -0.93
SSX3-201ENST00000298396 TEX14Q8IWB6 1497 aa9.24□□□□□ -0.93
SSX3-201ENST00000298396 NEO1Q92859 1461 aa9.24□□□□□ -0.93
SSX3-201ENST00000298396 ECM2O94769 699 aaPredicted RBP9.24□□□□□ -0.93
SSX3-201ENST00000298396 PPARGC1BQ86YN6 1023 aaKnown RBP9.24□□□□□ -0.93
SSX3-201ENST00000298396 CIZ1Q9ULV3 898 aaPredicted RBP9.24□□□□□ -0.93
SSX3-201ENST00000298396 ARHGEF12Q9NZN5 1544 aa9.24□□□□□ -0.93
SSX3-201ENST00000298396 MYOM3Q5VTT5 1437 aa9.23□□□□□ -0.93
SSX3-201ENST00000298396 KDM6BO15054 1643 aa9.23□□□□□ -0.93
SSX3-201ENST00000298396 PTPN23Q9H3S7 1636 aa9.23□□□□□ -0.93
SSX3-201ENST00000298396 CCNB3Q8WWL7 1395 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms