RNA–Protein interactions for RNA: ENST00000296799.8

ARHGEF28-202, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGEF28, Length 4,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-202ENST00000296799 AQRO60306 1485 aaKnown RBP eCLIP19.82■□□□□ 0.766e-7■■■□□ 16.2
ARHGEF28-202ENST00000296799 LAS1LQ9Y4W2 734 aaKnown RBP19.82■□□□□ 0.76
ARHGEF28-202ENST00000296799 CYB5RLQ6IPT4 315 aa19.81■□□□□ 0.76
ARHGEF28-202ENST00000296799 OSCARQ8IYS5 282 aa19.81■□□□□ 0.76
ARHGEF28-202ENST00000296799 ROCK2O75116 1388 aaKnown RBP19.81■□□□□ 0.76
ARHGEF28-202ENST00000296799 CFTRP13569 1480 aa19.8■□□□□ 0.76
ARHGEF28-202ENST00000296799 WASHC2CQ9Y4E1 1318 aa19.79■□□□□ 0.76
ARHGEF28-202ENST00000296799 CCER2I3L3R5 266 aa19.79■□□□□ 0.76
ARHGEF28-202ENST00000296799 MORC1Q86VD1 984 aa19.78■□□□□ 0.76
ARHGEF28-202ENST00000296799 SOX12O15370 315 aa19.77■□□□□ 0.76
ARHGEF28-202ENST00000296799 FTSJ3Q8IY81 847 aaKnown RBP19.76■□□□□ 0.75
ARHGEF28-202ENST00000296799 DHX57Q6P158 1386 aaKnown RBP19.74■□□□□ 0.75
ARHGEF28-202ENST00000296799 FRAT1Q92837 279 aaPredicted RBP19.74■□□□□ 0.75
ARHGEF28-202ENST00000296799 NESP48681 1621 aa19.73■□□□□ 0.75
ARHGEF28-202ENST00000296799 NUTM2DQ5VT03 806 aaPredicted RBP19.69■□□□□ 0.74
ARHGEF28-202ENST00000296799 KTN1Q86UP2 1357 aaKnown RBP19.69■□□□□ 0.74
ARHGEF28-202ENST00000296799 HDGFL2Q7Z4V5 671 aaPredicted RBP19.68■□□□□ 0.74
ARHGEF28-202ENST00000296799 PNNQ9H307 717 aaKnown RBP19.68■□□□□ 0.74
ARHGEF28-202ENST00000296799 ZNF644Q9H582 1327 aaPredicted RBP19.67■□□□□ 0.74
ARHGEF28-202ENST00000296799 ARXQ96QS3 562 aa19.67■□□□□ 0.74
ARHGEF28-202ENST00000296799 PPP4R2Q9NY27 417 aa19.67■□□□□ 0.74
ARHGEF28-202ENST00000296799 SYNJ1O43426 1573 aa19.64■□□□□ 0.73
ARHGEF28-202ENST00000296799 KIF21BO75037 1637 aa19.63■□□□□ 0.73
ARHGEF28-202ENST00000296799 GRIN2BQ13224 1484 aa19.63■□□□□ 0.73
ARHGEF28-202ENST00000296799 CCDC144AA2RUR9 1427 aa19.63■□□□□ 0.73
ARHGEF28-202ENST00000296799 RALBP1Q15311 655 aa19.62■□□□□ 0.73
ARHGEF28-202ENST00000296799 ST20-MTHFSA0A0A6YYL1 179 aa19.62■□□□□ 0.73
ARHGEF28-202ENST00000296799 NBR1Q14596 966 aa19.62■□□□□ 0.73
ARHGEF28-202ENST00000296799 CC2D2AQ9P2K1 1620 aa19.61■□□□□ 0.73
ARHGEF28-202ENST00000296799 PHLDB1Q86UU1 1377 aa19.61■□□□□ 0.73
ARHGEF28-202ENST00000296799 B4GALNT3Q6L9W6 998 aa19.6■□□□□ 0.73
ARHGEF28-202ENST00000296799 MYOM3Q5VTT5 1437 aa19.6■□□□□ 0.73
ARHGEF28-202ENST00000296799 TRAK1Q9UPV9 953 aa19.6■□□□□ 0.73
ARHGEF28-202ENST00000296799 FGD6Q6ZV73 1430 aa19.6■□□□□ 0.73
ARHGEF28-202ENST00000296799 U2AF1L5P0DN76 240 aaPredicted RBP19.6■□□□□ 0.73
ARHGEF28-202ENST00000296799 U2AF1Q01081 240 aaKnown RBP eCLIP19.6■□□□□ 0.737e-6■■■□□ 19.2
ARHGEF28-202ENST00000296799 RGS3P49796 1198 aa19.59■□□□□ 0.73
ARHGEF28-202ENST00000296799 HMGXB3Q12766 1538 aa19.59■□□□□ 0.73
ARHGEF28-202ENST00000296799 EIF3AQ14152 1382 aaKnown RBP19.59■□□□□ 0.73
ARHGEF28-202ENST00000296799 ANP32BQ92688 251 aaKnown RBP19.58■□□□□ 0.73
ARHGEF28-202ENST00000296799 EID1Q9Y6B2 187 aa19.56■□□□□ 0.72
ARHGEF28-202ENST00000296799 PAK3O75914 559 aaPredicted RBP19.56■□□□□ 0.72
ARHGEF28-202ENST00000296799 MS4A1P11836 297 aa19.56■□□□□ 0.72
ARHGEF28-202ENST00000296799 ARAP1Q96P48 1450 aa19.56■□□□□ 0.72
ARHGEF28-202ENST00000296799 LRRC9Q6ZRR7 1453 aa19.55■□□□□ 0.72
ARHGEF28-202ENST00000296799 TOPBP1Q92547 1522 aa19.55■□□□□ 0.72
ARHGEF28-202ENST00000296799 TERF2IPQ9NYB0 399 aa19.54■□□□□ 0.72
ARHGEF28-202ENST00000296799 CASKIN1Q8WXD9 1431 aa19.54■□□□□ 0.72
ARHGEF28-202ENST00000296799 POLA1P09884 1462 aaPredicted RBP19.53■□□□□ 0.72
ARHGEF28-202ENST00000296799 NLRP13Q86W25 1043 aa19.53■□□□□ 0.72
ARHGEF28-202ENST00000296799 PRXQ9BXM0 1461 aa19.53■□□□□ 0.72
ARHGEF28-202ENST00000296799 CHMP4BQ9H444 224 aaKnown RBP19.52■□□□□ 0.72
ARHGEF28-202ENST00000296799 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
ARHGEF28-202ENST00000296799 ERICH3Q5RHP9 1530 aa19.52■□□□□ 0.72
ARHGEF28-202ENST00000296799 BECN1Q14457 450 aa19.52■□□□□ 0.71
ARHGEF28-202ENST00000296799 CUX1P39880 1505 aa19.51■□□□□ 0.71
ARHGEF28-202ENST00000296799 MRC2Q9UBG0 1479 aa19.51■□□□□ 0.71
ARHGEF28-202ENST00000296799 KIF15Q9NS87 1388 aa19.51■□□□□ 0.71
ARHGEF28-202ENST00000296799 VGFO15240 615 aaPredicted RBP19.5■□□□□ 0.71
ARHGEF28-202ENST00000296799 FAM69CQ0P6D2 419 aa19.5■□□□□ 0.71
ARHGEF28-202ENST00000296799 NUTM2FA1L443 756 aa19.49■□□□□ 0.71
ARHGEF28-202ENST00000296799 RTF1Q92541 710 aaKnown RBP19.49■□□□□ 0.71
ARHGEF28-202ENST00000296799 DDRGK1Q96HY6 314 aa19.49■□□□□ 0.71
ARHGEF28-202ENST00000296799 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
ARHGEF28-202ENST00000296799 NCOA2Q15596 1464 aa19.47■□□□□ 0.71
ARHGEF28-202ENST00000296799 TOP2BQ02880 1626 aa19.47■□□□□ 0.71
ARHGEF28-202ENST00000296799 AFAP1Q8N556 730 aa19.46■□□□□ 0.71
ARHGEF28-202ENST00000296799 PANK3Q9H999 370 aa19.46■□□□□ 0.71
ARHGEF28-202ENST00000296799 IFT140Q96RY7 1462 aa19.45■□□□□ 0.7
ARHGEF28-202ENST00000296799 NGDNQ8NEJ9 315 aaKnown RBP19.45■□□□□ 0.7
ARHGEF28-202ENST00000296799 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
ARHGEF28-202ENST00000296799 RCAN3Q9UKA8 241 aa19.45■□□□□ 0.7
ARHGEF28-202ENST00000296799 USP47Q96K76 1375 aa19.43■□□□□ 0.7
ARHGEF28-202ENST00000296799 ANKRD50Q9ULJ7 1429 aa19.43■□□□□ 0.7
ARHGEF28-202ENST00000296799 UACAQ9BZF9 1416 aa19.43■□□□□ 0.7
ARHGEF28-202ENST00000296799 CASC1Q6TDU7 716 aa19.42■□□□□ 0.7
ARHGEF28-202ENST00000296799 FYCO1Q9BQS8 1478 aa19.41■□□□□ 0.7
ARHGEF28-202ENST00000296799 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.41■□□□□ 0.76e-7■■■□□ 17.7
ARHGEF28-202ENST00000296799 PRDM2Q13029 1718 aa19.41■□□□□ 0.7
ARHGEF28-202ENST00000296799 PRKRIP1Q9H875 184 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF28-202ENST00000296799 OS9Q13438 667 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF28-202ENST00000296799 CCDC146Q8IYE0 955 aa19.39■□□□□ 0.69
ARHGEF28-202ENST00000296799 CSB-PGBD3P0DP91 1061 aa19.38■□□□□ 0.69
ARHGEF28-202ENST00000296799 CALD1Q05682 793 aaKnown RBP19.38■□□□□ 0.69
ARHGEF28-202ENST00000296799 IPO8O15397 1037 aaKnown RBP19.37■□□□□ 0.69
ARHGEF28-202ENST00000296799 GOLGA2Q08379 1002 aa19.37■□□□□ 0.69
ARHGEF28-202ENST00000296799 SYNJ2O15056 1496 aa19.37■□□□□ 0.69
ARHGEF28-202ENST00000296799 MINK1Q8N4C8 1332 aaPredicted RBP19.35■□□□□ 0.69
ARHGEF28-202ENST00000296799 MYBBP1AQ9BQG0 1328 aaKnown RBP19.35■□□□□ 0.69
ARHGEF28-202ENST00000296799 EIF5BO60841 1220 aaKnown RBP19.35■□□□□ 0.69
ARHGEF28-202ENST00000296799 EVC2Q86UK5 1308 aa19.34■□□□□ 0.69
ARHGEF28-202ENST00000296799 SNAPC4Q5SXM2 1469 aa19.34■□□□□ 0.69
ARHGEF28-202ENST00000296799 NPHP1O15259 732 aa19.33■□□□□ 0.69
ARHGEF28-202ENST00000296799 DNMBPQ6XZF7 1577 aa19.33■□□□□ 0.69
ARHGEF28-202ENST00000296799 AMPHP49418 695 aa19.33■□□□□ 0.68
ARHGEF28-202ENST00000296799 RRBP1Q9P2E9 1410 aaKnown RBP19.31■□□□□ 0.68
ARHGEF28-202ENST00000296799 EFCAB5A4FU69 1503 aa19.31■□□□□ 0.68
ARHGEF28-202ENST00000296799 PDE3BQ13370 1112 aa19.31■□□□□ 0.68
ARHGEF28-202ENST00000296799 ERICH6BQ5W0A0 696 aa19.31■□□□□ 0.68
ARHGEF28-202ENST00000296799 GOLGA6L22H0YM25 854 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms