RNA–Protein interactions for RNA: ENST00000297273.8

CASD1-201, Transcript of CAS1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASD1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1-201ENST00000297273 NUDCQ9Y266 331 aa24.48■■□□□ 1.51
CASD1-201ENST00000297273 EXOC6Q8TAG9 804 aa24.48■■□□□ 1.51
CASD1-201ENST00000297273 UACAQ9BZF9 1416 aa24.47■■□□□ 1.51
CASD1-201ENST00000297273 AQRO60306 1485 aaKnown RBP eCLIP24.47■■□□□ 1.51
CASD1-201ENST00000297273 RCAN3Q9UKA8 241 aa24.46■■□□□ 1.51
CASD1-201ENST00000297273 NCOA2Q15596 1464 aa24.45■■□□□ 1.51
CASD1-201ENST00000297273 SLC4A3P48751 1232 aa24.45■■□□□ 1.5
CASD1-201ENST00000297273 TIAM1Q13009 1591 aa24.45■■□□□ 1.5
CASD1-201ENST00000297273 FRAT1Q92837 279 aaPredicted RBP24.44■■□□□ 1.5
CASD1-201ENST00000297273 CCDC7Q96M83 1385 aa24.43■■□□□ 1.5
CASD1-201ENST00000297273 MYOM3Q5VTT5 1437 aa24.43■■□□□ 1.5
CASD1-201ENST00000297273 PLPPR3Q6T4P5 718 aa24.41■■□□□ 1.5
CASD1-201ENST00000297273 CCDC146Q8IYE0 955 aa24.41■■□□□ 1.5
CASD1-201ENST00000297273 SKAP1Q86WV1 359 aa24.4■■□□□ 1.5
CASD1-201ENST00000297273 ROCK2O75116 1388 aaKnown RBP24.4■■□□□ 1.5
CASD1-201ENST00000297273 USP47Q96K76 1375 aa24.39■■□□□ 1.49
CASD1-201ENST00000297273 SAFB2Q14151 953 aaKnown RBP eCLIP24.39■■□□□ 1.49
CASD1-201ENST00000297273 PAK3O75914 559 aaPredicted RBP24.38■■□□□ 1.49
CASD1-201ENST00000297273 GAPVD1Q14C86 1478 aa24.38■■□□□ 1.49
CASD1-201ENST00000297273 ZBED9Q6R2W3 1325 aa24.38■■□□□ 1.49
CASD1-201ENST00000297273 AKNAQ7Z591 1439 aa24.37■■□□□ 1.49
CASD1-201ENST00000297273 CASKIN1Q8WXD9 1431 aa24.37■■□□□ 1.49
CASD1-201ENST00000297273 JPH4Q96JJ6 628 aa24.37■■□□□ 1.49
CASD1-201ENST00000297273 MAPKBP1O60336 1514 aa24.37■■□□□ 1.49
CASD1-201ENST00000297273 CDCA7LQ96GN5 454 aa24.37■■□□□ 1.49
CASD1-201ENST00000297273 SLC24A1O60721 1099 aa24.36■■□□□ 1.49
CASD1-201ENST00000297273 PTPRKQ15262 1439 aa24.34■■□□□ 1.49
CASD1-201ENST00000297273 NAIPQ13075 1403 aa24.32■■□□□ 1.48
CASD1-201ENST00000297273 PANK3Q9H999 370 aa24.31■■□□□ 1.48
CASD1-201ENST00000297273 POLA1P09884 1462 aaPredicted RBP24.31■■□□□ 1.48
CASD1-201ENST00000297273 SPRYD3Q8NCJ5 442 aa24.29■■□□□ 1.48
CASD1-201ENST00000297273 PPM1GO15355 546 aaPredicted RBP24.29■■□□□ 1.48
CASD1-201ENST00000297273 ERCC6Q03468 1493 aa24.29■■□□□ 1.48
CASD1-201ENST00000297273 NUTM2DQ5VT03 806 aaPredicted RBP24.29■■□□□ 1.48
CASD1-201ENST00000297273 PCF11O94913 1555 aaKnown RBP24.29■■□□□ 1.48
CASD1-201ENST00000297273 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.29■■□□□ 1.48
CASD1-201ENST00000297273 TMF1P82094 1093 aa24.28■■□□□ 1.48
CASD1-201ENST00000297273 NBPF1Q3BBV0 1214 aa24.28■■□□□ 1.48
CASD1-201ENST00000297273 CNTLNQ9NXG0 1405 aa24.26■■□□□ 1.47
CASD1-201ENST00000297273 ANKRD30AQ9BXX3 1397 aa24.26■■□□□ 1.47
CASD1-201ENST00000297273 IPO9Q96P70 1041 aaKnown RBP24.25■■□□□ 1.47
CASD1-201ENST00000297273 HFM1A2PYH4 1435 aa24.24■■□□□ 1.47
CASD1-201ENST00000297273 KTN1Q86UP2 1357 aaKnown RBP24.24■■□□□ 1.47
CASD1-201ENST00000297273 NLRP13Q86W25 1043 aa24.22■■□□□ 1.47
CASD1-201ENST00000297273 CRBNQ96SW2 442 aa24.21■■□□□ 1.47
CASD1-201ENST00000297273 RRP7AQ9Y3A4 280 aaKnown RBP24.2■■□□□ 1.47
CASD1-201ENST00000297273 FYCO1Q9BQS8 1478 aa24.2■■□□□ 1.46
CASD1-201ENST00000297273 CLUAP1Q96AJ1 413 aa24.19■■□□□ 1.46
CASD1-201ENST00000297273 FANCIQ9NVI1 1328 aa24.19■■□□□ 1.46
CASD1-201ENST00000297273 TOPBP1Q92547 1522 aa24.19■■□□□ 1.46
CASD1-201ENST00000297273 ERICH6BQ5W0A0 696 aa24.19■■□□□ 1.46
CASD1-201ENST00000297273 CDK13Q14004 1512 aaKnown RBP24.18■■□□□ 1.46
CASD1-201ENST00000297273 RRP1P56182 461 aaKnown RBP24.18■■□□□ 1.46
CASD1-201ENST00000297273 BCL2L13Q9BXK5 485 aa24.18■■□□□ 1.46
CASD1-201ENST00000297273 STAG3Q9UJ98 1225 aa24.18■■□□□ 1.46
CASD1-201ENST00000297273 PLEKHG5O94827 1062 aa24.17■■□□□ 1.46
CASD1-201ENST00000297273 PDE4AP27815 886 aa24.17■■□□□ 1.46
CASD1-201ENST00000297273 RALBP1Q15311 655 aa24.16■■□□□ 1.46
CASD1-201ENST00000297273 PEG3Q9GZU2 1588 aa24.14■■□□□ 1.46
CASD1-201ENST00000297273 PRG4Q92954 1404 aaPredicted RBP24.14■■□□□ 1.46
CASD1-201ENST00000297273 MYBBP1AQ9BQG0 1328 aaKnown RBP24.14■■□□□ 1.46
CASD1-201ENST00000297273 U2SURPO15042 1029 aaKnown RBP24.13■■□□□ 1.45
CASD1-201ENST00000297273 GGT6Q6P531 493 aa24.13■■□□□ 1.45
CASD1-201ENST00000297273 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.13■■□□□ 1.45
CASD1-201ENST00000297273 SLKQ9H2G2 1235 aaPredicted RBP24.13■■□□□ 1.45
CASD1-201ENST00000297273 UPF2Q9HAU5 1272 aaKnown RBP24.12■■□□□ 1.45
CASD1-201ENST00000297273 HSP90AA1P07900 732 aaKnown RBP24.12■■□□□ 1.45
CASD1-201ENST00000297273 PNISRQ8TF01 805 aaKnown RBP24.11■■□□□ 1.45
CASD1-201ENST00000297273 STK26Q9P289 416 aa24.1■■□□□ 1.45
CASD1-201ENST00000297273 KIF15Q9NS87 1388 aa24.07■■□□□ 1.44
CASD1-201ENST00000297273 KIF3BO15066 747 aa24.07■■□□□ 1.44
CASD1-201ENST00000297273 APAF1O14727 1248 aa24.06■■□□□ 1.44
CASD1-201ENST00000297273 PRDM2Q13029 1718 aa24.06■■□□□ 1.44
CASD1-201ENST00000297273 HMGXB3Q12766 1538 aa24.06■■□□□ 1.44
CASD1-201ENST00000297273 ADAMTS8Q9UP79 889 aa24.05■■□□□ 1.44
CASD1-201ENST00000297273 TCERG1O14776 1098 aaKnown RBP24.05■■□□□ 1.44
CASD1-201ENST00000297273 CC2D2AQ9P2K1 1620 aa24.04■■□□□ 1.44
CASD1-201ENST00000297273 NPM1P06748 294 aaKnown RBP eCLIP24.04■■□□□ 1.44
CASD1-201ENST00000297273 DDRGK1Q96HY6 314 aa24.04■■□□□ 1.44
CASD1-201ENST00000297273 BIVM-ERCC5R4GMW8 1640 aa24.03■■□□□ 1.44
CASD1-201ENST00000297273 TRAK1Q9UPV9 953 aa24.03■■□□□ 1.44
CASD1-201ENST00000297273 ANKRD50Q9ULJ7 1429 aa24.02■■□□□ 1.44
CASD1-201ENST00000297273 CARMIL2Q6F5E8 1435 aa24.01■■□□□ 1.43
CASD1-201ENST00000297273 GOLGA2Q08379 1002 aa24.01■■□□□ 1.43
CASD1-201ENST00000297273 MORC1Q86VD1 984 aa24.01■■□□□ 1.43
CASD1-201ENST00000297273 FTSJ3Q8IY81 847 aaKnown RBP24.01■■□□□ 1.43
CASD1-201ENST00000297273 CDCA8Q53HL2 280 aa23.99■■□□□ 1.43
CASD1-201ENST00000297273 CCDC144AA2RUR9 1427 aa23.99■■□□□ 1.43
CASD1-201ENST00000297273 ANKRD30BQ9BXX2 1392 aa23.96■■□□□ 1.43
CASD1-201ENST00000297273 COG6Q9Y2V7 657 aa23.96■■□□□ 1.43
CASD1-201ENST00000297273 GZF1Q9H116 711 aaPredicted RBP23.96■■□□□ 1.43
CASD1-201ENST00000297273 SOX12O15370 315 aa23.96■■□□□ 1.43
CASD1-201ENST00000297273 U2AF1L5P0DN76 240 aaPredicted RBP23.94■■□□□ 1.42
CASD1-201ENST00000297273 U2AF1Q01081 240 aaKnown RBP eCLIP23.94■■□□□ 1.42
CASD1-201ENST00000297273 TPRNQ4KMQ1 711 aa23.94■■□□□ 1.42
CASD1-201ENST00000297273 C20orf194Q5TEA3 1177 aa23.94■■□□□ 1.42
CASD1-201ENST00000297273 AFAP1Q8N556 730 aa23.92■■□□□ 1.42
CASD1-201ENST00000297273 EPRSP07814 1512 aaKnown RBP23.91■■□□□ 1.42
CASD1-201ENST00000297273 DAPK1P53355 1430 aa23.91■■□□□ 1.42
CASD1-201ENST00000297273 ABCA10Q8WWZ4 1543 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms